Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39BQ5VTQ0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 CRYGFP-201ENST00000418459 633 ntBASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 TSPY21P-201ENST00000433481 731 ntBASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 MFAP1P1-201ENST00000442257 1255 ntBASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 LINC01023-201ENST00000606054 436 ntBASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.75■□□□□ 0.75
TTC39BQ5VTQ0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 NAPSB-206ENST00000562112 1266 ntBASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 C2orf69P3-201ENST00000565542 1120 ntBASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.74■□□□□ 0.75
TTC39BQ5VTQ0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 AL390955.1-201ENST00000428694 934 ntBASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.73■□□□□ 0.75
TTC39BQ5VTQ0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 CKBP1-201ENST00000565489 1086 ntBASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.72■□□□□ 0.75
TTC39BQ5VTQ0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms