Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.9■□□□□ 0.3
CLCF1Q9UBD9 NTF6B-201ENST00000591913 560 ntBASIC16.9■□□□□ 0.3
CLCF1Q9UBD9 AC008622.2-201ENST00000617006 1229 ntBASIC16.9■□□□□ 0.3
CLCF1Q9UBD9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.9■□□□□ 0.3
CLCF1Q9UBD9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCF1Q9UBD9 TEX21P-204ENST00000641479 1693 ntBASIC16.9■□□□□ 0.3
CLCF1Q9UBD9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLCF1Q9UBD9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCF1Q9UBD9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCF1Q9UBD9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CLCF1Q9UBD9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLCF1Q9UBD9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLCF1Q9UBD9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CLCF1Q9UBD9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CLCF1Q9UBD9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLCF1Q9UBD9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.89■□□□□ 0.29
CLCF1Q9UBD9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 FAM8A6P-201ENST00000407496 1135 ntBASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 LINC01238-205ENST00000567549 1107 ntBASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 AL031432.5-201ENST00000641059 760 ntBASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCF1Q9UBD9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 AL158211.5-201ENST00000623583 2518 ntBASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 TSPY5P-201ENST00000426936 936 ntBASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 AC011558.1-201ENST00000623459 338 ntBASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 AL023973.1-201ENST00000624619 620 ntBASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CLCF1Q9UBD9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms