RNA–Protein interactions for RNA: ENST00000365241.1

VTRNA1-2-201, vault RNA 1-2, humanhuman

BASIC

Gene VTRNA1-2, Length 89 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTRNA1-2-201ENST00000365241 NISCHQ9Y2I1 1504 aa17.85■□□□□ 0.45
VTRNA1-2-201ENST00000365241 CCDC180Q9P1Z9 1646 aa15.22■□□□□ 0.03
VTRNA1-2-201ENST00000365241 ZCCHC6Q5VYS8 1495 aaKnown RBP15.14■□□□□ 0.01
VTRNA1-2-201ENST00000365241 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
VTRNA1-2-201ENST00000365241 SUPT5HO00267 1087 aaKnown RBP14.89□□□□□ -0.03
VTRNA1-2-201ENST00000365241 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
VTRNA1-2-201ENST00000365241 CHIC1Q5VXU3 224 aa14.76□□□□□ -0.05
VTRNA1-2-201ENST00000365241 HRCP23327 699 aa14.73□□□□□ -0.05
VTRNA1-2-201ENST00000365241 ABCC9O60706 1549 aa14.67□□□□□ -0.06
VTRNA1-2-201ENST00000365241 MYO15BQ96JP2 1530 aa14.65□□□□□ -0.06
VTRNA1-2-201ENST00000365241 DCAF8L2P0C7V8 631 aa14.39□□□□□ -0.11
VTRNA1-2-201ENST00000365241 PCGF6Q9BYE7 350 aa14.39□□□□□ -0.11
VTRNA1-2-201ENST00000365241 TRIM26Q12899 539 aaPredicted RBP14.28□□□□□ -0.12
VTRNA1-2-201ENST00000365241 ZEB1P37275 1124 aaPredicted RBP14.22□□□□□ -0.13
VTRNA1-2-201ENST00000365241 LOC105371045A0A1W2PR82 267 aa14.17□□□□□ -0.14
VTRNA1-2-201ENST00000365241 RSF1Q96T23 1441 aaPredicted RBP14.15□□□□□ -0.14
VTRNA1-2-201ENST00000365241 RB1CC1Q8TDY2 1594 aa14.13□□□□□ -0.15
VTRNA1-2-201ENST00000365241 PPARGC1BQ86YN6 1023 aaKnown RBP14.12□□□□□ -0.15
VTRNA1-2-201ENST00000365241 SCRIBQ14160 1630 aa14.01□□□□□ -0.17
VTRNA1-2-201ENST00000365241 TRIM41Q8WV44 630 aa14□□□□□ -0.17
VTRNA1-2-201ENST00000365241 NACADO15069 1562 aa13.99□□□□□ -0.17
VTRNA1-2-201ENST00000365241 PELP1Q8IZL8 1130 aaKnown RBP13.95□□□□□ -0.18
VTRNA1-2-201ENST00000365241 MROH2BQ7Z745 1585 aa13.79□□□□□ -0.2
VTRNA1-2-201ENST00000365241 BAZ1AQ9NRL2 1556 aaPredicted RBP13.78□□□□□ -0.2
VTRNA1-2-201ENST00000365241 CECR2Q9BXF3 1484 aa13.75□□□□□ -0.21
VTRNA1-2-201ENST00000365241 EIF4G1Q04637 1599 aaKnown RBP13.75□□□□□ -0.21
VTRNA1-2-201ENST00000365241 DNAJC5BQ9UF47 199 aa13.74□□□□□ -0.21
VTRNA1-2-201ENST00000365241 WIZO95785 1651 aa13.72□□□□□ -0.21
VTRNA1-2-201ENST00000365241 FAM9AQ8IZU1 332 aaPredicted RBP13.69□□□□□ -0.22
VTRNA1-2-201ENST00000365241 UNC13AQ9UPW8 1703 aa13.68□□□□□ -0.22
VTRNA1-2-201ENST00000365241 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
VTRNA1-2-201ENST00000365241 WRNQ14191 1432 aaPredicted RBP eCLIP13.67□□□□□ -0.22
VTRNA1-2-201ENST00000365241 BICRAQ9NZM4 1560 aa13.66□□□□□ -0.22
VTRNA1-2-201ENST00000365241 TOP2AP11388 1531 aaKnown RBP13.63□□□□□ -0.23
VTRNA1-2-201ENST00000365241 EEA1Q15075 1411 aa13.61□□□□□ -0.23
VTRNA1-2-201ENST00000365241 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
VTRNA1-2-201ENST00000365241 TNIKQ9UKE5 1360 aa13.55□□□□□ -0.24
VTRNA1-2-201ENST00000365241 SMARCA4P51532 1647 aa13.53□□□□□ -0.24
VTRNA1-2-201ENST00000365241 CCER1Q8TC90 406 aaPredicted RBP13.53□□□□□ -0.24
VTRNA1-2-201ENST00000365241 SMARCA2P51531 1590 aa13.52□□□□□ -0.25
VTRNA1-2-201ENST00000365241 ACIN1Q9UKV3 1341 aaKnown RBP13.51□□□□□ -0.25
VTRNA1-2-201ENST00000365241 CCDC88BA6NC98 1476 aa13.49□□□□□ -0.25
VTRNA1-2-201ENST00000365241 CENPBP07199 599 aaPredicted RBP13.47□□□□□ -0.25
VTRNA1-2-201ENST00000365241 CEP162Q5TB80 1403 aa13.47□□□□□ -0.25
VTRNA1-2-201ENST00000365241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.45□□□□□ -0.26
VTRNA1-2-201ENST00000365241 DIEXFQ68CQ4 756 aaKnown RBP13.42□□□□□ -0.26
VTRNA1-2-201ENST00000365241 ABCC8Q09428 1581 aa13.41□□□□□ -0.26
VTRNA1-2-201ENST00000365241 MYT1Q01538 1121 aa13.41□□□□□ -0.26
VTRNA1-2-201ENST00000365241 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
VTRNA1-2-201ENST00000365241 GOLGA3Q08378 1498 aa13.4□□□□□ -0.26
VTRNA1-2-201ENST00000365241 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
VTRNA1-2-201ENST00000365241 PEG3Q9GZU2 1588 aa13.37□□□□□ -0.27
VTRNA1-2-201ENST00000365241 KIF21BO75037 1637 aa13.35□□□□□ -0.27
VTRNA1-2-201ENST00000365241 ZNF316A6NFI3 1004 aaPredicted RBP13.35□□□□□ -0.27
VTRNA1-2-201ENST00000365241 NEUROD1Q13562 356 aa13.35□□□□□ -0.27
VTRNA1-2-201ENST00000365241 SOGA1O94964 1423 aa13.35□□□□□ -0.27
VTRNA1-2-201ENST00000365241 CEP164Q9UPV0 1460 aa13.31□□□□□ -0.28
VTRNA1-2-201ENST00000365241 BAZ1BQ9UIG0 1483 aaKnown RBP13.29□□□□□ -0.28
VTRNA1-2-201ENST00000365241 CC2D2AQ9P2K1 1620 aa13.28□□□□□ -0.28
VTRNA1-2-201ENST00000365241 UBTFP17480 764 aaKnown RBP13.26□□□□□ -0.29
VTRNA1-2-201ENST00000365241 GTF3C3Q9Y5Q9 886 aa13.26□□□□□ -0.29
VTRNA1-2-201ENST00000365241 RUSC2Q8N2Y8 1516 aa13.25□□□□□ -0.29
VTRNA1-2-201ENST00000365241 VPS8Q8N3P4 1428 aa13.21□□□□□ -0.3
VTRNA1-2-201ENST00000365241 CLSPNQ9HAW4 1339 aa13.2□□□□□ -0.3
VTRNA1-2-201ENST00000365241 CLIP1P30622 1438 aa13.19□□□□□ -0.3
VTRNA1-2-201ENST00000365241 SYNJ1O43426 1573 aa13.18□□□□□ -0.3
VTRNA1-2-201ENST00000365241 APLP2Q06481 763 aa13.12□□□□□ -0.31
VTRNA1-2-201ENST00000365241 ATAD2BQ9ULI0 1458 aa13.11□□□□□ -0.31
VTRNA1-2-201ENST00000365241 ERICH3Q5RHP9 1530 aa13.11□□□□□ -0.31
VTRNA1-2-201ENST00000365241 TOP2BQ02880 1626 aa13.1□□□□□ -0.31
VTRNA1-2-201ENST00000365241 BIVM-ERCC5R4GMW8 1640 aa13.1□□□□□ -0.31
VTRNA1-2-201ENST00000365241 TTBK1Q5TCY1 1321 aaPredicted RBP13.06□□□□□ -0.32
VTRNA1-2-201ENST00000365241 MIER1Q8N108 512 aa13.05□□□□□ -0.32
VTRNA1-2-201ENST00000365241 RAPGEF2Q9Y4G8 1499 aa13.04□□□□□ -0.32
VTRNA1-2-201ENST00000365241 HNRNPUL2Q1KMD3 747 aaKnown RBP13.04□□□□□ -0.32
VTRNA1-2-201ENST00000365241 PRXQ9BXM0 1461 aa13.02□□□□□ -0.33
VTRNA1-2-201ENST00000365241 CUX2O14529 1486 aa12.99□□□□□ -0.33
VTRNA1-2-201ENST00000365241 RRBP1Q9P2E9 1410 aaKnown RBP12.97□□□□□ -0.33
VTRNA1-2-201ENST00000365241 DHX57Q6P158 1386 aaKnown RBP12.97□□□□□ -0.33
VTRNA1-2-201ENST00000365241 ARAP1Q96P48 1450 aa12.95□□□□□ -0.34
VTRNA1-2-201ENST00000365241 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
VTRNA1-2-201ENST00000365241 HMGXB3Q12766 1538 aa12.93□□□□□ -0.34
VTRNA1-2-201ENST00000365241 MAP3K1Q13233 1512 aa12.92□□□□□ -0.34
VTRNA1-2-201ENST00000365241 YTHDC1Q96MU7 727 aaKnown RBP12.91□□□□□ -0.34
VTRNA1-2-201ENST00000365241 KIF27Q86VH2 1401 aa12.89□□□□□ -0.35
VTRNA1-2-201ENST00000365241 PRDM2Q13029 1718 aa12.85□□□□□ -0.35
VTRNA1-2-201ENST00000365241 CUX1P39880 1505 aa12.84□□□□□ -0.35
VTRNA1-2-201ENST00000365241 CCNB3Q8WWL7 1395 aa12.83□□□□□ -0.36
VTRNA1-2-201ENST00000365241 TIMELESSQ9UNS1 1208 aa12.81□□□□□ -0.36
VTRNA1-2-201ENST00000365241 CFTRP13569 1480 aa12.8□□□□□ -0.36
VTRNA1-2-201ENST00000365241 ARHGAP35Q9NRY4 1499 aa12.8□□□□□ -0.36
VTRNA1-2-201ENST00000365241 KANK4Q5T7N3 995 aaPredicted RBP12.8□□□□□ -0.36
VTRNA1-2-201ENST00000365241 SUPT16HQ9Y5B9 1047 aaKnown RBP12.76□□□□□ -0.37
VTRNA1-2-201ENST00000365241 TIAM1Q13009 1591 aa12.76□□□□□ -0.37
VTRNA1-2-201ENST00000365241 SETD5Q9C0A6 1442 aa12.73□□□□□ -0.37
VTRNA1-2-201ENST00000365241 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.72□□□□□ -0.37
VTRNA1-2-201ENST00000365241 MAPKBP1O60336 1514 aa12.72□□□□□ -0.37
VTRNA1-2-201ENST00000365241 FHAD1B1AJZ9 1412 aa12.71□□□□□ -0.38
VTRNA1-2-201ENST00000365241 CFAP43Q8NDM7 1665 aa12.7□□□□□ -0.38
VTRNA1-2-201ENST00000365241 RAB3GAP2Q9H2M9 1393 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms