Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.42■□□□□ 0.06
RAB40CQ96S21 AC008694.1-202ENST00000636953 945 ntBASIC15.42■□□□□ 0.06
RAB40CQ96S21 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40CQ96S21 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40CQ96S21 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40CQ96S21 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40CQ96S21 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40CQ96S21 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40CQ96S21 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.42■□□□□ 0.06
RAB40CQ96S21 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40CQ96S21 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40CQ96S21 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.42■□□□□ 0.06
RAB40CQ96S21 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.42■□□□□ 0.06
RAB40CQ96S21 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40CQ96S21 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40CQ96S21 AC068338.2-201ENST00000563278 1430 ntBASIC15.42■□□□□ 0.06
RAB40CQ96S21 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.42■□□□□ 0.06
RAB40CQ96S21 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.41■□□□□ 0.06
RAB40CQ96S21 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40CQ96S21 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
RAB40CQ96S21 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.41■□□□□ 0.06
RAB40CQ96S21 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.41■□□□□ 0.06
RAB40CQ96S21 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RAB40CQ96S21 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40CQ96S21 AC073592.3-201ENST00000625118 1834 ntBASIC15.41■□□□□ 0.06
RAB40CQ96S21 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40CQ96S21 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB40CQ96S21 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RAB40CQ96S21 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40CQ96S21 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RAB40CQ96S21 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40CQ96S21 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.41■□□□□ 0.06
RAB40CQ96S21 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40CQ96S21 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40CQ96S21 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40CQ96S21 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40CQ96S21 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40CQ96S21 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40CQ96S21 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40CQ96S21 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40CQ96S21 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40CQ96S21 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RAB40CQ96S21 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40CQ96S21 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RAB40CQ96S21 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
RAB40CQ96S21 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB40CQ96S21 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB40CQ96S21 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RAB40CQ96S21 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB40CQ96S21 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB40CQ96S21 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB40CQ96S21 AL355472.2-201ENST00000422958 438 ntBASIC15.4■□□□□ 0.06
RAB40CQ96S21 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB40CQ96S21 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB40CQ96S21 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40CQ96S21 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40CQ96S21 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40CQ96S21 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40CQ96S21 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40CQ96S21 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB40CQ96S21 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40CQ96S21 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAB40CQ96S21 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB40CQ96S21 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40CQ96S21 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40CQ96S21 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40CQ96S21 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40CQ96S21 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40CQ96S21 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40CQ96S21 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RAB40CQ96S21 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40CQ96S21 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB40CQ96S21 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.39■□□□□ 0.05
RAB40CQ96S21 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40CQ96S21 AC022517.1-201ENST00000592429 346 ntBASIC15.39■□□□□ 0.05
RAB40CQ96S21 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40CQ96S21 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB40CQ96S21 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB40CQ96S21 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAB40CQ96S21 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms