RNA–Protein interactions for RNA: ENST00000546604.5

SARNP-202, Transcript of SAP domain containing ribonucleoprotein, humanhuman

TSL 2

Gene SARNP, Length 1,163 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARNP-202ENST00000546604 AEBP2Q6ZN18 517 aaPredicted RBP32.83■■■□□ 2.85
SARNP-202ENST00000546604 CHIC1Q5VXU3 224 aa31.76■■■□□ 2.67
SARNP-202ENST00000546604 PHF23Q9BUL5 403 aaPredicted RBP27.96■■■□□ 2.07
SARNP-202ENST00000546604 SENP3Q9H4L4 574 aaPredicted RBP27.8■■■□□ 2.04
SARNP-202ENST00000546604 NISCHQ9Y2I1 1504 aa27.25■■□□□ 1.95
SARNP-202ENST00000546604 FOXD1Q16676 465 aa25.9■■□□□ 1.74
SARNP-202ENST00000546604 PLPPR3Q6T4P5 718 aa25.65■■□□□ 1.7
SARNP-202ENST00000546604 PPP6R1Q9UPN7 881 aa24.77■■□□□ 1.56
SARNP-202ENST00000546604 ADRA2BP18089 450 aa24.73■■□□□ 1.55
SARNP-202ENST00000546604 CCDC180Q9P1Z9 1646 aa24.6■■□□□ 1.53
SARNP-202ENST00000546604 ABCC9O60706 1549 aa24.56■■□□□ 1.52
SARNP-202ENST00000546604 PIAS4Q8N2W9 510 aaPredicted RBP24.35■■□□□ 1.49
SARNP-202ENST00000546604 MSH5O43196 834 aa23.9■■□□□ 1.42
SARNP-202ENST00000546604 RB1CC1Q8TDY2 1594 aa23.38■■□□□ 1.33
SARNP-202ENST00000546604 NACADO15069 1562 aa23.15■■□□□ 1.3
SARNP-202ENST00000546604 DCAF8L2P0C7V8 631 aa23.06■■□□□ 1.28
SARNP-202ENST00000546604 UNC13AQ9UPW8 1703 aa23.02■■□□□ 1.28
SARNP-202ENST00000546604 DNAJC5BQ9UF47 199 aa22.87■■□□□ 1.25
SARNP-202ENST00000546604 PABPN1Q86U42 306 aaKnown RBP eCLIP22.79■■□□□ 1.24
SARNP-202ENST00000546604 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
SARNP-202ENST00000546604 BICRAQ9NZM4 1560 aa22.65■■□□□ 1.22
SARNP-202ENST00000546604 PPP4R3CPQ6ZMV5 832 aa22.61■■□□□ 1.21
SARNP-202ENST00000546604 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
SARNP-202ENST00000546604 MAPK8IP2Q13387 824 aaPredicted RBP22.53■■□□□ 1.2
SARNP-202ENST00000546604 SCAF1Q9H7N4 1312 aaKnown RBP22.5■■□□□ 1.19
SARNP-202ENST00000546604 DCAF1Q9Y4B6 1507 aa22.46■■□□□ 1.19
SARNP-202ENST00000546604 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
SARNP-202ENST00000546604 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
SARNP-202ENST00000546604 POTEDQ86YR6 584 aa22.27■■□□□ 1.16
SARNP-202ENST00000546604 CC2D2AQ9P2K1 1620 aa22.21■■□□□ 1.15
SARNP-202ENST00000546604 DMRT2Q9Y5R5 561 aa22.17■■□□□ 1.14
SARNP-202ENST00000546604 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
SARNP-202ENST00000546604 CECR2Q9BXF3 1484 aa22.08■■□□□ 1.12
SARNP-202ENST00000546604 CNKSR2Q8WXI2 1034 aa21.99■■□□□ 1.11
SARNP-202ENST00000546604 NCBP3Q53F19 620 aaKnown RBP21.88■■□□□ 1.09
SARNP-202ENST00000546604 KCNA4P22459 653 aa21.85■■□□□ 1.09
SARNP-202ENST00000546604 NPM3O75607 178 aaKnown RBP21.64■■□□□ 1.05
SARNP-202ENST00000546604 RNF216Q9NWF9 866 aaPredicted RBP21.62■■□□□ 1.05
SARNP-202ENST00000546604 HOXD11P31277 338 aaPredicted RBP21.61■■□□□ 1.05
SARNP-202ENST00000546604 SMARCA4P51532 1647 aa21.36■■□□□ 1.01
SARNP-202ENST00000546604 SMARCA2P51531 1590 aa21.27■■□□□ 1
SARNP-202ENST00000546604 NCAPD3P42695 1498 aa21.27■■□□□ 1
SARNP-202ENST00000546604 DCAF8L1A6NGE4 600 aa21.27■■□□□ 1
SARNP-202ENST00000546604 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
SARNP-202ENST00000546604 ERCC6Q03468 1493 aa21.24■□□□□ 0.99
SARNP-202ENST00000546604 HMGXB3Q12766 1538 aa21.23■□□□□ 0.99
SARNP-202ENST00000546604 BAZ1AQ9NRL2 1556 aaPredicted RBP21.2■□□□□ 0.98
SARNP-202ENST00000546604 BAZ1BQ9UIG0 1483 aaKnown RBP21.14■□□□□ 0.98
SARNP-202ENST00000546604 CUX2O14529 1486 aa21.1■□□□□ 0.97
SARNP-202ENST00000546604 NESP48681 1621 aa21.08■□□□□ 0.97
SARNP-202ENST00000546604 PEG3Q9GZU2 1588 aa21.05■□□□□ 0.96
SARNP-202ENST00000546604 MROH2BQ7Z745 1585 aa21.03■□□□□ 0.96
SARNP-202ENST00000546604 DNAJC5Q9H3Z4 198 aa21■□□□□ 0.95
SARNP-202ENST00000546604 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
SARNP-202ENST00000546604 LAMC3Q9Y6N6 1575 aa20.93■□□□□ 0.94
SARNP-202ENST00000546604 THOC2Q8NI27 1593 aaKnown RBP20.93■□□□□ 0.94
SARNP-202ENST00000546604 WIZO95785 1651 aa20.88■□□□□ 0.93
SARNP-202ENST00000546604 PDS5BQ9NTI5 1447 aa20.74■□□□□ 0.91
SARNP-202ENST00000546604 SLC4A1APQ9BWU0 796 aaKnown RBP20.73■□□□□ 0.91
SARNP-202ENST00000546604 CADPSQ9ULU8 1353 aa20.64■□□□□ 0.89
SARNP-202ENST00000546604 MRC2Q9UBG0 1479 aa20.62■□□□□ 0.89
SARNP-202ENST00000546604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.61■□□□□ 0.891e-6■■■□□ 16.1
SARNP-202ENST00000546604 WDR62O43379 1518 aa20.57■□□□□ 0.88
SARNP-202ENST00000546604 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
SARNP-202ENST00000546604 TOP2AP11388 1531 aaKnown RBP20.54■□□□□ 0.88
SARNP-202ENST00000546604 PRDM2Q13029 1718 aa20.53■□□□□ 0.88
SARNP-202ENST00000546604 SLC4A2P04920 1241 aa20.52■□□□□ 0.88
SARNP-202ENST00000546604 RSF1Q96T23 1441 aaPredicted RBP20.52■□□□□ 0.87
SARNP-202ENST00000546604 FANCD2Q9BXW9 1451 aa20.5■□□□□ 0.87
SARNP-202ENST00000546604 RNF39Q9H2S5 420 aa20.5■□□□□ 0.87
SARNP-202ENST00000546604 CFTRP13569 1480 aa20.42■□□□□ 0.86
SARNP-202ENST00000546604 URB2Q14146 1524 aaKnown RBP20.33■□□□□ 0.85
SARNP-202ENST00000546604 U3KPZ7 1027 aaPredicted RBP20.28■□□□□ 0.84
SARNP-202ENST00000546604 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
SARNP-202ENST00000546604 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
SARNP-202ENST00000546604 C1QBPQ07021 282 aaKnown RBP20.2■□□□□ 0.82
SARNP-202ENST00000546604 CACNB1Q02641 598 aaPredicted RBP20.15■□□□□ 0.82
SARNP-202ENST00000546604 ZBTB22O15209 634 aa20.13■□□□□ 0.81
SARNP-202ENST00000546604 FOXD4L1Q9NU39 408 aa20.12■□□□□ 0.81
SARNP-202ENST00000546604 TOPBP1Q92547 1522 aa20.12■□□□□ 0.81
SARNP-202ENST00000546604 IFT140Q96RY7 1462 aa20.09■□□□□ 0.81
SARNP-202ENST00000546604 EIF4G3O43432 1585 aaKnown RBP20.08■□□□□ 0.81
SARNP-202ENST00000546604 DNMBPQ6XZF7 1577 aa20.08■□□□□ 0.81
SARNP-202ENST00000546604 ZNF608Q9ULD9 1512 aaPredicted RBP20.08■□□□□ 0.81
SARNP-202ENST00000546604 OSCARQ8IYS5 282 aa20.07■□□□□ 0.8
SARNP-202ENST00000546604 CHD1O14646 1710 aa20.02■□□□□ 0.8
SARNP-202ENST00000546604 ABCC8Q09428 1581 aa20.02■□□□□ 0.8
SARNP-202ENST00000546604 RIMBP3CA6NJZ7 1639 aa20■□□□□ 0.79
SARNP-202ENST00000546604 RIMBP3BA6NNM3 1639 aa20■□□□□ 0.79
SARNP-202ENST00000546604 RIMBP3Q9UFD9 1639 aa20■□□□□ 0.79
SARNP-202ENST00000546604 TARBP1Q13395 1621 aaKnown RBP19.97■□□□□ 0.79
SARNP-202ENST00000546604 MYCNP04198 464 aaPredicted RBP19.95■□□□□ 0.78
SARNP-202ENST00000546604 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
SARNP-202ENST00000546604 POLA1P09884 1462 aaPredicted RBP19.9■□□□□ 0.78
SARNP-202ENST00000546604 AQRO60306 1485 aaKnown RBP eCLIP19.87■□□□□ 0.776e-7■■■□□ 17.6
SARNP-202ENST00000546604 ARHGEF11O15085 1522 aa19.86■□□□□ 0.77
SARNP-202ENST00000546604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.83■□□□□ 0.77
SARNP-202ENST00000546604 HNRNPUL2Q1KMD3 747 aaKnown RBP19.83■□□□□ 0.77
SARNP-202ENST00000546604 RAD54L2Q9Y4B4 1467 aa19.83■□□□□ 0.76
SARNP-202ENST00000546604 SPINK5Q9NQ38 1064 aaPredicted RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms