Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 RPL8-210ENST00000531767 570 ntTSL 514.26□□□□□ -0.131e-17■■□□□ 13.2
LARP4Q71RC2 MSH6-207ENST00000456246 846 ntTSL 316.3■□□□□ 0.22e-6■■□□□ 13.2
LARP4Q71RC2 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.1□□□□□ -0.312e-6■■□□□ 13.2
LARP4Q71RC2 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.83□□□□□ -0.362e-6■■□□□ 13.2
LARP4Q71RC2 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC12.57□□□□□ -0.42e-6■■□□□ 13.2
LARP4Q71RC2 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC12.41□□□□□ -0.422e-6■■□□□ 13.2
LARP4Q71RC2 MSH6-204ENST00000445503 4158 ntTSL 1 (best)11.78□□□□□ -0.522e-6■■□□□ 13.2
LARP4Q71RC2 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.752e-6■■□□□ 13.2
LARP4Q71RC2 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.81□□□□□ -1.322e-6■■□□□ 13.2
LARP4Q71RC2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.91■□□□□ 0.147e-16■■□□□ 13.2
LARP4Q71RC2 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.48■■□□□ 1.836e-9■■□□□ 13.2
LARP4Q71RC2 MVK-203ENST00000447878 1644 ntTSL 225.09■■□□□ 1.616e-9■■□□□ 13.2
LARP4Q71RC2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.19■■□□□ 1.146e-9■■□□□ 13.2
LARP4Q71RC2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.376e-9■■□□□ 13.2
LARP4Q71RC2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.97■□□□□ 0.316e-9■■□□□ 13.2
LARP4Q71RC2 MVK-216ENST00000636996 1725 ntTSL 516.87■□□□□ 0.296e-9■■□□□ 13.2
LARP4Q71RC2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.066e-9■■□□□ 13.2
LARP4Q71RC2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.026e-9■■□□□ 13.2
LARP4Q71RC2 SPAG7-208ENST00000575784 694 ntTSL 314.95□□□□□ -0.026e-9■■□□□ 13.2
LARP4Q71RC2 MVK-215ENST00000636529 1509 ntTSL 514.71□□□□□ -0.056e-9■■□□□ 13.2
LARP4Q71RC2 HDDC2-201ENST00000318787 1350 ntTSL 1 (best)14.71□□□□□ -0.066e-9■■□□□ 13.2
LARP4Q71RC2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.63□□□□□ -0.076e-9■■□□□ 13.2
LARP4Q71RC2 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.26□□□□□ -0.296e-9■■□□□ 13.2
LARP4Q71RC2 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.36e-9■■□□□ 13.2
LARP4Q71RC2 HDDC2-209ENST00000609477 564 ntTSL 413.15□□□□□ -0.36e-9■■□□□ 13.2
LARP4Q71RC2 MVK-202ENST00000392727 1770 ntTSL 2 BASIC12.46□□□□□ -0.426e-9■■□□□ 13.2
LARP4Q71RC2 MVK-213ENST00000625889 2591 ntTSL 1 (best) BASIC12.41□□□□□ -0.426e-9■■□□□ 13.2
LARP4Q71RC2 MVK-209ENST00000540353 4109 ntTSL 29.91□□□□□ -0.826e-9■■□□□ 13.2
LARP4Q71RC2 HDDC2-205ENST00000608456 624 ntTSL 36.45□□□□□ -1.386e-9■■□□□ 13.2
LARP4Q71RC2 HDDC2-208ENST00000609021 3529 nt4.35□□□□□ -1.716e-9■■□□□ 13.2
LARP4Q71RC2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.54■□□□□ 0.083e-9■■□□□ 13.2
LARP4Q71RC2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.023e-9■■□□□ 13.2
LARP4Q71RC2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.183e-9■■□□□ 13.2
LARP4Q71RC2 RPL6-205ENST00000549562 583 ntTSL 25□□□□□ -1.612e-7■■□□□ 13.2
LARP4Q71RC2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.29■□□□□ 0.681e-8■■□□□ 13.2
LARP4Q71RC2 COX4I1-211ENST00000566405 490 ntTSL 511.4□□□□□ -0.581e-8■■□□□ 13.2
LARP4Q71RC2 PPP4C-204ENST00000562664 941 ntTSL 321.44■■□□□ 1.028e-7■■□□□ 13.2
LARP4Q71RC2 CALM3-206ENST00000594523 540 ntTSL 4 BASIC11.17□□□□□ -0.629e-7■■□□□ 13.2
LARP4Q71RC2 CKAP5-212ENST00000533413 3084 ntTSL 1 (best)5.22□□□□□ -1.571e-6■■□□□ 13.2
LARP4Q71RC2 SRSF9-204ENST00000548792 1446 ntTSL 28.31□□□□□ -1.081e-7■■□□□ 13.2
LARP4Q71RC2 PRKACA-204ENST00000587372 824 ntTSL 312.7□□□□□ -0.381e-10■■□□□ 13.2
LARP4Q71RC2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.14■□□□□ 0.493e-10■■□□□ 13.2
LARP4Q71RC2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.6■□□□□ 0.413e-10■■□□□ 13.2
LARP4Q71RC2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.36□□□□□ -0.113e-10■■□□□ 13.2
LARP4Q71RC2 CHMP4A-207ENST00000533523 1266 ntTSL 1 (best)14.29□□□□□ -0.123e-10■■□□□ 13.2
LARP4Q71RC2 CHMP4A-209ENST00000542700 847 ntTSL 36.79□□□□□ -1.323e-10■■□□□ 13.2
LARP4Q71RC2 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC12.14□□□□□ -0.473e-30■■□□□ 13.2
LARP4Q71RC2 RPLP1-203ENST00000487304 1962 ntTSL 512.02□□□□□ -0.493e-30■■□□□ 13.2
LARP4Q71RC2 RPLP1-201ENST00000260379 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.863e-30■■□□□ 13.2
LARP4Q71RC2 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC7.4□□□□□ -1.223e-30■■□□□ 13.2
LARP4Q71RC2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.092e-7■■□□□ 13.1
LARP4Q71RC2 EIF4G1-221ENST00000441154 4311 ntTSL 5 BASIC10.34□□□□□ -0.753e-9■■□□□ 13.1
LARP4Q71RC2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.85■□□□□ 0.617e-7■■□□□ 13.1
LARP4Q71RC2 DOLPP1-201ENST00000327812 1932 ntTSL 1 (best)17.81■□□□□ 0.447e-7■■□□□ 13.1
LARP4Q71RC2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.277e-7■■□□□ 13.1
LARP4Q71RC2 PSMA4-218ENST00000560099 2596 ntTSL 220.63■□□□□ 0.892e-7■■□□□ 13.1
LARP4Q71RC2 PSMA4-219ENST00000560217 944 ntTSL 5 BASIC10.7□□□□□ -0.72e-7■■□□□ 13.1
LARP4Q71RC2 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.252e-7■■□□□ 13.1
LARP4Q71RC2 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC6.98□□□□□ -1.292e-7■■□□□ 13.1
LARP4Q71RC2 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.22□□□□□ -1.412e-7■■□□□ 13.1
LARP4Q71RC2 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.94□□□□□ -1.622e-7■■□□□ 13.1
LARP4Q71RC2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.672e-7■■□□□ 13.1
LARP4Q71RC2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.11□□□□□ -1.752e-7■■□□□ 13.1
LARP4Q71RC2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.041e-16■■□□□ 13.1
LARP4Q71RC2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.514e-8■■□□□ 13.1
LARP4Q71RC2 PLK1-202ENST00000562272 4135 ntTSL 211.6□□□□□ -0.554e-8■■□□□ 13.1
LARP4Q71RC2 RPS3-204ENST00000525690 421 ntTSL 39.7□□□□□ -0.868e-16■■□□□ 13.1
LARP4Q71RC2 RPS3-205ENST00000525933 1307 ntTSL 59.16□□□□□ -0.948e-16■■□□□ 13.1
LARP4Q71RC2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.621e-7■■□□□ 13.1
LARP4Q71RC2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.21e-7■■□□□ 13.1
LARP4Q71RC2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.061e-7■■□□□ 13.1
LARP4Q71RC2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.061e-7■■□□□ 13.1
LARP4Q71RC2 EIF3L-208ENST00000451427 583 ntTSL 45.22□□□□□ -1.571e-14■■□□□ 13.1
LARP4Q71RC2 SARNP-201ENST00000336133 926 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.72e-12■■□□□ 13.1
LARP4Q71RC2 SARNP-202ENST00000546604 1163 ntTSL 210.02□□□□□ -0.812e-12■■□□□ 13.1
LARP4Q71RC2 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.12e-12■■□□□ 13.1
LARP4Q71RC2 SARNP-205ENST00000552884 997 ntTSL 1 (best)6.41□□□□□ -1.382e-12■■□□□ 13.1
LARP4Q71RC2 SARNP-206ENST00000552946 518 ntTSL 25.49□□□□□ -1.532e-12■■□□□ 13.1
LARP4Q71RC2 BAX-210ENST00000513217 869 ntTSL 212.67□□□□□ -0.381e-7■■□□□ 13.1
LARP4Q71RC2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.74■□□□□ 0.592e-7■■□□□ 13.1
LARP4Q71RC2 LUC7L2-204ENST00000456182 2411 ntTSL 1 (best)18■□□□□ 0.472e-7■■□□□ 13.1
LARP4Q71RC2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.312e-7■■□□□ 13.1
LARP4Q71RC2 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.61□□□□□ -1.352e-7■■□□□ 13.1
LARP4Q71RC2 LUC7L2-206ENST00000482860 2599 ntTSL 25.03□□□□□ -1.63e-6■■□□□ 13.1
LARP4Q71RC2 LUC7L2-207ENST00000498518 2837 ntTSL 23.81□□□□□ -1.82e-7■■□□□ 13.1
LARP4Q71RC2 TRAPPC3-206ENST00000469757 221 ntTSL 27.67□□□□□ -1.185e-6■■□□□ 13.1
LARP4Q71RC2 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.321e-6■■□□□ 13.1
LARP4Q71RC2 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.89□□□□□ -0.351e-6■■□□□ 13.1
LARP4Q71RC2 RERE-203ENST00000400907 2973 ntTSL 5 BASIC7.83□□□□□ -1.161e-6■■□□□ 13.1
LARP4Q71RC2 RERE-216ENST00000505225 533 ntTSL 26.17□□□□□ -1.421e-6■■□□□ 13.1
LARP4Q71RC2 RPS3-220ENST00000534555 387 ntTSL 314.25□□□□□ -0.133e-17■■□□□ 13.1
LARP4Q71RC2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.93■□□□□ 0.146e-15■■□□□ 13.1
LARP4Q71RC2 KRT19-202ENST00000455635 641 ntTSL 317.37■□□□□ 0.372e-7■■□□□ 13.1
LARP4Q71RC2 KRT19-205ENST00000471565 654 ntTSL 215.66■□□□□ 0.12e-7■■□□□ 13.1
LARP4Q71RC2 KRT19-207ENST00000593096 728 ntTSL 314.33□□□□□ -0.122e-7■■□□□ 13.1
LARP4Q71RC2 KRT19-206ENST00000479031 427 ntTSL 213.26□□□□□ -0.292e-7■■□□□ 13.1
LARP4Q71RC2 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.65□□□□□ -0.225e-9■■□□□ 13.1
LARP4Q71RC2 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.65□□□□□ -0.225e-9■■□□□ 13.1
LARP4Q71RC2 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.35e-9■■□□□ 13.1
LARP4Q71RC2 OS9-202ENST00000315970 2691 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.535e-9■■□□□ 13.1
Retrieved 100 of 15,922 protein–RNA pairs in 198.8 ms