RNA–Protein interactions for RNA: ENST00000383975.1

RNU1-11P-201, Transcript of RNA, U1 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU1-11P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-11P-201ENST00000383975 NISCHQ9Y2I1 1504 aa18.25■□□□□ 0.51
RNU1-11P-201ENST00000383975 CCDC180Q9P1Z9 1646 aa16.01■□□□□ 0.15
RNU1-11P-201ENST00000383975 ZCCHC6Q5VYS8 1495 aaKnown RBP15.27■□□□□ 0.03
RNU1-11P-201ENST00000383975 ABCC9O60706 1549 aa15.26■□□□□ 0.03
RNU1-11P-201ENST00000383975 DCAF1Q9Y4B6 1507 aa15.14■□□□□ 0.01
RNU1-11P-201ENST00000383975 DCAF8L2P0C7V8 631 aa15.14■□□□□ 0.01
RNU1-11P-201ENST00000383975 MYO15BQ96JP2 1530 aa15.06■□□□□ 0
RNU1-11P-201ENST00000383975 NACADO15069 1562 aa14.99□□□□□ -0.01
RNU1-11P-201ENST00000383975 RB1CC1Q8TDY2 1594 aa14.89□□□□□ -0.03
RNU1-11P-201ENST00000383975 SHROOM4Q9ULL8 1493 aa14.65□□□□□ -0.06
RNU1-11P-201ENST00000383975 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
RNU1-11P-201ENST00000383975 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
RNU1-11P-201ENST00000383975 BICRAQ9NZM4 1560 aa14.39□□□□□ -0.11
RNU1-11P-201ENST00000383975 PABPN1Q86U42 306 aaKnown RBP eCLIP14.37□□□□□ -0.11
RNU1-11P-201ENST00000383975 CECR2Q9BXF3 1484 aa14.15□□□□□ -0.14
RNU1-11P-201ENST00000383975 BAZ1AQ9NRL2 1556 aaPredicted RBP14.11□□□□□ -0.15
RNU1-11P-201ENST00000383975 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
RNU1-11P-201ENST00000383975 SUPT5HO00267 1087 aaKnown RBP14.07□□□□□ -0.16
RNU1-11P-201ENST00000383975 MROH2BQ7Z745 1585 aa14.05□□□□□ -0.16
RNU1-11P-201ENST00000383975 SMARCA4P51532 1647 aa14.04□□□□□ -0.16
RNU1-11P-201ENST00000383975 EIF4G1Q04637 1599 aaKnown RBP13.98□□□□□ -0.17
RNU1-11P-201ENST00000383975 PEG3Q9GZU2 1588 aa13.92□□□□□ -0.18
RNU1-11P-201ENST00000383975 WIZO95785 1651 aa13.91□□□□□ -0.18
RNU1-11P-201ENST00000383975 SMARCA2P51531 1590 aa13.9□□□□□ -0.18
RNU1-11P-201ENST00000383975 ATAD2BQ9ULI0 1458 aa13.88□□□□□ -0.19
RNU1-11P-201ENST00000383975 NCAPD3P42695 1498 aa13.85□□□□□ -0.19
RNU1-11P-201ENST00000383975 CC2D2AQ9P2K1 1620 aa13.82□□□□□ -0.2
RNU1-11P-201ENST00000383975 TOP2AP11388 1531 aaKnown RBP13.8□□□□□ -0.2
RNU1-11P-201ENST00000383975 BAZ1BQ9UIG0 1483 aaKnown RBP13.79□□□□□ -0.2
RNU1-11P-201ENST00000383975 HMGXB3Q12766 1538 aa13.77□□□□□ -0.21
RNU1-11P-201ENST00000383975 CCDC88BA6NC98 1476 aa13.67□□□□□ -0.22
RNU1-11P-201ENST00000383975 DNAJC5BQ9UF47 199 aa13.66□□□□□ -0.22
RNU1-11P-201ENST00000383975 CADPSQ9ULU8 1353 aa13.47□□□□□ -0.25
RNU1-11P-201ENST00000383975 CFTRP13569 1480 aa13.46□□□□□ -0.25
RNU1-11P-201ENST00000383975 CHIC1Q5VXU3 224 aa13.4□□□□□ -0.26
RNU1-11P-201ENST00000383975 LAMC3Q9Y6N6 1575 aa13.38□□□□□ -0.27
RNU1-11P-201ENST00000383975 PRDM2Q13029 1718 aa13.33□□□□□ -0.28
RNU1-11P-201ENST00000383975 NESP48681 1621 aa13.32□□□□□ -0.28
RNU1-11P-201ENST00000383975 PDS5BQ9NTI5 1447 aa13.31□□□□□ -0.28
RNU1-11P-201ENST00000383975 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
RNU1-11P-201ENST00000383975 FANCD2Q9BXW9 1451 aa13.28□□□□□ -0.28
RNU1-11P-201ENST00000383975 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
RNU1-11P-201ENST00000383975 ABCC8Q09428 1581 aa13.24□□□□□ -0.29
RNU1-11P-201ENST00000383975 CEP164Q9UPV0 1460 aa13.22□□□□□ -0.29
RNU1-11P-201ENST00000383975 TOP2BQ02880 1626 aa13.16□□□□□ -0.3
RNU1-11P-201ENST00000383975 CUX1P39880 1505 aa13.15□□□□□ -0.3
RNU1-11P-201ENST00000383975 SYNJ1O43426 1573 aa13.15□□□□□ -0.3
RNU1-11P-201ENST00000383975 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.31
RNU1-11P-201ENST00000383975 BIVM-ERCC5R4GMW8 1640 aa13.14□□□□□ -0.31
RNU1-11P-201ENST00000383975 ERCC6Q03468 1493 aa13.14□□□□□ -0.31
RNU1-11P-201ENST00000383975 DNMBPQ6XZF7 1577 aa13.12□□□□□ -0.31
RNU1-11P-201ENST00000383975 MRC2Q9UBG0 1479 aa13.11□□□□□ -0.31
RNU1-11P-201ENST00000383975 TOPBP1Q92547 1522 aa13.11□□□□□ -0.31
RNU1-11P-201ENST00000383975 URB2Q14146 1524 aaKnown RBP13.09□□□□□ -0.31
RNU1-11P-201ENST00000383975 FGD5Q6ZNL6 1462 aa13.04□□□□□ -0.32
RNU1-11P-201ENST00000383975 WDR62O43379 1518 aa13.03□□□□□ -0.32
RNU1-11P-201ENST00000383975 SOGA1O94964 1423 aa13.03□□□□□ -0.32
RNU1-11P-201ENST00000383975 EEA1Q15075 1411 aa13.03□□□□□ -0.32
RNU1-11P-201ENST00000383975 POLA1P09884 1462 aaPredicted RBP13.02□□□□□ -0.33
RNU1-11P-201ENST00000383975 THOC2Q8NI27 1593 aaKnown RBP13□□□□□ -0.33
RNU1-11P-201ENST00000383975 KIF27Q86VH2 1401 aa12.97□□□□□ -0.33
RNU1-11P-201ENST00000383975 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
RNU1-11P-201ENST00000383975 CSRNP3Q8WYN3 585 aa12.97□□□□□ -0.33
RNU1-11P-201ENST00000383975 ABCA10Q8WWZ4 1543 aa12.96□□□□□ -0.33
RNU1-11P-201ENST00000383975 RAD54L2Q9Y4B4 1467 aa12.96□□□□□ -0.34
RNU1-11P-201ENST00000383975 RUSC2Q8N2Y8 1516 aa12.94□□□□□ -0.34
RNU1-11P-201ENST00000383975 CUX2O14529 1486 aa12.94□□□□□ -0.34
RNU1-11P-201ENST00000383975 IFT140Q96RY7 1462 aa12.94□□□□□ -0.34
RNU1-11P-201ENST00000383975 TARBP1Q13395 1621 aaKnown RBP12.91□□□□□ -0.34
RNU1-11P-201ENST00000383975 IGF1RP08069 1367 aa12.88□□□□□ -0.35
RNU1-11P-201ENST00000383975 TDRD9Q8NDG6 1382 aaKnown RBP12.88□□□□□ -0.35
RNU1-11P-201ENST00000383975 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
RNU1-11P-201ENST00000383975 GAPVD1Q14C86 1478 aa12.86□□□□□ -0.35
RNU1-11P-201ENST00000383975 LOC105371045A0A1W2PR82 267 aa12.85□□□□□ -0.35
RNU1-11P-201ENST00000383975 ABCA5Q8WWZ7 1642 aa12.83□□□□□ -0.36
RNU1-11P-201ENST00000383975 AQRO60306 1485 aaKnown RBP eCLIP12.82□□□□□ -0.36
RNU1-11P-201ENST00000383975 ERICH3Q5RHP9 1530 aa12.82□□□□□ -0.36
RNU1-11P-201ENST00000383975 CARMIL1Q5VZK9 1371 aa12.81□□□□□ -0.36
RNU1-11P-201ENST00000383975 PRXQ9BXM0 1461 aa12.81□□□□□ -0.36
RNU1-11P-201ENST00000383975 ZNF608Q9ULD9 1512 aaPredicted RBP12.81□□□□□ -0.36
RNU1-11P-201ENST00000383975 GRIN2BQ13224 1484 aa12.8□□□□□ -0.36
RNU1-11P-201ENST00000383975 KIF21BO75037 1637 aa12.79□□□□□ -0.36
RNU1-11P-201ENST00000383975 GOLGA3Q08378 1498 aa12.78□□□□□ -0.36
RNU1-11P-201ENST00000383975 UBTFP17480 764 aaKnown RBP12.76□□□□□ -0.37
RNU1-11P-201ENST00000383975 RAPGEF2Q9Y4G8 1499 aa12.76□□□□□ -0.37
RNU1-11P-201ENST00000383975 CUL7Q14999 1698 aa12.76□□□□□ -0.37
RNU1-11P-201ENST00000383975 EIF4G3O43432 1585 aaKnown RBP12.75□□□□□ -0.37
RNU1-11P-201ENST00000383975 EHMT2Q96KQ7 1210 aa12.74□□□□□ -0.37
RNU1-11P-201ENST00000383975 PBRM1Q86U86 1689 aa12.73□□□□□ -0.37
RNU1-11P-201ENST00000383975 FHAD1B1AJZ9 1412 aa12.73□□□□□ -0.37
RNU1-11P-201ENST00000383975 TNIKQ9UKE5 1360 aa12.73□□□□□ -0.37
RNU1-11P-201ENST00000383975 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
RNU1-11P-201ENST00000383975 SNAPC4Q5SXM2 1469 aa12.68□□□□□ -0.38
RNU1-11P-201ENST00000383975 CHMP7Q8WUX9 453 aaPredicted RBP12.68□□□□□ -0.38
RNU1-11P-201ENST00000383975 SYNJ2O15056 1496 aa12.66□□□□□ -0.38
RNU1-11P-201ENST00000383975 ADAMTS12P58397 1594 aa12.66□□□□□ -0.38
RNU1-11P-201ENST00000383975 FBLN2P98095 1184 aa12.62□□□□□ -0.39
RNU1-11P-201ENST00000383975 GRIN2AQ12879 1464 aa12.61□□□□□ -0.39
RNU1-11P-201ENST00000383975 CEP162Q5TB80 1403 aa12.59□□□□□ -0.39
RNU1-11P-201ENST00000383975 CLIP1P30622 1438 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms