Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.46□□□□□ -0.09
SMIM12Q96EX1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMIM12Q96EX1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.46□□□□□ -0.1
SMIM12Q96EX1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM12Q96EX1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM12Q96EX1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM12Q96EX1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM12Q96EX1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM12Q96EX1 PRORSD1P-202ENST00000563365 2154 ntBASIC14.46□□□□□ -0.1
SMIM12Q96EX1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM12Q96EX1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM12Q96EX1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SMIM12Q96EX1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.46□□□□□ -0.1
SMIM12Q96EX1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 AC104417.2-201ENST00000562989 1793 ntBASIC14.45□□□□□ -0.1
SMIM12Q96EX1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 KRT18P68-201ENST00000392293 1000 ntBASIC14.45□□□□□ -0.1
SMIM12Q96EX1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 KRT19P1-201ENST00000405746 1186 ntBASIC14.45□□□□□ -0.1
SMIM12Q96EX1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 SLC25A6P5-201ENST00000435663 894 ntBASIC14.45□□□□□ -0.1
SMIM12Q96EX1 AC096631.2-201ENST00000436136 790 ntBASIC14.45□□□□□ -0.1
SMIM12Q96EX1 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 MYCNOS-205ENST00000641950 531 ntBASIC14.45□□□□□ -0.1
SMIM12Q96EX1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.45□□□□□ -0.1
SMIM12Q96EX1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 TFP1-202ENST00000475455 1573 ntBASIC14.44□□□□□ -0.1
SMIM12Q96EX1 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 AC123595.1-201ENST00000440769 1046 ntBASIC14.44□□□□□ -0.1
SMIM12Q96EX1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM12Q96EX1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM12Q96EX1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SMIM12Q96EX1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM12Q96EX1 AC008764.6-201ENST00000595909 2069 ntBASIC14.43□□□□□ -0.1
SMIM12Q96EX1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.43□□□□□ -0.1
SMIM12Q96EX1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM12Q96EX1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.43□□□□□ -0.1
SMIM12Q96EX1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM12Q96EX1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM12Q96EX1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms