RNA–Protein interactions for RNA: ENST00000564648.1

COX4I1-207, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 5

Gene COX4I1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-207ENST00000564648 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
COX4I1-207ENST00000564648 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
COX4I1-207ENST00000564648 NISCHQ9Y2I1 1504 aa20.22■□□□□ 0.83
COX4I1-207ENST00000564648 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
COX4I1-207ENST00000564648 SENP3Q9H4L4 574 aaPredicted RBP18.91■□□□□ 0.62
COX4I1-207ENST00000564648 ABCC9O60706 1549 aa18.13■□□□□ 0.49
COX4I1-207ENST00000564648 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
COX4I1-207ENST00000564648 CCDC180Q9P1Z9 1646 aa17.72■□□□□ 0.43
COX4I1-207ENST00000564648 FOXD1Q16676 465 aa17.54■□□□□ 0.4
COX4I1-207ENST00000564648 DNAJC5BQ9UF47 199 aa17.4■□□□□ 0.38
COX4I1-207ENST00000564648 ADRA2BP18089 450 aa17.19■□□□□ 0.34
COX4I1-207ENST00000564648 PPP6R1Q9UPN7 881 aa17.15■□□□□ 0.34
COX4I1-207ENST00000564648 RB1CC1Q8TDY2 1594 aa17.06■□□□□ 0.32
COX4I1-207ENST00000564648 ZCCHC6Q5VYS8 1495 aaKnown RBP16.98■□□□□ 0.31
COX4I1-207ENST00000564648 NACADO15069 1562 aa16.84■□□□□ 0.29
COX4I1-207ENST00000564648 PABPN1Q86U42 306 aaKnown RBP eCLIP16.76■□□□□ 0.27
COX4I1-207ENST00000564648 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
COX4I1-207ENST00000564648 UNC13AQ9UPW8 1703 aa16.71■□□□□ 0.27
COX4I1-207ENST00000564648 PIAS4Q8N2W9 510 aaPredicted RBP16.66■□□□□ 0.26
COX4I1-207ENST00000564648 DCAF8L2P0C7V8 631 aa16.62■□□□□ 0.25
COX4I1-207ENST00000564648 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
COX4I1-207ENST00000564648 MYO15BQ96JP2 1530 aa16.59■□□□□ 0.25
COX4I1-207ENST00000564648 CECR2Q9BXF3 1484 aa16.38■□□□□ 0.21
COX4I1-207ENST00000564648 CC2D2AQ9P2K1 1620 aa16.37■□□□□ 0.21
COX4I1-207ENST00000564648 SHROOM4Q9ULL8 1493 aa16.36■□□□□ 0.21
COX4I1-207ENST00000564648 DNAJC5Q9H3Z4 198 aa16.32■□□□□ 0.2
COX4I1-207ENST00000564648 EIF4G1Q04637 1599 aaKnown RBP16.23■□□□□ 0.19
COX4I1-207ENST00000564648 SCRIBQ14160 1630 aa16.19■□□□□ 0.18
COX4I1-207ENST00000564648 KCNA4P22459 653 aa16.04■□□□□ 0.16
COX4I1-207ENST00000564648 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
COX4I1-207ENST00000564648 MSH5O43196 834 aa16.02■□□□□ 0.16
COX4I1-207ENST00000564648 CUX2O14529 1486 aa15.84■□□□□ 0.13
COX4I1-207ENST00000564648 NCBP3Q53F19 620 aaKnown RBP15.7■□□□□ 0.1
COX4I1-207ENST00000564648 ERCC6Q03468 1493 aa15.68■□□□□ 0.1
COX4I1-207ENST00000564648 SUPT5HO00267 1087 aaKnown RBP15.68■□□□□ 0.1
COX4I1-207ENST00000564648 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
COX4I1-207ENST00000564648 SCAF1Q9H7N4 1312 aaKnown RBP15.67■□□□□ 0.1
COX4I1-207ENST00000564648 MROH2BQ7Z745 1585 aa15.62■□□□□ 0.09
COX4I1-207ENST00000564648 BAZ1AQ9NRL2 1556 aaPredicted RBP15.59■□□□□ 0.09
COX4I1-207ENST00000564648 SMARCA4P51532 1647 aa15.54■□□□□ 0.08
COX4I1-207ENST00000564648 NCAPD3P42695 1498 aa15.53■□□□□ 0.08
COX4I1-207ENST00000564648 MAPK8IP2Q13387 824 aaPredicted RBP15.51■□□□□ 0.07
COX4I1-207ENST00000564648 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
COX4I1-207ENST00000564648 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
COX4I1-207ENST00000564648 WIZO95785 1651 aa15.45■□□□□ 0.06
COX4I1-207ENST00000564648 NESP48681 1621 aa15.44■□□□□ 0.06
COX4I1-207ENST00000564648 ATAD2BQ9ULI0 1458 aa15.43■□□□□ 0.06
COX4I1-207ENST00000564648 THOC2Q8NI27 1593 aaKnown RBP15.43■□□□□ 0.06
COX4I1-207ENST00000564648 HMGXB3Q12766 1538 aa15.41■□□□□ 0.06
COX4I1-207ENST00000564648 TRIM41Q8WV44 630 aa15.4■□□□□ 0.06
COX4I1-207ENST00000564648 PEG3Q9GZU2 1588 aa15.4■□□□□ 0.06
COX4I1-207ENST00000564648 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
COX4I1-207ENST00000564648 EHMT2Q96KQ7 1210 aa15.35■□□□□ 0.05
COX4I1-207ENST00000564648 SLC4A1APQ9BWU0 796 aaKnown RBP15.35■□□□□ 0.05
COX4I1-207ENST00000564648 TOP2AP11388 1531 aaKnown RBP15.32■□□□□ 0.04
COX4I1-207ENST00000564648 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
COX4I1-207ENST00000564648 KIF21AQ7Z4S6 1674 aa15.25■□□□□ 0.03
COX4I1-207ENST00000564648 BAZ1BQ9UIG0 1483 aaKnown RBP15.25■□□□□ 0.03
COX4I1-207ENST00000564648 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
COX4I1-207ENST00000564648 CCDC88BA6NC98 1476 aa15.17■□□□□ 0.02
COX4I1-207ENST00000564648 DMRT2Q9Y5R5 561 aa15.13■□□□□ 0.01
COX4I1-207ENST00000564648 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
COX4I1-207ENST00000564648 WDR62O43379 1518 aa15.09■□□□□ 0.01
COX4I1-207ENST00000564648 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
COX4I1-207ENST00000564648 CADPSQ9ULU8 1353 aa15.03■□□□□ -0
COX4I1-207ENST00000564648 OSCARQ8IYS5 282 aa14.97□□□□□ -0.01
COX4I1-207ENST00000564648 CEP164Q9UPV0 1460 aa14.94□□□□□ -0.02
COX4I1-207ENST00000564648 CSRNP3Q8WYN3 585 aa14.92□□□□□ -0.02
COX4I1-207ENST00000564648 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
COX4I1-207ENST00000564648 RIMBP3CA6NJZ7 1639 aa14.9□□□□□ -0.02
COX4I1-207ENST00000564648 RIMBP3BA6NNM3 1639 aa14.9□□□□□ -0.02
COX4I1-207ENST00000564648 RIMBP3Q9UFD9 1639 aa14.9□□□□□ -0.02
COX4I1-207ENST00000564648 FANCD2Q9BXW9 1451 aa14.87□□□□□ -0.03
COX4I1-207ENST00000564648 CFTRP13569 1480 aa14.86□□□□□ -0.03
COX4I1-207ENST00000564648 ARHGEF11O15085 1522 aa14.8□□□□□ -0.04
COX4I1-207ENST00000564648 URB2Q14146 1524 aaKnown RBP14.79□□□□□ -0.04
COX4I1-207ENST00000564648 ABCC8Q09428 1581 aa14.78□□□□□ -0.04
COX4I1-207ENST00000564648 ZBTB22O15209 634 aa14.74□□□□□ -0.05
COX4I1-207ENST00000564648 WRNQ14191 1432 aaPredicted RBP eCLIP14.71□□□□□ -0.05
COX4I1-207ENST00000564648 PRDM2Q13029 1718 aa14.69□□□□□ -0.06
COX4I1-207ENST00000564648 ZNF608Q9ULD9 1512 aaPredicted RBP14.68□□□□□ -0.06
COX4I1-207ENST00000564648 SYNJ1O43426 1573 aa14.67□□□□□ -0.06
COX4I1-207ENST00000564648 DCAF8L1A6NGE4 600 aa14.65□□□□□ -0.06
COX4I1-207ENST00000564648 CYB5RLQ6IPT4 315 aa14.65□□□□□ -0.06
COX4I1-207ENST00000564648 IFT140Q96RY7 1462 aa14.64□□□□□ -0.07
COX4I1-207ENST00000564648 FOXD4L1Q9NU39 408 aa14.64□□□□□ -0.07
COX4I1-207ENST00000564648 TRHP20396 242 aaPredicted RBP14.63□□□□□ -0.07
COX4I1-207ENST00000564648 ARAP1Q96P48 1450 aa14.63□□□□□ -0.07
COX4I1-207ENST00000564648 CUX1P39880 1505 aa14.61□□□□□ -0.07
COX4I1-207ENST00000564648 TOP2BQ02880 1626 aa14.61□□□□□ -0.07
COX4I1-207ENST00000564648 EIF4G3O43432 1585 aaKnown RBP14.6□□□□□ -0.07
COX4I1-207ENST00000564648 BIVM-ERCC5R4GMW8 1640 aa14.59□□□□□ -0.07
COX4I1-207ENST00000564648 CHD1O14646 1710 aa14.58□□□□□ -0.08
COX4I1-207ENST00000564648 TOPBP1Q92547 1522 aa14.55□□□□□ -0.08
COX4I1-207ENST00000564648 SOGA1O94964 1423 aa14.51□□□□□ -0.09
COX4I1-207ENST00000564648 SLC4A2P04920 1241 aa14.51□□□□□ -0.09
COX4I1-207ENST00000564648 DNMBPQ6XZF7 1577 aa14.49□□□□□ -0.09
COX4I1-207ENST00000564648 RUSC2Q8N2Y8 1516 aa14.48□□□□□ -0.09
COX4I1-207ENST00000564648 FAM9AQ8IZU1 332 aaPredicted RBP14.47□□□□□ -0.09
COX4I1-207ENST00000564648 TARBP1Q13395 1621 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms