Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
C4BPAP04003 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C4BPAP04003 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C4BPAP04003 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
C4BPAP04003 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
C4BPAP04003 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C4BPAP04003 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C4BPAP04003 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.37■□□□□ 0.85
C4BPAP04003 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C4BPAP04003 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C4BPAP04003 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C4BPAP04003 INGX-201ENST00000359239 846 ntBASIC20.37■□□□□ 0.85
C4BPAP04003 AC087499.1-201ENST00000418141 1075 ntBASIC20.37■□□□□ 0.85
C4BPAP04003 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.37■□□□□ 0.85
C4BPAP04003 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C4BPAP04003 AL353719.1-201ENST00000566847 864 ntBASIC20.37■□□□□ 0.85
C4BPAP04003 AC083906.6-201ENST00000641366 219 ntBASIC20.37■□□□□ 0.85
C4BPAP04003 CROCCP3-202ENST00000420820 1947 ntBASIC20.37■□□□□ 0.85
C4BPAP04003 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.37■□□□□ 0.85
C4BPAP04003 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
C4BPAP04003 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C4BPAP04003 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.37■□□□□ 0.85
C4BPAP04003 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C4BPAP04003 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C4BPAP04003 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C4BPAP04003 AC092338.2-201ENST00000568827 1415 ntBASIC20.36■□□□□ 0.85
C4BPAP04003 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C4BPAP04003 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C4BPAP04003 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C4BPAP04003 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C4BPAP04003 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C4BPAP04003 TNXA-203ENST00000507684 2038 ntBASIC20.36■□□□□ 0.85
C4BPAP04003 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
C4BPAP04003 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C4BPAP04003 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C4BPAP04003 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C4BPAP04003 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.36■□□□□ 0.85
C4BPAP04003 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
C4BPAP04003 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.36■□□□□ 0.85
C4BPAP04003 EGLN1P1-201ENST00000531623 762 ntBASIC20.36■□□□□ 0.85
C4BPAP04003 NAPSB-206ENST00000562112 1266 ntBASIC20.36■□□□□ 0.85
C4BPAP04003 C2orf69P3-201ENST00000565542 1120 ntBASIC20.36■□□□□ 0.85
C4BPAP04003 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.36■□□□□ 0.85
C4BPAP04003 AC068587.9-201ENST00000641814 219 ntBASIC20.36■□□□□ 0.85
C4BPAP04003 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
C4BPAP04003 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
C4BPAP04003 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.36■□□□□ 0.85
C4BPAP04003 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
C4BPAP04003 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.35■□□□□ 0.85
C4BPAP04003 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
C4BPAP04003 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
C4BPAP04003 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.35■□□□□ 0.85
C4BPAP04003 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
C4BPAP04003 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.35■□□□□ 0.85
C4BPAP04003 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.35■□□□□ 0.85
C4BPAP04003 TSPY17P-201ENST00000450329 467 ntBASIC20.35■□□□□ 0.85
C4BPAP04003 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.35■□□□□ 0.85
C4BPAP04003 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.35■□□□□ 0.85
C4BPAP04003 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
C4BPAP04003 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
C4BPAP04003 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.35■□□□□ 0.85
C4BPAP04003 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
C4BPAP04003 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
C4BPAP04003 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
C4BPAP04003 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
C4BPAP04003 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.35■□□□□ 0.85
C4BPAP04003 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
C4BPAP04003 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C4BPAP04003 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
C4BPAP04003 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.34■□□□□ 0.85
C4BPAP04003 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
C4BPAP04003 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
C4BPAP04003 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
C4BPAP04003 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
C4BPAP04003 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
C4BPAP04003 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.34■□□□□ 0.85
C4BPAP04003 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C4BPAP04003 AC007663.1-201ENST00000438948 1240 ntBASIC20.34■□□□□ 0.85
C4BPAP04003 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.34■□□□□ 0.85
C4BPAP04003 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C4BPAP04003 AC073912.3-201ENST00000624414 853 ntBASIC20.34■□□□□ 0.85
C4BPAP04003 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C4BPAP04003 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.34■□□□□ 0.85
C4BPAP04003 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.34■□□□□ 0.85
C4BPAP04003 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C4BPAP04003 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C4BPAP04003 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
C4BPAP04003 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.33■□□□□ 0.85
C4BPAP04003 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
C4BPAP04003 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
C4BPAP04003 HEIH-201ENST00000623091 1652 ntBASIC20.33■□□□□ 0.85
C4BPAP04003 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
C4BPAP04003 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
C4BPAP04003 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.33■□□□□ 0.85
C4BPAP04003 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
C4BPAP04003 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.33■□□□□ 0.85
C4BPAP04003 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.33■□□□□ 0.85
C4BPAP04003 AP003041.3-201ENST00000527151 707 ntBASIC20.33■□□□□ 0.85
C4BPAP04003 AC116562.4-202ENST00000641738 218 ntBASIC20.33■□□□□ 0.85
C4BPAP04003 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms