Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CBX6O95503 AC139713.2-201ENST00000641328 2723 ntBASIC18.89■□□□□ 0.62
CBX6O95503 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.89■□□□□ 0.61
CBX6O95503 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX6O95503 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX6O95503 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX6O95503 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CBX6O95503 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX6O95503 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CBX6O95503 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX6O95503 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CBX6O95503 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.89■□□□□ 0.61
CBX6O95503 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.89■□□□□ 0.61
CBX6O95503 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CBX6O95503 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX6O95503 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.89■□□□□ 0.61
CBX6O95503 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX6O95503 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CBX6O95503 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CBX6O95503 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CBX6O95503 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX6O95503 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.89■□□□□ 0.61
CBX6O95503 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX6O95503 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX6O95503 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CBX6O95503 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX6O95503 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX6O95503 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX6O95503 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX6O95503 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CBX6O95503 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CBX6O95503 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX6O95503 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CBX6O95503 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX6O95503 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX6O95503 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX6O95503 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX6O95503 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX6O95503 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX6O95503 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX6O95503 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX6O95503 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.88■□□□□ 0.61
CBX6O95503 AC008403.3-201ENST00000598924 454 ntBASIC18.88■□□□□ 0.61
CBX6O95503 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX6O95503 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CBX6O95503 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX6O95503 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX6O95503 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX6O95503 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX6O95503 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX6O95503 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX6O95503 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX6O95503 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX6O95503 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
CBX6O95503 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CBX6O95503 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX6O95503 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CBX6O95503 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.87■□□□□ 0.61
CBX6O95503 AC106820.2-201ENST00000563775 3264 ntBASIC18.87■□□□□ 0.61
CBX6O95503 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX6O95503 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX6O95503 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX6O95503 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX6O95503 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CBX6O95503 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX6O95503 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX6O95503 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX6O95503 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX6O95503 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.87■□□□□ 0.61
CBX6O95503 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX6O95503 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CBX6O95503 CDV3P1-201ENST00000471403 739 ntBASIC18.87■□□□□ 0.61
CBX6O95503 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.87■□□□□ 0.61
CBX6O95503 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.87■□□□□ 0.61
CBX6O95503 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.87■□□□□ 0.61
CBX6O95503 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX6O95503 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX6O95503 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.87■□□□□ 0.61
CBX6O95503 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX6O95503 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CBX6O95503 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.87■□□□□ 0.61
CBX6O95503 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.87■□□□□ 0.61
CBX6O95503 PHGDH-210ENST00000641115 1638 ntBASIC18.87■□□□□ 0.61
CBX6O95503 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX6O95503 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX6O95503 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX6O95503 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX6O95503 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
CBX6O95503 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX6O95503 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX6O95503 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX6O95503 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CBX6O95503 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX6O95503 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.86■□□□□ 0.61
CBX6O95503 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX6O95503 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX6O95503 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX6O95503 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX6O95503 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.86■□□□□ 0.61
CBX6O95503 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms