Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 AL390719.1-204ENST00000412397 1219 ntBASIC16.24■□□□□ 0.19
TMEM235A6NFC5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM235A6NFC5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 AP000997.3-201ENST00000623333 2250 ntBASIC16.23■□□□□ 0.19
TMEM235A6NFC5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 AL512625.2-201ENST00000417533 625 ntBASIC16.23■□□□□ 0.19
TMEM235A6NFC5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 AC124283.5-201ENST00000624661 1809 ntBASIC16.23■□□□□ 0.19
TMEM235A6NFC5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TMEM235A6NFC5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 KRT8P8-201ENST00000434750 1448 ntBASIC16.22■□□□□ 0.19
TMEM235A6NFC5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 ABALON-201ENST00000629058 1903 ntBASIC16.22■□□□□ 0.19
TMEM235A6NFC5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 AC083906.6-201ENST00000641366 219 ntBASIC16.22■□□□□ 0.19
TMEM235A6NFC5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TMEM235A6NFC5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 AC006015.1-201ENST00000429970 570 ntBASIC16.21■□□□□ 0.19
TMEM235A6NFC5 AC073210.2-201ENST00000430369 194 ntBASIC16.21■□□□□ 0.19
TMEM235A6NFC5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TMEM235A6NFC5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms