RNA–Protein interactions for RNA: ENST00000463378.5

RBBP4-208, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-208ENST00000463378 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
RBBP4-208ENST00000463378 AEBP2Q6ZN18 517 aaPredicted RBP21.82■■□□□ 1.08
RBBP4-208ENST00000463378 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
RBBP4-208ENST00000463378 SENP3Q9H4L4 574 aaPredicted RBP18.53■□□□□ 0.56
RBBP4-208ENST00000463378 PLPPR3Q6T4P5 718 aa18.43■□□□□ 0.54
RBBP4-208ENST00000463378 ADRA2BP18089 450 aa17.1■□□□□ 0.33
RBBP4-208ENST00000463378 FOXD1Q16676 465 aa17.01■□□□□ 0.31
RBBP4-208ENST00000463378 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
RBBP4-208ENST00000463378 KCNA4P22459 653 aa16.79■□□□□ 0.28
RBBP4-208ENST00000463378 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
RBBP4-208ENST00000463378 PIAS4Q8N2W9 510 aaPredicted RBP16.32■□□□□ 0.2
RBBP4-208ENST00000463378 PPP4R3CPQ6ZMV5 832 aa16.3■□□□□ 0.2
RBBP4-208ENST00000463378 SLC4A1APQ9BWU0 796 aaKnown RBP16.2■□□□□ 0.18
RBBP4-208ENST00000463378 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
RBBP4-208ENST00000463378 CSRNP3Q8WYN3 585 aa16.01■□□□□ 0.15
RBBP4-208ENST00000463378 NPM3O75607 178 aaKnown RBP15.85■□□□□ 0.13
RBBP4-208ENST00000463378 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
RBBP4-208ENST00000463378 CNKSR2Q8WXI2 1034 aa15.7■□□□□ 0.1
RBBP4-208ENST00000463378 MSH5O43196 834 aa15.49■□□□□ 0.07
RBBP4-208ENST00000463378 ZBTB22O15209 634 aa15.4■□□□□ 0.06
RBBP4-208ENST00000463378 FOXD4L1Q9NU39 408 aa15.29■□□□□ 0.04
RBBP4-208ENST00000463378 DNAJC5BQ9UF47 199 aa15.26■□□□□ 0.03
RBBP4-208ENST00000463378 RNF216Q9NWF9 866 aaPredicted RBP15.18■□□□□ 0.02
RBBP4-208ENST00000463378 MAPK8IP2Q13387 824 aaPredicted RBP15.17■□□□□ 0.02
RBBP4-208ENST00000463378 DMRT2Q9Y5R5 561 aa14.88□□□□□ -0.03
RBBP4-208ENST00000463378 HOXD11P31277 338 aaPredicted RBP14.87□□□□□ -0.03
RBBP4-208ENST00000463378 SLC4A2P04920 1241 aa14.72□□□□□ -0.05
RBBP4-208ENST00000463378 ATXN8OSP0DMR3 200 aa14.7□□□□□ -0.06
RBBP4-208ENST00000463378 MYCNP04198 464 aaPredicted RBP14.69□□□□□ -0.06
RBBP4-208ENST00000463378 AMER1Q5JTC6 1135 aaPredicted RBP14.68□□□□□ -0.06
RBBP4-208ENST00000463378 RTN4Q9NQC3 1192 aaKnown RBP14.56□□□□□ -0.08
RBBP4-208ENST00000463378 SLC24A1O60721 1099 aa14.53□□□□□ -0.08
RBBP4-208ENST00000463378 FKBP8Q14318 412 aa14.5□□□□□ -0.09
RBBP4-208ENST00000463378 DCAF8L1A6NGE4 600 aa14.27□□□□□ -0.13
RBBP4-208ENST00000463378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
RBBP4-208ENST00000463378 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.13
RBBP4-208ENST00000463378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.131e-7■□□□□ 8.2
RBBP4-208ENST00000463378 SAMD1Q6SPF0 538 aaPredicted RBP14.21□□□□□ -0.13
RBBP4-208ENST00000463378 ATF5Q9Y2D1 282 aaPredicted RBP14.11□□□□□ -0.15
RBBP4-208ENST00000463378 U3KPZ7 1027 aaPredicted RBP14.03□□□□□ -0.16
RBBP4-208ENST00000463378 APLP2Q06481 763 aa13.97□□□□□ -0.17
RBBP4-208ENST00000463378 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
RBBP4-208ENST00000463378 FBXO3Q9UK99 471 aa13.85□□□□□ -0.19
RBBP4-208ENST00000463378 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
RBBP4-208ENST00000463378 SPDYE4A6NLX3 237 aa13.74□□□□□ -0.21
RBBP4-208ENST00000463378 FBLN2P98095 1184 aa13.65□□□□□ -0.22
RBBP4-208ENST00000463378 VASPP50552 380 aaPredicted RBP13.56□□□□□ -0.24
RBBP4-208ENST00000463378 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
RBBP4-208ENST00000463378 PROM2Q8N271 834 aa13.54□□□□□ -0.24
RBBP4-208ENST00000463378 TRHP20396 242 aaPredicted RBP13.5□□□□□ -0.25
RBBP4-208ENST00000463378 PLCB2Q00722 1185 aa13.47□□□□□ -0.25
RBBP4-208ENST00000463378 POLA2Q14181 598 aa13.44□□□□□ -0.26
RBBP4-208ENST00000463378 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
RBBP4-208ENST00000463378 CAPN15O75808 1086 aa13.39□□□□□ -0.27
RBBP4-208ENST00000463378 IFNLR1Q8IU57 520 aaPredicted RBP13.38□□□□□ -0.27
RBBP4-208ENST00000463378 SPINK5Q9NQ38 1064 aaPredicted RBP13.38□□□□□ -0.27
RBBP4-208ENST00000463378 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
RBBP4-208ENST00000463378 HAP1P54257 671 aaPredicted RBP13.32□□□□□ -0.28
RBBP4-208ENST00000463378 RNF39Q9H2S5 420 aa13.27□□□□□ -0.29
RBBP4-208ENST00000463378 PKD2Q13563 968 aa13.23□□□□□ -0.29
RBBP4-208ENST00000463378 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
RBBP4-208ENST00000463378 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
RBBP4-208ENST00000463378 SPOCK2Q92563 424 aa13.17□□□□□ -0.3
RBBP4-208ENST00000463378 ABCB7O75027 752 aa13.15□□□□□ -0.3
RBBP4-208ENST00000463378 BCANQ96GW7 911 aa13.14□□□□□ -0.31
RBBP4-208ENST00000463378 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.14□□□□□ -0.31
RBBP4-208ENST00000463378 STAG3Q9UJ98 1225 aa13.13□□□□□ -0.31
RBBP4-208ENST00000463378 VSIG10Q8N0Z9 540 aa13.12□□□□□ -0.31
RBBP4-208ENST00000463378 ECM2O94769 699 aaPredicted RBP13.1□□□□□ -0.31
RBBP4-208ENST00000463378 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
RBBP4-208ENST00000463378 PLCD3Q8N3E9 789 aa13.06□□□□□ -0.32
RBBP4-208ENST00000463378 BBXQ8WY36 941 aaPredicted RBP13.06□□□□□ -0.32
RBBP4-208ENST00000463378 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
RBBP4-208ENST00000463378 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
RBBP4-208ENST00000463378 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
RBBP4-208ENST00000463378 MIER1Q8N108 512 aa12.96□□□□□ -0.33
RBBP4-208ENST00000463378 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
RBBP4-208ENST00000463378 PAXIP1Q6ZW49 1069 aaPredicted RBP12.95□□□□□ -0.34
RBBP4-208ENST00000463378 SSUH2Q9Y2M2 353 aa12.95□□□□□ -0.34
RBBP4-208ENST00000463378 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
RBBP4-208ENST00000463378 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
RBBP4-208ENST00000463378 PABPN1Q86U42 306 aaKnown RBP eCLIP12.93□□□□□ -0.34
RBBP4-208ENST00000463378 ZBTB47Q9UFB7 747 aaPredicted RBP12.92□□□□□ -0.34
RBBP4-208ENST00000463378 DSG3P32926 999 aa12.9□□□□□ -0.34
RBBP4-208ENST00000463378 TAOK2Q9UL54 1235 aa12.88□□□□□ -0.35
RBBP4-208ENST00000463378 RGL2O15211 777 aa12.87□□□□□ -0.35
RBBP4-208ENST00000463378 NPM1P06748 294 aaKnown RBP eCLIP12.87□□□□□ -0.35
RBBP4-208ENST00000463378 SPRYD3Q8NCJ5 442 aa12.86□□□□□ -0.35
RBBP4-208ENST00000463378 CIZ1Q9ULV3 898 aaPredicted RBP12.85□□□□□ -0.35
RBBP4-208ENST00000463378 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
RBBP4-208ENST00000463378 PRKCSHP14314 528 aaPredicted RBP12.79□□□□□ -0.36
RBBP4-208ENST00000463378 TRIM41Q8WV44 630 aa12.79□□□□□ -0.36
RBBP4-208ENST00000463378 CHGAP10645 457 aaKnown RBP12.77□□□□□ -0.37
RBBP4-208ENST00000463378 TPRNQ4KMQ1 711 aa12.7□□□□□ -0.38
RBBP4-208ENST00000463378 TSHZ2Q9NRE2 1034 aa12.69□□□□□ -0.38
RBBP4-208ENST00000463378 GSE1Q14687 1217 aa12.66□□□□□ -0.38
RBBP4-208ENST00000463378 HS6ST3Q8IZP7 471 aa12.63□□□□□ -0.39
RBBP4-208ENST00000463378 NBR1Q14596 966 aa12.59□□□□□ -0.39
RBBP4-208ENST00000463378 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
RBBP4-208ENST00000463378 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms