RNA–Protein interactions for RNA: ENST00000610727.1

PRKCQ-204, Transcript of protein kinase C theta, humanhuman

TSL 5 BASIC

Gene PRKCQ, Length 3,077 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-204ENST00000610727 NISCHQ9Y2I1 1504 aa16.88■□□□□ 0.29
PRKCQ-204ENST00000610727 DCAF8L2P0C7V8 631 aa14.68□□□□□ -0.06
PRKCQ-204ENST00000610727 CCDC180Q9P1Z9 1646 aa14.46□□□□□ -0.09
PRKCQ-204ENST00000610727 ABCC9O60706 1549 aa14.36□□□□□ -0.11
PRKCQ-204ENST00000610727 SHROOM4Q9ULL8 1493 aa14.26□□□□□ -0.13
PRKCQ-204ENST00000610727 ZCCHC6Q5VYS8 1495 aaKnown RBP14.09□□□□□ -0.15
PRKCQ-204ENST00000610727 PABPN1Q86U42 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
PRKCQ-204ENST00000610727 SUPT5HO00267 1087 aaKnown RBP13.71□□□□□ -0.21
PRKCQ-204ENST00000610727 SCRIBQ14160 1630 aa13.7□□□□□ -0.22
PRKCQ-204ENST00000610727 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
PRKCQ-204ENST00000610727 NACADO15069 1562 aa13.64□□□□□ -0.23
PRKCQ-204ENST00000610727 RB1CC1Q8TDY2 1594 aa13.6□□□□□ -0.23
PRKCQ-204ENST00000610727 MYO15BQ96JP2 1530 aa13.52□□□□□ -0.24
PRKCQ-204ENST00000610727 CECR2Q9BXF3 1484 aa13.35□□□□□ -0.27
PRKCQ-204ENST00000610727 UNC13AQ9UPW8 1703 aa13.29□□□□□ -0.28
PRKCQ-204ENST00000610727 BICRAQ9NZM4 1560 aa13.25□□□□□ -0.29
PRKCQ-204ENST00000610727 RSF1Q96T23 1441 aaPredicted RBP13.18□□□□□ -0.3
PRKCQ-204ENST00000610727 MROH2BQ7Z745 1585 aa13.16□□□□□ -0.3
PRKCQ-204ENST00000610727 PELP1Q8IZL8 1130 aaKnown RBP13.03□□□□□ -0.32
PRKCQ-204ENST00000610727 WIZO95785 1651 aa13.02□□□□□ -0.33
PRKCQ-204ENST00000610727 BAZ1AQ9NRL2 1556 aaPredicted RBP12.99□□□□□ -0.33
PRKCQ-204ENST00000610727 DNAJC5BQ9UF47 199 aa12.96□□□□□ -0.33
PRKCQ-204ENST00000610727 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
PRKCQ-204ENST00000610727 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.34
PRKCQ-204ENST00000610727 HRCP23327 699 aa12.88□□□□□ -0.35
PRKCQ-204ENST00000610727 ATAD2BQ9ULI0 1458 aa12.87□□□□□ -0.35
PRKCQ-204ENST00000610727 CHIC1Q5VXU3 224 aa12.84□□□□□ -0.35
PRKCQ-204ENST00000610727 BAZ1BQ9UIG0 1483 aaKnown RBP12.82□□□□□ -0.36
PRKCQ-204ENST00000610727 EHMT2Q96KQ7 1210 aa12.78□□□□□ -0.36
PRKCQ-204ENST00000610727 CCDC88BA6NC98 1476 aa12.78□□□□□ -0.36
PRKCQ-204ENST00000610727 CC2D2AQ9P2K1 1620 aa12.77□□□□□ -0.36
PRKCQ-204ENST00000610727 FAM9AQ8IZU1 332 aaPredicted RBP12.75□□□□□ -0.37
PRKCQ-204ENST00000610727 TRIM41Q8WV44 630 aa12.73□□□□□ -0.37
PRKCQ-204ENST00000610727 SMARCA2P51531 1590 aa12.72□□□□□ -0.37
PRKCQ-204ENST00000610727 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
PRKCQ-204ENST00000610727 NCAPD3P42695 1498 aa12.7□□□□□ -0.38
PRKCQ-204ENST00000610727 MYT1Q01538 1121 aa12.67□□□□□ -0.38
PRKCQ-204ENST00000610727 PEG3Q9GZU2 1588 aa12.64□□□□□ -0.39
PRKCQ-204ENST00000610727 LOC105371045A0A1W2PR82 267 aa12.58□□□□□ -0.4
PRKCQ-204ENST00000610727 ABCC8Q09428 1581 aa12.56□□□□□ -0.4
PRKCQ-204ENST00000610727 NESP48681 1621 aa12.56□□□□□ -0.4
PRKCQ-204ENST00000610727 HMGXB3Q12766 1538 aa12.54□□□□□ -0.4
PRKCQ-204ENST00000610727 PPARGC1BQ86YN6 1023 aaKnown RBP12.5□□□□□ -0.41
PRKCQ-204ENST00000610727 CADPSQ9ULU8 1353 aa12.49□□□□□ -0.41
PRKCQ-204ENST00000610727 CFTRP13569 1480 aa12.42□□□□□ -0.42
PRKCQ-204ENST00000610727 WRNQ14191 1432 aaPredicted RBP eCLIP12.42□□□□□ -0.42
PRKCQ-204ENST00000610727 PCGF6Q9BYE7 350 aa12.39□□□□□ -0.43
PRKCQ-204ENST00000610727 RANGAP1P46060 587 aaPredicted RBP12.38□□□□□ -0.43
PRKCQ-204ENST00000610727 SOGA1O94964 1423 aa12.37□□□□□ -0.43
PRKCQ-204ENST00000610727 FANCD2Q9BXW9 1451 aa12.35□□□□□ -0.43
PRKCQ-204ENST00000610727 RUSC2Q8N2Y8 1516 aa12.34□□□□□ -0.43
PRKCQ-204ENST00000610727 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.44
PRKCQ-204ENST00000610727 SYNJ1O43426 1573 aa12.31□□□□□ -0.44
PRKCQ-204ENST00000610727 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
PRKCQ-204ENST00000610727 UBTFP17480 764 aaKnown RBP12.27□□□□□ -0.44
PRKCQ-204ENST00000610727 ERCC6Q03468 1493 aa12.27□□□□□ -0.45
PRKCQ-204ENST00000610727 CSRNP3Q8WYN3 585 aa12.26□□□□□ -0.45
PRKCQ-204ENST00000610727 CUX1P39880 1505 aa12.26□□□□□ -0.45
PRKCQ-204ENST00000610727 CEP164Q9UPV0 1460 aa12.24□□□□□ -0.45
PRKCQ-204ENST00000610727 RAD54L2Q9Y4B4 1467 aa12.23□□□□□ -0.45
PRKCQ-204ENST00000610727 TDRD9Q8NDG6 1382 aaKnown RBP12.21□□□□□ -0.45
PRKCQ-204ENST00000610727 LAMC3Q9Y6N6 1575 aa12.2□□□□□ -0.46
PRKCQ-204ENST00000610727 FGD5Q6ZNL6 1462 aa12.19□□□□□ -0.46
PRKCQ-204ENST00000610727 URB2Q14146 1524 aaKnown RBP12.19□□□□□ -0.46
PRKCQ-204ENST00000610727 TOPBP1Q92547 1522 aa12.16□□□□□ -0.46
PRKCQ-204ENST00000610727 CUX2O14529 1486 aa12.16□□□□□ -0.46
PRKCQ-204ENST00000610727 KIF21AQ7Z4S6 1674 aa12.15□□□□□ -0.46
PRKCQ-204ENST00000610727 TTBK1Q5TCY1 1321 aaPredicted RBP12.15□□□□□ -0.47
PRKCQ-204ENST00000610727 TOP2BQ02880 1626 aa12.14□□□□□ -0.47
PRKCQ-204ENST00000610727 POLA1P09884 1462 aaPredicted RBP12.13□□□□□ -0.47
PRKCQ-204ENST00000610727 FBLN2P98095 1184 aa12.13□□□□□ -0.47
PRKCQ-204ENST00000610727 AQRO60306 1485 aaKnown RBP eCLIP12.09□□□□□ -0.472e-7■■■■■ 38
PRKCQ-204ENST00000610727 KIF27Q86VH2 1401 aa12.09□□□□□ -0.47
PRKCQ-204ENST00000610727 MRC2Q9UBG0 1479 aa12.07□□□□□ -0.48
PRKCQ-204ENST00000610727 IGF1RP08069 1367 aa12.06□□□□□ -0.48
PRKCQ-204ENST00000610727 P3H3Q8IVL6 736 aa12.06□□□□□ -0.48
PRKCQ-204ENST00000610727 DNMBPQ6XZF7 1577 aa12.06□□□□□ -0.48
PRKCQ-204ENST00000610727 RAPGEF2Q9Y4G8 1499 aa12.05□□□□□ -0.48
PRKCQ-204ENST00000610727 ZEB1P37275 1124 aaPredicted RBP12.05□□□□□ -0.48
PRKCQ-204ENST00000610727 ZNF608Q9ULD9 1512 aaPredicted RBP12.04□□□□□ -0.48
PRKCQ-204ENST00000610727 BIVM-ERCC5R4GMW8 1640 aa12.04□□□□□ -0.48
PRKCQ-204ENST00000610727 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
PRKCQ-204ENST00000610727 CARMIL1Q5VZK9 1371 aa12.02□□□□□ -0.49
PRKCQ-204ENST00000610727 EEA1Q15075 1411 aa11.98□□□□□ -0.49
PRKCQ-204ENST00000610727 ATP1B4Q9UN42 357 aaPredicted RBP11.97□□□□□ -0.49
PRKCQ-204ENST00000610727 GAPVD1Q14C86 1478 aa11.97□□□□□ -0.49
PRKCQ-204ENST00000610727 TRIM26Q12899 539 aaPredicted RBP11.97□□□□□ -0.49
PRKCQ-204ENST00000610727 ACIN1Q9UKV3 1341 aaKnown RBP11.97□□□□□ -0.49
PRKCQ-204ENST00000610727 CHMP7Q8WUX9 453 aaPredicted RBP11.95□□□□□ -0.5
PRKCQ-204ENST00000610727 ABCA10Q8WWZ4 1543 aa11.95□□□□□ -0.5
PRKCQ-204ENST00000610727 GOLGA3Q08378 1498 aa11.94□□□□□ -0.5
PRKCQ-204ENST00000610727 CEP162Q5TB80 1403 aa11.93□□□□□ -0.5
PRKCQ-204ENST00000610727 WDR62O43379 1518 aa11.91□□□□□ -0.5
PRKCQ-204ENST00000610727 ARID3CA6NKF2 412 aa11.91□□□□□ -0.5
PRKCQ-204ENST00000610727 TNIKQ9UKE5 1360 aa11.91□□□□□ -0.5
PRKCQ-204ENST00000610727 PRXQ9BXM0 1461 aa11.91□□□□□ -0.5
PRKCQ-204ENST00000610727 THOC2Q8NI27 1593 aaKnown RBP11.9□□□□□ -0.5
PRKCQ-204ENST00000610727 IFT140Q96RY7 1462 aa11.89□□□□□ -0.51
PRKCQ-204ENST00000610727 TARBP1Q13395 1621 aaKnown RBP11.88□□□□□ -0.51
PRKCQ-204ENST00000610727 CLIP1P30622 1438 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms