RNA–Protein interactions for RNA: ENST00000558341.5

PSMA4-206, Transcript of proteasome subunit alpha 4, humanhuman

TSL 5 BASIC

Gene PSMA4, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-206ENST00000558341 AEBP2Q6ZN18 517 aaPredicted RBP24.36■■□□□ 1.49
PSMA4-206ENST00000558341 CHIC1Q5VXU3 224 aa23.78■■□□□ 1.4
PSMA4-206ENST00000558341 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
PSMA4-206ENST00000558341 SENP3Q9H4L4 574 aaPredicted RBP20.61■□□□□ 0.89
PSMA4-206ENST00000558341 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
PSMA4-206ENST00000558341 FOXD1Q16676 465 aa19.17■□□□□ 0.66
PSMA4-206ENST00000558341 PPP6R1Q9UPN7 881 aa18.49■□□□□ 0.55
PSMA4-206ENST00000558341 ADRA2BP18089 450 aa18.46■□□□□ 0.55
PSMA4-206ENST00000558341 PIAS4Q8N2W9 510 aaPredicted RBP18.06■□□□□ 0.48
PSMA4-206ENST00000558341 MSH5O43196 834 aa17.62■□□□□ 0.41
PSMA4-206ENST00000558341 PPP4R3CPQ6ZMV5 832 aa17.03■□□□□ 0.32
PSMA4-206ENST00000558341 SCAF1Q9H7N4 1312 aaKnown RBP16.83■□□□□ 0.28
PSMA4-206ENST00000558341 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
PSMA4-206ENST00000558341 KCNA4P22459 653 aa16.68■□□□□ 0.26
PSMA4-206ENST00000558341 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
PSMA4-206ENST00000558341 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
PSMA4-206ENST00000558341 DMRT2Q9Y5R5 561 aa16.48■□□□□ 0.23
PSMA4-206ENST00000558341 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
PSMA4-206ENST00000558341 RNF216Q9NWF9 866 aaPredicted RBP16.21■□□□□ 0.19
PSMA4-206ENST00000558341 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
PSMA4-206ENST00000558341 POTEDQ86YR6 584 aa16.04■□□□□ 0.16
PSMA4-206ENST00000558341 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
PSMA4-206ENST00000558341 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
PSMA4-206ENST00000558341 DCAF8L1A6NGE4 600 aa15.75■□□□□ 0.11
PSMA4-206ENST00000558341 SLC4A2P04920 1241 aa15.45■□□□□ 0.06
PSMA4-206ENST00000558341 EHMT2Q96KQ7 1210 aa15.45■□□□□ 0.06
PSMA4-206ENST00000558341 ZBTB22O15209 634 aa15.37■□□□□ 0.05
PSMA4-206ENST00000558341 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.37■□□□□ 0.052e-9■■■■■ 28.3
PSMA4-206ENST00000558341 FOXD4L1Q9NU39 408 aa15.31■□□□□ 0.04
PSMA4-206ENST00000558341 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
PSMA4-206ENST00000558341 U3KPZ7 1027 aaPredicted RBP15.15■□□□□ 0.02
PSMA4-206ENST00000558341 RNF39Q9H2S5 420 aa15.13■□□□□ 0.01
PSMA4-206ENST00000558341 MYCNP04198 464 aaPredicted RBP15.08■□□□□ 0
PSMA4-206ENST00000558341 C1QBPQ07021 282 aaKnown RBP14.93□□□□□ -0.02
PSMA4-206ENST00000558341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
PSMA4-206ENST00000558341 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
PSMA4-206ENST00000558341 SAMD1Q6SPF0 538 aaPredicted RBP14.87□□□□□ -0.03
PSMA4-206ENST00000558341 ATXN8OSP0DMR3 200 aa14.77□□□□□ -0.05
PSMA4-206ENST00000558341 ATF5Q9Y2D1 282 aaPredicted RBP14.74□□□□□ -0.05
PSMA4-206ENST00000558341 APLP2Q06481 763 aa14.73□□□□□ -0.05
PSMA4-206ENST00000558341 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
PSMA4-206ENST00000558341 CACNB1Q02641 598 aaPredicted RBP14.7□□□□□ -0.06
PSMA4-206ENST00000558341 CAPN15O75808 1086 aa14.64□□□□□ -0.07
PSMA4-206ENST00000558341 TRHP20396 242 aaPredicted RBP14.58□□□□□ -0.08
PSMA4-206ENST00000558341 ZNF219Q9P2Y4 722 aaPredicted RBP14.56□□□□□ -0.08
PSMA4-206ENST00000558341 DSG3P32926 999 aa14.41□□□□□ -0.1
PSMA4-206ENST00000558341 ABCB7O75027 752 aa14.38□□□□□ -0.11
PSMA4-206ENST00000558341 POLA2Q14181 598 aa14.37□□□□□ -0.11
PSMA4-206ENST00000558341 MKRN4PQ13434 485 aaPredicted RBP14.09□□□□□ -0.15
PSMA4-206ENST00000558341 ZBTB12Q9Y330 459 aaPredicted RBP14.08□□□□□ -0.16
PSMA4-206ENST00000558341 FBLN2P98095 1184 aa14.04□□□□□ -0.16
PSMA4-206ENST00000558341 OSCARQ8IYS5 282 aa13.87□□□□□ -0.19
PSMA4-206ENST00000558341 FKBP8Q14318 412 aa13.79□□□□□ -0.2
PSMA4-206ENST00000558341 SPDYE4A6NLX3 237 aa13.75□□□□□ -0.21
PSMA4-206ENST00000558341 SPDYE2BA6NHP3 402 aa13.72□□□□□ -0.21
PSMA4-206ENST00000558341 SPDYE6P0CI01 402 aa13.72□□□□□ -0.21
PSMA4-206ENST00000558341 SPDYE2Q495Y8 402 aa13.72□□□□□ -0.21
PSMA4-206ENST00000558341 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
PSMA4-206ENST00000558341 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
PSMA4-206ENST00000558341 SSUH2Q9Y2M2 353 aa13.64□□□□□ -0.23
PSMA4-206ENST00000558341 PROM2Q8N271 834 aa13.55□□□□□ -0.24
PSMA4-206ENST00000558341 AKT1S1Q96B36 256 aa13.54□□□□□ -0.24
PSMA4-206ENST00000558341 PABPN1Q86U42 306 aaKnown RBP eCLIP13.51□□□□□ -0.25
PSMA4-206ENST00000558341 REM2Q8IYK8 340 aaPredicted RBP13.43□□□□□ -0.26
PSMA4-206ENST00000558341 SPDYE1Q8NFV5 336 aaPredicted RBP13.3□□□□□ -0.28
PSMA4-206ENST00000558341 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
PSMA4-206ENST00000558341 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
PSMA4-206ENST00000558341 FBXO3Q9UK99 471 aa13.26□□□□□ -0.29
PSMA4-206ENST00000558341 CLEC11AQ9Y240 323 aa13.26□□□□□ -0.29
PSMA4-206ENST00000558341 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
PSMA4-206ENST00000558341 CHRDL2Q6WN34 429 aa13.14□□□□□ -0.31
PSMA4-206ENST00000558341 VASPP50552 380 aaPredicted RBP13.11□□□□□ -0.31
PSMA4-206ENST00000558341 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.324e-7■□□□□ 8.7
PSMA4-206ENST00000558341 MIER1Q8N108 512 aa13.03□□□□□ -0.32
PSMA4-206ENST00000558341 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
PSMA4-206ENST00000558341 PLCD3Q8N3E9 789 aa13□□□□□ -0.33
PSMA4-206ENST00000558341 PIP4P2Q8N4L2 257 aa12.99□□□□□ -0.33
PSMA4-206ENST00000558341 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
PSMA4-206ENST00000558341 IFNLR1Q8IU57 520 aaPredicted RBP12.96□□□□□ -0.33
PSMA4-206ENST00000558341 PRKAR2AP13861 404 aaKnown RBP12.94□□□□□ -0.34
PSMA4-206ENST00000558341 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
PSMA4-206ENST00000558341 MNX1P50219 401 aaPredicted RBP12.89□□□□□ -0.35
PSMA4-206ENST00000558341 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
PSMA4-206ENST00000558341 ZBTB47Q9UFB7 747 aaPredicted RBP12.83□□□□□ -0.36
PSMA4-206ENST00000558341 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.36
PSMA4-206ENST00000558341 SPOCK2Q92563 424 aa12.76□□□□□ -0.37
PSMA4-206ENST00000558341 NPM1P06748 294 aaKnown RBP eCLIP12.75□□□□□ -0.37
PSMA4-206ENST00000558341 NUBP1P53384 320 aa12.72□□□□□ -0.37
PSMA4-206ENST00000558341 POTEHQ6S545 545 aa12.7□□□□□ -0.38
PSMA4-206ENST00000558341 RASEFQ8IZ41 740 aa12.66□□□□□ -0.38
PSMA4-206ENST00000558341 C19orf67A6NJJ6 358 aa12.58□□□□□ -0.4
PSMA4-206ENST00000558341 AMER1Q5JTC6 1135 aaPredicted RBP12.58□□□□□ -0.4
PSMA4-206ENST00000558341 FAM212AQ96EL1 285 aa12.58□□□□□ -0.4
PSMA4-206ENST00000558341 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.4
PSMA4-206ENST00000558341 CD44P16070 742 aaKnown RBP12.57□□□□□ -0.4
PSMA4-206ENST00000558341 DCAF8Q5TAQ9 597 aa12.57□□□□□ -0.4
PSMA4-206ENST00000558341 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
PSMA4-206ENST00000558341 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
PSMA4-206ENST00000558341 HAX1O00165 279 aa12.55□□□□□ -0.4
PSMA4-206ENST00000558341 GSE1Q14687 1217 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms