Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM38O00635 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TRIM38O00635 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM38O00635 NEFHP1-201ENST00000412845 2629 ntBASIC19.07■□□□□ 0.64
TRIM38O00635 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM38O00635 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM38O00635 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM38O00635 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM38O00635 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM38O00635 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
TRIM38O00635 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM38O00635 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM38O00635 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRIM38O00635 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM38O00635 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.07■□□□□ 0.64
TRIM38O00635 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM38O00635 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.07■□□□□ 0.64
TRIM38O00635 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.07■□□□□ 0.64
TRIM38O00635 FAM87A-204ENST00000613235 858 ntBASIC19.07■□□□□ 0.64
TRIM38O00635 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
TRIM38O00635 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM38O00635 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM38O00635 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.07■□□□□ 0.64
TRIM38O00635 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM38O00635 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM38O00635 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM38O00635 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM38O00635 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM38O00635 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM38O00635 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 RCC2P6-201ENST00000526625 1557 ntBASIC19.06■□□□□ 0.64
TRIM38O00635 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
TRIM38O00635 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM38O00635 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.06■□□□□ 0.64
TRIM38O00635 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM38O00635 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.06■□□□□ 0.64
TRIM38O00635 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 AP000692.2-201ENST00000608391 879 ntBASIC19.06■□□□□ 0.64
TRIM38O00635 HLA-A-209ENST00000638375 975 ntBASIC19.06■□□□□ 0.64
TRIM38O00635 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
TRIM38O00635 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM38O00635 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM38O00635 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRIM38O00635 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
TRIM38O00635 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM38O00635 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM38O00635 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM38O00635 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM38O00635 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRIM38O00635 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM38O00635 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM38O00635 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM38O00635 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM38O00635 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRIM38O00635 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRIM38O00635 AC087388.1-201ENST00000571370 1112 ntBASIC19.05■□□□□ 0.64
TRIM38O00635 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM38O00635 AC011298.2-201ENST00000617989 482 ntBASIC19.05■□□□□ 0.64
TRIM38O00635 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM38O00635 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM38O00635 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
TRIM38O00635 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM38O00635 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM38O00635 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM38O00635 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM38O00635 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM38O00635 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM38O00635 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM38O00635 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.04■□□□□ 0.64
TRIM38O00635 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM38O00635 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms