Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 BX119927.1-201ENST00000636596 1552 ntBASIC17.05■□□□□ 0.32
PFDN1O60925 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PFDN1O60925 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.05■□□□□ 0.32
PFDN1O60925 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.05■□□□□ 0.32
PFDN1O60925 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.04■□□□□ 0.32
PFDN1O60925 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PFDN1O60925 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
PFDN1O60925 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
PFDN1O60925 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PFDN1O60925 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PFDN1O60925 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.04■□□□□ 0.32
PFDN1O60925 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PFDN1O60925 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PFDN1O60925 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.04■□□□□ 0.32
PFDN1O60925 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PFDN1O60925 AL034346.1-201ENST00000568244 1277 ntBASIC17.04■□□□□ 0.32
PFDN1O60925 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.04■□□□□ 0.32
PFDN1O60925 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 AC022413.1-201ENST00000624602 984 ntBASIC17.04■□□□□ 0.32
PFDN1O60925 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.04■□□□□ 0.32
PFDN1O60925 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.04■□□□□ 0.32
PFDN1O60925 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PFDN1O60925 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
PFDN1O60925 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.04■□□□□ 0.32
PFDN1O60925 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.04■□□□□ 0.32
PFDN1O60925 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.04■□□□□ 0.32
PFDN1O60925 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PFDN1O60925 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.04■□□□□ 0.32
PFDN1O60925 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PFDN1O60925 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PFDN1O60925 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PFDN1O60925 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PFDN1O60925 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PFDN1O60925 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.03■□□□□ 0.32
PFDN1O60925 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PFDN1O60925 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.03■□□□□ 0.32
PFDN1O60925 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PFDN1O60925 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PFDN1O60925 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PFDN1O60925 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.03■□□□□ 0.32
PFDN1O60925 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.03■□□□□ 0.32
PFDN1O60925 AL592293.1-201ENST00000502889 1188 ntBASIC17.03■□□□□ 0.32
PFDN1O60925 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.03■□□□□ 0.32
PFDN1O60925 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.03■□□□□ 0.32
PFDN1O60925 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PFDN1O60925 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PFDN1O60925 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PFDN1O60925 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PFDN1O60925 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.03■□□□□ 0.32
PFDN1O60925 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.03■□□□□ 0.32
PFDN1O60925 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.03■□□□□ 0.32
PFDN1O60925 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PFDN1O60925 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PFDN1O60925 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PFDN1O60925 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PFDN1O60925 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN1O60925 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN1O60925 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PFDN1O60925 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN1O60925 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN1O60925 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.02■□□□□ 0.32
PFDN1O60925 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN1O60925 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN1O60925 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN1O60925 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN1O60925 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PFDN1O60925 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PFDN1O60925 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN1O60925 AC133552.2-201ENST00000619106 1032 ntBASIC17.02■□□□□ 0.32
PFDN1O60925 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN1O60925 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms