RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 AEBP2Q6ZN18 517 aaPredicted RBP9.65□□□□□ -0.86
HDDC2-208ENST00000609021 CHIC1Q5VXU3 224 aa9.05□□□□□ -0.96
HDDC2-208ENST00000609021 NISCHQ9Y2I1 1504 aa8.75□□□□□ -1.01
HDDC2-208ENST00000609021 MYT1Q01538 1121 aa8.71□□□□□ -1.02
HDDC2-208ENST00000609021 PELP1Q8IZL8 1130 aaKnown RBP8.7□□□□□ -1.02
HDDC2-208ENST00000609021 TTBK1Q5TCY1 1321 aaPredicted RBP8.36□□□□□ -1.07
HDDC2-208ENST00000609021 SLC24A1O60721 1099 aa8.29□□□□□ -1.08
HDDC2-208ENST00000609021 ERICH6Q7L0X2 663 aa8.16□□□□□ -1.1
HDDC2-208ENST00000609021 POTEDQ86YR6 584 aa8.16□□□□□ -1.1
HDDC2-208ENST00000609021 PHF23Q9BUL5 403 aaPredicted RBP8.09□□□□□ -1.11
HDDC2-208ENST00000609021 SENP3Q9H4L4 574 aaPredicted RBP8.05□□□□□ -1.12
HDDC2-208ENST00000609021 PRKCSHP14314 528 aaPredicted RBP8.04□□□□□ -1.12
HDDC2-208ENST00000609021 APLP2Q06481 763 aa7.85□□□□□ -1.15
HDDC2-208ENST00000609021 CCDC180Q9P1Z9 1646 aa7.84□□□□□ -1.15
HDDC2-208ENST00000609021 DAXXQ9UER7 740 aaPredicted RBP7.8□□□□□ -1.16
HDDC2-208ENST00000609021 BCL11AQ9H165 835 aa7.75□□□□□ -1.17
HDDC2-208ENST00000609021 EIF5BO60841 1220 aaKnown RBP7.65□□□□□ -1.19
HDDC2-208ENST00000609021 FOXD1Q16676 465 aa7.64□□□□□ -1.19
HDDC2-208ENST00000609021 CENPBP07199 599 aaPredicted RBP7.57□□□□□ -1.2
HDDC2-208ENST00000609021 FAM9AQ8IZU1 332 aaPredicted RBP7.55□□□□□ -1.2
HDDC2-208ENST00000609021 HRCP23327 699 aa7.52□□□□□ -1.21
HDDC2-208ENST00000609021 SCAF1Q9H7N4 1312 aaKnown RBP7.47□□□□□ -1.21
HDDC2-208ENST00000609021 ZCCHC6Q5VYS8 1495 aaKnown RBP7.43□□□□□ -1.22
HDDC2-208ENST00000609021 RANGAP1P46060 587 aaPredicted RBP7.41□□□□□ -1.22
HDDC2-208ENST00000609021 DCAF1Q9Y4B6 1507 aa7.38□□□□□ -1.23
HDDC2-208ENST00000609021 PLEKHG5O94827 1062 aa7.32□□□□□ -1.24
HDDC2-208ENST00000609021 PODXL2Q9NZ53 605 aa7.31□□□□□ -1.24
HDDC2-208ENST00000609021 UNC13AQ9UPW8 1703 aa7.31□□□□□ -1.24
HDDC2-208ENST00000609021 MYO15BQ96JP2 1530 aa7.3□□□□□ -1.24
HDDC2-208ENST00000609021 ADRA2BP18089 450 aa7.29□□□□□ -1.24
HDDC2-208ENST00000609021 PPP6R1Q9UPN7 881 aa7.29□□□□□ -1.24
HDDC2-208ENST00000609021 NCBP3Q53F19 620 aaKnown RBP7.27□□□□□ -1.25
HDDC2-208ENST00000609021 PPARGC1BQ86YN6 1023 aaKnown RBP7.26□□□□□ -1.25
HDDC2-208ENST00000609021 ANP32EQ9BTT0 268 aa7.26□□□□□ -1.25
HDDC2-208ENST00000609021 EHMT2Q96KQ7 1210 aa7.25□□□□□ -1.25
HDDC2-208ENST00000609021 PLPPR3Q6T4P5 718 aa7.24□□□□□ -1.25
HDDC2-208ENST00000609021 UBE2Q2Q8WVN8 375 aa7.21□□□□□ -1.26
HDDC2-208ENST00000609021 PIAS4Q8N2W9 510 aaPredicted RBP7.2□□□□□ -1.26
HDDC2-208ENST00000609021 GTF3C3Q9Y5Q9 886 aa7.2□□□□□ -1.26
HDDC2-208ENST00000609021 ACIN1Q9UKV3 1341 aaKnown RBP7.18□□□□□ -1.26
HDDC2-208ENST00000609021 PKNOX2Q96KN3 472 aa7.16□□□□□ -1.26
HDDC2-208ENST00000609021 ARXQ96QS3 562 aa7.16□□□□□ -1.26
HDDC2-208ENST00000609021 ANO8Q9HCE9 1232 aaPredicted RBP7.15□□□□□ -1.26
HDDC2-208ENST00000609021 RTN4Q9NQC3 1192 aaKnown RBP7.14□□□□□ -1.27
HDDC2-208ENST00000609021 NEFLP07196 543 aa7.14□□□□□ -1.27
HDDC2-208ENST00000609021 CSRNP3Q8WYN3 585 aa7.13□□□□□ -1.27
HDDC2-208ENST00000609021 KLHL34Q8N239 644 aa7.11□□□□□ -1.27
HDDC2-208ENST00000609021 NACADO15069 1562 aa7.1□□□□□ -1.27
HDDC2-208ENST00000609021 PCGF6Q9BYE7 350 aa7.09□□□□□ -1.27
HDDC2-208ENST00000609021 ZEB1P37275 1124 aaPredicted RBP7.06□□□□□ -1.28
HDDC2-208ENST00000609021 BICRAQ9NZM4 1560 aa7.06□□□□□ -1.28
HDDC2-208ENST00000609021 NEUROD1Q13562 356 aa7.05□□□□□ -1.28
HDDC2-208ENST00000609021 TIMELESSQ9UNS1 1208 aa7.05□□□□□ -1.28
HDDC2-208ENST00000609021 PDIA4P13667 645 aaKnown RBP7.05□□□□□ -1.28
HDDC2-208ENST00000609021 PDE4CQ08493 712 aa7.05□□□□□ -1.28
HDDC2-208ENST00000609021 TULP1O00294 542 aaPredicted RBP7.01□□□□□ -1.29
HDDC2-208ENST00000609021 HOMEZQ8IX15 550 aa7□□□□□ -1.29
HDDC2-208ENST00000609021 ABCC9O60706 1549 aa7□□□□□ -1.29
HDDC2-208ENST00000609021 GLIPR1L2Q4G1C9 344 aa7□□□□□ -1.29
HDDC2-208ENST00000609021 CCDC136Q96JN2 1154 aa6.99□□□□□ -1.29
HDDC2-208ENST00000609021 RB1CC1Q8TDY2 1594 aa6.97□□□□□ -1.29
HDDC2-208ENST00000609021 MYT1LQ9UL68 1186 aa6.95□□□□□ -1.3
HDDC2-208ENST00000609021 SALL2Q9Y467 1007 aaPredicted RBP6.94□□□□□ -1.3
HDDC2-208ENST00000609021 SCRIBQ14160 1630 aa6.94□□□□□ -1.3
HDDC2-208ENST00000609021 ERICH6BQ5W0A0 696 aa6.94□□□□□ -1.3
HDDC2-208ENST00000609021 MSH5O43196 834 aa6.94□□□□□ -1.3
HDDC2-208ENST00000609021 CLSPNQ9HAW4 1339 aa6.92□□□□□ -1.3
HDDC2-208ENST00000609021 A0A0U1RQG5 324 aaPredicted RBP6.91□□□□□ -1.3
HDDC2-208ENST00000609021 EIF4G1Q04637 1599 aaKnown RBP6.89□□□□□ -1.31
HDDC2-208ENST00000609021 AMER1Q5JTC6 1135 aaPredicted RBP6.88□□□□□ -1.31
HDDC2-208ENST00000609021 TAF7LQ5H9L4 462 aa6.87□□□□□ -1.31
HDDC2-208ENST00000609021 NPM2Q86SE8 214 aaKnown RBP6.87□□□□□ -1.31
HDDC2-208ENST00000609021 C14orf37Q86TY3 774 aa6.87□□□□□ -1.31
HDDC2-208ENST00000609021 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.87□□□□□ -1.31
HDDC2-208ENST00000609021 PEG3Q9GZU2 1588 aa6.86□□□□□ -1.31
HDDC2-208ENST00000609021 BCL11BQ9C0K0 894 aaPredicted RBP6.86□□□□□ -1.31
HDDC2-208ENST00000609021 HAP1P54257 671 aaPredicted RBP6.84□□□□□ -1.32
HDDC2-208ENST00000609021 FGD1P98174 961 aa6.84□□□□□ -1.32
HDDC2-208ENST00000609021 DEKP35659 375 aaKnown RBP6.83□□□□□ -1.32
HDDC2-208ENST00000609021 SHROOM4Q9ULL8 1493 aa6.82□□□□□ -1.32
HDDC2-208ENST00000609021 SMARCA4P51532 1647 aa6.8□□□□□ -1.32
HDDC2-208ENST00000609021 ZNF326Q5BKZ1 582 aaKnown RBP6.79□□□□□ -1.32
HDDC2-208ENST00000609021 DCAF8L2P0C7V8 631 aa6.79□□□□□ -1.32
HDDC2-208ENST00000609021 DHX37Q8IY37 1157 aaKnown RBP6.78□□□□□ -1.32
HDDC2-208ENST00000609021 VSIG10Q8N0Z9 540 aa6.78□□□□□ -1.32
HDDC2-208ENST00000609021 WIZO95785 1651 aa6.78□□□□□ -1.32
HDDC2-208ENST00000609021 CCER1Q8TC90 406 aaPredicted RBP6.78□□□□□ -1.32
HDDC2-208ENST00000609021 MROH2BQ7Z745 1585 aa6.77□□□□□ -1.33
HDDC2-208ENST00000609021 BAZ1AQ9NRL2 1556 aaPredicted RBP6.77□□□□□ -1.33
HDDC2-208ENST00000609021 CHMP4AQ9BY43 222 aa6.77□□□□□ -1.33
HDDC2-208ENST00000609021 BRD2P25440 801 aaKnown RBP6.76□□□□□ -1.33
HDDC2-208ENST00000609021 CECR2Q9BXF3 1484 aa6.76□□□□□ -1.33
HDDC2-208ENST00000609021 ZMYND15Q9H091 742 aa6.76□□□□□ -1.33
HDDC2-208ENST00000609021 YTHDC1Q96MU7 727 aaKnown RBP6.75□□□□□ -1.33
HDDC2-208ENST00000609021 NAP1L5Q96NT1 182 aaPredicted RBP6.75□□□□□ -1.33
HDDC2-208ENST00000609021 TSHZ2Q9NRE2 1034 aa6.75□□□□□ -1.33
HDDC2-208ENST00000609021 TAOK2Q9UL54 1235 aa6.74□□□□□ -1.33
HDDC2-208ENST00000609021 RBM10P98175 930 aaKnown RBP6.73□□□□□ -1.33
HDDC2-208ENST00000609021 CDK11BP21127 795 aaKnown RBP6.73□□□□□ -1.33
HDDC2-208ENST00000609021 CDK11AQ9UQ88 783 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms