Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 CLTC-213ENST00000584313 715 ntTSL 313.94□□□□□ -0.182e-8■■■■□ 20.2
RPS3P23396 LAMB2-216ENST00000494831 582 ntTSL 211.66□□□□□ -0.547e-7■■■■□ 20.2
RPS3P23396 PGD-210ENST00000498356 790 ntTSL 36.03□□□□□ -1.448e-8■■■■□ 20.2
RPS3P23396 H2AFZ-202ENST00000511203 1880 ntTSL 229.62■■■□□ 2.332e-7■■■■□ 20.2
RPS3P23396 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.122e-7■■■■□ 20.2
RPS3P23396 H2AFZ-204ENST00000511348 1843 ntTSL 1 (best)13.34□□□□□ -0.272e-7■■■■□ 20.2
RPS3P23396 H2AFZ-206ENST00000529158 726 ntTSL 39.48□□□□□ -0.892e-7■■■■□ 20.2
RPS3P23396 H2AFZ-203ENST00000511319 1254 ntTSL 1 (best)28.13■■■□□ 2.092e-7■■■■□ 20.1
RPS3P23396 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.173e-12■■■■□ 20.1
RPS3P23396 RPS27A-202ENST00000402285 705 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.753e-12■■■■□ 20.1
RPS3P23396 RPS27A-203ENST00000404735 796 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.853e-12■■■■□ 20.1
RPS3P23396 COPS9-203ENST00000489698 640 ntTSL 223.42■■□□□ 1.342e-6■■■■□ 20.1
RPS3P23396 COPS9-204ENST00000491765 619 ntTSL 210.63□□□□□ -0.712e-6■■■■□ 20.1
RPS3P23396 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.14■■□□□ 1.628e-9■■■■□ 20.1
RPS3P23396 EPPK1-201ENST00000568225 15530 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.672e-6■■■■□ 20.1
RPS3P23396 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.842e-6■■■■□ 20.1
RPS3P23396 ARAP1-210ENST00000465814 5612 ntTSL 214.54□□□□□ -0.083e-6■■■■□ 20.1
RPS3P23396 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.163e-6■■■■□ 20.1
RPS3P23396 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.283e-6■■■■□ 20.1
RPS3P23396 ARAP1-205ENST00000426523 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.683e-6■■■■□ 20.1
RPS3P23396 ARAP1-207ENST00000429686 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.853e-6■■■■□ 20.1
RPS3P23396 P4HB-207ENST00000472244 858 ntTSL 518.02■□□□□ 0.488e-21■■■■□ 20.1
RPS3P23396 PSMA4-217ENST00000560033 570 ntTSL 46.99□□□□□ -1.295e-7■■■■□ 20.1
RPS3P23396 DLD-207ENST00000451081 930 ntTSL 1 (best)4.95□□□□□ -1.622e-6■■■■□ 20.1
RPS3P23396 NDUFV1-220ENST00000531250 736 ntTSL 216.95■□□□□ 0.33e-8■■■■□ 20.1
RPS3P23396 ARL6IP1-206ENST00000566391 806 ntTSL 218.28■□□□□ 0.523e-14■■■■□ 20.1
RPS3P23396 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.48■■□□□ 1.197e-10■■■■□ 20.1
RPS3P23396 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.697e-10■■■■□ 20.1
RPS3P23396 CRELD2-208ENST00000482956 855 ntTSL 1 (best)17.27■□□□□ 0.361e-7■■■■□ 20.1
RPS3P23396 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.047e-10■■■■□ 20.1
RPS3P23396 CCDC47-207ENST00000612558 1586 ntTSL 5 BASIC8.84□□□□□ -0.997e-10■■■■□ 20.1
RPS3P23396 CCDC47-205ENST00000582331 693 ntTSL 37.08□□□□□ -1.287e-10■■■■□ 20.1
RPS3P23396 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.066e-7■■■■□ 20.1
RPS3P23396 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.56■□□□□ 0.726e-7■■■■□ 20.1
RPS3P23396 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.386e-7■■■■□ 20.1
RPS3P23396 NDUFS2-203ENST00000465923 1193 ntTSL 313.98□□□□□ -0.174e-7■■■■□ 20.1
RPS3P23396 G6PD-205ENST00000439227 1074 ntTSL 515.32■□□□□ 0.041e-7■■■■□ 20.1
RPS3P23396 G6PD-206ENST00000440967 1056 ntTSL 513.39□□□□□ -0.271e-7■■■■□ 20.1
RPS3P23396 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.012e-21■■■■□ 20.1
RPS3P23396 ADH5-205ENST00000505652 623 ntTSL 56.7□□□□□ -1.347e-8■■■■□ 20.1
RPS3P23396 GOT2-206ENST00000564400 983 ntTSL 311.02□□□□□ -0.651e-6■■■■□ 20.1
RPS3P23396 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.217e-7■■■■□ 20.1
RPS3P23396 CTSL-206ENST00000495822 988 ntTSL 1 (best)14.35□□□□□ -0.117e-7■■■■□ 20.1
RPS3P23396 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.187e-7■■■■□ 20.1
RPS3P23396 HLA-B-256ENST00000639848 1089 ntBASIC19.67■□□□□ 0.745e-7■■■■□ 20.1
RPS3P23396 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.38■□□□□ 0.215e-7■■■■□ 20.1
RPS3P23396 MRPL28-206ENST00000450882 619 ntTSL 315.94■□□□□ 0.142e-8■■■■□ 20.1
RPS3P23396 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.398e-8■■■■□ 20
RPS3P23396 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.29■□□□□ 0.848e-8■■■■□ 20
RPS3P23396 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.07■□□□□ 0.648e-8■■■■□ 20
RPS3P23396 CAPZB-207ENST00000459967 579 ntTSL 316.18■□□□□ 0.188e-8■■■■□ 20
RPS3P23396 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.37■□□□□ 0.058e-8■■■■□ 20
RPS3P23396 CAPZB-208ENST00000482808 660 ntTSL 214.72□□□□□ -0.058e-8■■■■□ 20
RPS3P23396 CAPZB-209ENST00000489607 488 ntTSL 513.84□□□□□ -0.198e-8■■■■□ 20
RPS3P23396 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.318e-8■■■■□ 20
RPS3P23396 CAPZB-206ENST00000457768 432 ntTSL 311.65□□□□□ -0.541e-19■■■■□ 20
RPS3P23396 FGB-204ENST00000497097 574 ntTSL 1 (best)11.35□□□□□ -0.596e-15■■■■□ 20
RPS3P23396 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.673e-7■■■■□ 20
RPS3P23396 FCGR2A-210ENST00000483665 1495 ntTSL 212.09□□□□□ -0.471e-6■■■■□ 20
RPS3P23396 FCGR2A-201ENST00000271450 2412 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.911e-6■■■■□ 20
RPS3P23396 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.191e-6■■■■□ 20
RPS3P23396 GLUL-210ENST00000484996 1369 ntTSL 320.62■□□□□ 0.891e-12■■■■□ 20
RPS3P23396 LAMB2-209ENST00000480640 563 ntTSL 314.42□□□□□ -0.11e-9■■■■□ 20
RPS3P23396 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.16■□□□□ 0.183e-18■■■■□ 20
RPS3P23396 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.683e-18■■■■□ 20
RPS3P23396 TMEM189-204ENST00000371658 813 ntTSL 319.95■□□□□ 0.785e-8■■■■□ 20
RPS3P23396 TMEM189-205ENST00000453505 2028 ntTSL 1 (best)19.77■□□□□ 0.765e-8■■■■□ 20
RPS3P23396 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.75e-8■■■■□ 20
RPS3P23396 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.245e-8■■■■□ 20
RPS3P23396 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.195e-8■■■■□ 20
RPS3P23396 COPZ1-208ENST00000550027 553 ntTSL 1 (best)8.29□□□□□ -1.086e-9■■■■□ 20
RPS3P23396 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.393e-7■■■■□ 20
RPS3P23396 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.333e-7■■■■□ 20
RPS3P23396 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.233e-7■■■■□ 20
RPS3P23396 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.533e-7■■■■□ 20
RPS3P23396 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.583e-7■■■■□ 20
RPS3P23396 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.79□□□□□ -1.323e-7■■■■□ 20
RPS3P23396 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.7□□□□□ -1.53e-7■■■■□ 20
RPS3P23396 HLA-C-204ENST00000415537 782 nt24.1■■□□□ 1.451e-7■■■■□ 20
RPS3P23396 HLA-C-209ENST00000495835 1073 nt23.46■■□□□ 1.351e-7■■■■□ 20
RPS3P23396 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.65□□□□□ -1.346e-16■■■■□ 20
RPS3P23396 TMED9-204ENST00000507723 1018 ntTSL 214.01□□□□□ -0.179e-13■■■■□ 20
RPS3P23396 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.273e-7■■■■□ 20
RPS3P23396 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.333e-6■■■■□ 20
RPS3P23396 RBBP4-208ENST00000463378 882 ntTSL 54.18□□□□□ -1.749e-7■■■■□ 20
RPS3P23396 PLK1-206ENST00000564947 553 ntTSL 310.97□□□□□ -0.655e-28■■■■□ 20
RPS3P23396 SLC25A3-210ENST00000548480 722 ntTSL 21.35□□□□□ -2.197e-10■■■■□ 20
RPS3P23396 PARK7-207ENST00000469225 711 ntTSL 39.03□□□□□ -0.961e-6■■■■□ 20
RPS3P23396 GOT1-203ENST00000489349 646 ntTSL 25.71□□□□□ -1.51e-10■■■■□ 20
RPS3P23396 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -02e-21■■■■□ 20
RPS3P23396 SERPINA3-202ENST00000393080 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.572e-21■■■■□ 20
RPS3P23396 SERPINA3-201ENST00000393078 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.582e-21■■■■□ 20
RPS3P23396 SERPINA3-208ENST00000556968 1289 ntTSL 1 (best)10.66□□□□□ -0.72e-21■■■■□ 20
RPS3P23396 HADHA-204ENST00000492433 752 ntTSL 29.91□□□□□ -0.825e-10■■■■□ 20
RPS3P23396 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.193e-17■■■■□ 20
RPS3P23396 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC11.34□□□□□ -0.593e-17■■■■□ 20
RPS3P23396 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC10.73□□□□□ -0.693e-17■■■■□ 20
RPS3P23396 AL645922.1-202ENST00000477310 3377 ntTSL 5 BASIC10.73□□□□□ -0.692e-7■■■■□ 20
RPS3P23396 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.89□□□□□ -0.192e-9■■■■□ 20
RPS3P23396 COX4I1-207ENST00000564648 1235 ntTSL 58.71□□□□□ -1.022e-9■■■■□ 20
Retrieved 100 of 24,271 protein–RNA pairs in 185.7 ms