Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 SNORA9.1-201ENST00000362412 131 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 RNA5SP308-201ENST00000362532 115 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 VTRNA1-2-201ENST00000365241 89 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 RNU1-11P-201ENST00000383975 164 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 Y_RNA.536-201ENST00000384621 113 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 SNORD38B-201ENST00000384690 67 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 MIR521-2-201ENST00000384818 87 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 MIR452-201ENST00000385020 85 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 RNU6-1246P-201ENST00000391064 107 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 SNORA77.2-201ENST00000408571 112 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 RN7SKP286-201ENST00000410894 299 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 RPS26P5-201ENST00000418544 335 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 AC123900.1-201ENST00000420390 96 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 GAPDHP53-201ENST00000458397 924 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 RN7SL74P-201ENST00000464966 299 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 MT1L-202ENST00000566367 78 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 MIR4502-201ENST00000580432 81 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 IGLCOR22-2-201ENST00000605398 313 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 U1.22-201ENST00000605806 164 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 MIR6748-201ENST00000610433 71 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 RN7SL680P-201ENST00000620379 299 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 MIR6719-201ENST00000622428 87 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 AC087894.3-201ENST00000623682 349 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 AC008626.2-201ENST00000624425 248 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 SNORD38B-202ENST00000625943 69 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 AC007126.1-201ENST00000508202 4781 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 NDUFS1-203ENST00000432169 2080 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 ZNF185-201ENST00000318504 4148 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 AC020904.2-202ENST00000614660 1401 ntBASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
KRTAP4-11Q9BYQ6 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 Z83843.1-201ENST00000604070 3685 ntBASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 RBM18-201ENST00000417201 4974 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 TRIM39-202ENST00000376659 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 NHLRC3-202ENST00000379600 3549 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
KRTAP4-11Q9BYQ6 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms