RNA–Protein interactions for RNA: ENST00000370314.8

GABRA3-201, Transcript of gamma-aminobutyric acid type A receptor alpha3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA3, Length 3,712 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3-201ENST00000370314 NISCHQ9Y2I1 1504 aa11.11□□□□□ -0.63
GABRA3-201ENST00000370314 CCDC180Q9P1Z9 1646 aa10.57□□□□□ -0.72
GABRA3-201ENST00000370314 SLC24A1O60721 1099 aa10.56□□□□□ -0.72
GABRA3-201ENST00000370314 ABCC9O60706 1549 aa10.39□□□□□ -0.75
GABRA3-201ENST00000370314 DNAJC5BQ9UF47 199 aa10.34□□□□□ -0.75
GABRA3-201ENST00000370314 UNC13AQ9UPW8 1703 aa10.12□□□□□ -0.79
GABRA3-201ENST00000370314 RB1CC1Q8TDY2 1594 aa10.02□□□□□ -0.81
GABRA3-201ENST00000370314 BICRAQ9NZM4 1560 aa9.96□□□□□ -0.81
GABRA3-201ENST00000370314 EHMT2Q96KQ7 1210 aa9.96□□□□□ -0.82
GABRA3-201ENST00000370314 DNAJC5Q9H3Z4 198 aa9.94□□□□□ -0.82
GABRA3-201ENST00000370314 SHROOM4Q9ULL8 1493 aa9.92□□□□□ -0.82
GABRA3-201ENST00000370314 NACADO15069 1562 aa9.91□□□□□ -0.82
GABRA3-201ENST00000370314 MYO15BQ96JP2 1530 aa9.87□□□□□ -0.83
GABRA3-201ENST00000370314 PLPPR3Q6T4P5 718 aa9.84□□□□□ -0.83
GABRA3-201ENST00000370314 CHIC1Q5VXU3 224 aa9.78□□□□□ -0.84
GABRA3-201ENST00000370314 CC2D2AQ9P2K1 1620 aa9.7□□□□□ -0.86
GABRA3-201ENST00000370314 RTN4Q9NQC3 1192 aaKnown RBP9.62□□□□□ -0.87
GABRA3-201ENST00000370314 CUX2O14529 1486 aa9.6□□□□□ -0.87
GABRA3-201ENST00000370314 EIF4G1Q04637 1599 aaKnown RBP9.57□□□□□ -0.88
GABRA3-201ENST00000370314 CECR2Q9BXF3 1484 aa9.55□□□□□ -0.88
GABRA3-201ENST00000370314 DAXXQ9UER7 740 aaPredicted RBP9.47□□□□□ -0.89
GABRA3-201ENST00000370314 DCAF1Q9Y4B6 1507 aa9.47□□□□□ -0.89
GABRA3-201ENST00000370314 PRKCSHP14314 528 aaPredicted RBP9.38□□□□□ -0.91
GABRA3-201ENST00000370314 THOC2Q8NI27 1593 aaKnown RBP9.33□□□□□ -0.92
GABRA3-201ENST00000370314 NCBP3Q53F19 620 aaKnown RBP9.31□□□□□ -0.92
GABRA3-201ENST00000370314 PABPN1Q86U42 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
GABRA3-201ENST00000370314 AEBP2Q6ZN18 517 aaPredicted RBP9.31□□□□□ -0.92
GABRA3-201ENST00000370314 KCNA4P22459 653 aa9.25□□□□□ -0.93
GABRA3-201ENST00000370314 ZCCHC6Q5VYS8 1495 aaKnown RBP9.18□□□□□ -0.94
GABRA3-201ENST00000370314 CSRNP3Q8WYN3 585 aa9.15□□□□□ -0.94
GABRA3-201ENST00000370314 TIMELESSQ9UNS1 1208 aa9.1□□□□□ -0.95
GABRA3-201ENST00000370314 HMGXB3Q12766 1538 aa9.1□□□□□ -0.95
GABRA3-201ENST00000370314 NCAPD3P42695 1498 aa9.1□□□□□ -0.95
GABRA3-201ENST00000370314 APLP2Q06481 763 aa9.09□□□□□ -0.95
GABRA3-201ENST00000370314 SCRIBQ14160 1630 aa9.06□□□□□ -0.96
GABRA3-201ENST00000370314 AMER1Q5JTC6 1135 aaPredicted RBP9.06□□□□□ -0.96
GABRA3-201ENST00000370314 PHF23Q9BUL5 403 aaPredicted RBP9.06□□□□□ -0.96
GABRA3-201ENST00000370314 PEG3Q9GZU2 1588 aa9.04□□□□□ -0.96
GABRA3-201ENST00000370314 KIF21AQ7Z4S6 1674 aa9.04□□□□□ -0.96
GABRA3-201ENST00000370314 LAMC3Q9Y6N6 1575 aa9.03□□□□□ -0.96
GABRA3-201ENST00000370314 WDR62O43379 1518 aa9.01□□□□□ -0.97
GABRA3-201ENST00000370314 BAZ1AQ9NRL2 1556 aaPredicted RBP8.99□□□□□ -0.97
GABRA3-201ENST00000370314 PELP1Q8IZL8 1130 aaKnown RBP8.97□□□□□ -0.97
GABRA3-201ENST00000370314 RIMBP3CA6NJZ7 1639 aa8.96□□□□□ -0.98
GABRA3-201ENST00000370314 RIMBP3BA6NNM3 1639 aa8.96□□□□□ -0.98
GABRA3-201ENST00000370314 RIMBP3Q9UFD9 1639 aa8.96□□□□□ -0.98
GABRA3-201ENST00000370314 SMARCA2P51531 1590 aa8.95□□□□□ -0.98
GABRA3-201ENST00000370314 TULP1O00294 542 aaPredicted RBP8.92□□□□□ -0.98
GABRA3-201ENST00000370314 ERCC6Q03468 1493 aa8.91□□□□□ -0.98
GABRA3-201ENST00000370314 MYT1Q01538 1121 aa8.9□□□□□ -0.98
GABRA3-201ENST00000370314 ATAD2BQ9ULI0 1458 aa8.89□□□□□ -0.99
GABRA3-201ENST00000370314 NESP48681 1621 aa8.88□□□□□ -0.99
GABRA3-201ENST00000370314 SMARCA4P51532 1647 aa8.85□□□□□ -0.99
GABRA3-201ENST00000370314 ERICH6Q7L0X2 663 aa8.85□□□□□ -0.99
GABRA3-201ENST00000370314 ARXQ96QS3 562 aa8.85□□□□□ -0.99
GABRA3-201ENST00000370314 KLHL34Q8N239 644 aa8.84□□□□□ -0.99
GABRA3-201ENST00000370314 TAOK2Q9UL54 1235 aa8.82□□□□□ -1
GABRA3-201ENST00000370314 TTBK1Q5TCY1 1321 aaPredicted RBP8.82□□□□□ -1
GABRA3-201ENST00000370314 MRC2Q9UBG0 1479 aa8.79□□□□□ -1
GABRA3-201ENST00000370314 PLEKHG5O94827 1062 aa8.79□□□□□ -1
GABRA3-201ENST00000370314 PRDM2Q13029 1718 aa8.78□□□□□ -1
GABRA3-201ENST00000370314 ARHGEF11O15085 1522 aa8.76□□□□□ -1.01
GABRA3-201ENST00000370314 TPRNQ4KMQ1 711 aa8.73□□□□□ -1.01
GABRA3-201ENST00000370314 PDS5BQ9NTI5 1447 aa8.69□□□□□ -1.02
GABRA3-201ENST00000370314 TRIM41Q8WV44 630 aa8.68□□□□□ -1.02
GABRA3-201ENST00000370314 ARAP1Q96P48 1450 aa8.66□□□□□ -1.02
GABRA3-201ENST00000370314 PODXL2Q9NZ53 605 aa8.66□□□□□ -1.02
GABRA3-201ENST00000370314 EIF5BO60841 1220 aaKnown RBP8.64□□□□□ -1.03
GABRA3-201ENST00000370314 CLASP1Q7Z460 1538 aa8.63□□□□□ -1.03
GABRA3-201ENST00000370314 CHD1O14646 1710 aa8.62□□□□□ -1.03
GABRA3-201ENST00000370314 BCL11AQ9H165 835 aa8.62□□□□□ -1.03
GABRA3-201ENST00000370314 RSF1Q96T23 1441 aaPredicted RBP8.61□□□□□ -1.03
GABRA3-201ENST00000370314 BAZ1BQ9UIG0 1483 aaKnown RBP8.61□□□□□ -1.03
GABRA3-201ENST00000370314 RANGAP1P46060 587 aaPredicted RBP8.6□□□□□ -1.03
GABRA3-201ENST00000370314 HOMEZQ8IX15 550 aa8.6□□□□□ -1.03
GABRA3-201ENST00000370314 WDR97A6NE52 1622 aa8.6□□□□□ -1.03
GABRA3-201ENST00000370314 URB2Q14146 1524 aaKnown RBP8.58□□□□□ -1.04
GABRA3-201ENST00000370314 CADPSQ9ULU8 1353 aa8.57□□□□□ -1.04
GABRA3-201ENST00000370314 KIF13AQ9H1H9 1805 aa8.56□□□□□ -1.04
GABRA3-201ENST00000370314 TARBP1Q13395 1621 aaKnown RBP8.55□□□□□ -1.04
GABRA3-201ENST00000370314 OSCARQ8IYS5 282 aa8.54□□□□□ -1.04
GABRA3-201ENST00000370314 BCANQ96GW7 911 aa8.54□□□□□ -1.04
GABRA3-201ENST00000370314 EIF4G3O43432 1585 aaKnown RBP8.54□□□□□ -1.04
GABRA3-201ENST00000370314 CFTRP13569 1480 aa8.53□□□□□ -1.04
GABRA3-201ENST00000370314 CEP164Q9UPV0 1460 aa8.53□□□□□ -1.04
GABRA3-201ENST00000370314 SLC4A1APQ9BWU0 796 aaKnown RBP8.52□□□□□ -1.05
GABRA3-201ENST00000370314 FAM9AQ8IZU1 332 aaPredicted RBP8.52□□□□□ -1.05
GABRA3-201ENST00000370314 GTF3C3Q9Y5Q9 886 aa8.5□□□□□ -1.05
GABRA3-201ENST00000370314 PLCB2Q00722 1185 aa8.49□□□□□ -1.05
GABRA3-201ENST00000370314 IFT140Q96RY7 1462 aa8.48□□□□□ -1.05
GABRA3-201ENST00000370314 FANCD2Q9BXW9 1451 aa8.47□□□□□ -1.05
GABRA3-201ENST00000370314 MROH2BQ7Z745 1585 aa8.46□□□□□ -1.05
GABRA3-201ENST00000370314 DCAF8L2P0C7V8 631 aa8.45□□□□□ -1.06
GABRA3-201ENST00000370314 HAP1P54257 671 aaPredicted RBP8.45□□□□□ -1.06
GABRA3-201ENST00000370314 ZBTB22O15209 634 aa8.45□□□□□ -1.06
GABRA3-201ENST00000370314 SHROOM2Q13796 1616 aa8.43□□□□□ -1.06
GABRA3-201ENST00000370314 ZNF608Q9ULD9 1512 aaPredicted RBP8.42□□□□□ -1.06
GABRA3-201ENST00000370314 ERCC6L2Q5T890 1561 aa8.41□□□□□ -1.06
GABRA3-201ENST00000370314 NPM2Q86SE8 214 aaKnown RBP8.39□□□□□ -1.07
GABRA3-201ENST00000370314 DNMBPQ6XZF7 1577 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms