RNA–Protein interactions for RNA: ENST00000256447.5

CD180-201, Transcript of CD180 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD180, Length 5,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD180-201ENST00000256447 NISCHQ9Y2I1 1504 aa16.6■□□□□ 0.25
CD180-201ENST00000256447 SHROOM4Q9ULL8 1493 aa15.12■□□□□ 0.01
CD180-201ENST00000256447 SUPT5HO00267 1087 aaKnown RBP15□□□□□ -0.01
CD180-201ENST00000256447 DCAF8L2P0C7V8 631 aa14.93□□□□□ -0.02
CD180-201ENST00000256447 PCGF6Q9BYE7 350 aa14.34□□□□□ -0.11
CD180-201ENST00000256447 CHIC1Q5VXU3 224 aa14.17□□□□□ -0.14
CD180-201ENST00000256447 EHMT2Q96KQ7 1210 aa14.16□□□□□ -0.14
CD180-201ENST00000256447 HRCP23327 699 aa14.13□□□□□ -0.15
CD180-201ENST00000256447 PPARGC1BQ86YN6 1023 aaKnown RBP14.02□□□□□ -0.17
CD180-201ENST00000256447 LOC105371045A0A1W2PR82 267 aa14.01□□□□□ -0.17
CD180-201ENST00000256447 FAM9AQ8IZU1 332 aaPredicted RBP14□□□□□ -0.17
CD180-201ENST00000256447 ZCCHC6Q5VYS8 1495 aaKnown RBP13.98□□□□□ -0.17
CD180-201ENST00000256447 MYO15BQ96JP2 1530 aa13.94□□□□□ -0.18
CD180-201ENST00000256447 TRIM41Q8WV44 630 aa13.83□□□□□ -0.19
CD180-201ENST00000256447 TRIM26Q12899 539 aaPredicted RBP13.79□□□□□ -0.2
CD180-201ENST00000256447 CCDC180Q9P1Z9 1646 aa13.78□□□□□ -0.2
CD180-201ENST00000256447 TTBK1Q5TCY1 1321 aaPredicted RBP13.72□□□□□ -0.21
CD180-201ENST00000256447 ZEB1P37275 1124 aaPredicted RBP13.66□□□□□ -0.22
CD180-201ENST00000256447 DCAF1Q9Y4B6 1507 aa13.58□□□□□ -0.24
CD180-201ENST00000256447 CCER1Q8TC90 406 aaPredicted RBP13.54□□□□□ -0.24
CD180-201ENST00000256447 SCRIBQ14160 1630 aa13.48□□□□□ -0.25
CD180-201ENST00000256447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
CD180-201ENST00000256447 RANGAP1P46060 587 aaPredicted RBP13.34□□□□□ -0.27
CD180-201ENST00000256447 ABCC9O60706 1549 aa13.34□□□□□ -0.27
CD180-201ENST00000256447 UBTFP17480 764 aaKnown RBP13.33□□□□□ -0.27
CD180-201ENST00000256447 RSF1Q96T23 1441 aaPredicted RBP13.3□□□□□ -0.28
CD180-201ENST00000256447 PELP1Q8IZL8 1130 aaKnown RBP13.29□□□□□ -0.28
CD180-201ENST00000256447 CENPBP07199 599 aaPredicted RBP13.29□□□□□ -0.28
CD180-201ENST00000256447 YTHDC1Q96MU7 727 aaKnown RBP13.28□□□□□ -0.28
CD180-201ENST00000256447 APLP2Q06481 763 aa13.25□□□□□ -0.29
CD180-201ENST00000256447 RB1CC1Q8TDY2 1594 aa13.19□□□□□ -0.3
CD180-201ENST00000256447 DIEXFQ68CQ4 756 aaKnown RBP13.18□□□□□ -0.3
CD180-201ENST00000256447 SCAF1Q9H7N4 1312 aaKnown RBP13.16□□□□□ -0.3
CD180-201ENST00000256447 HNRNPUL2Q1KMD3 747 aaKnown RBP13.14□□□□□ -0.31
CD180-201ENST00000256447 GTF3C3Q9Y5Q9 886 aa13.08□□□□□ -0.32
CD180-201ENST00000256447 CECR2Q9BXF3 1484 aa13.07□□□□□ -0.32
CD180-201ENST00000256447 ACIN1Q9UKV3 1341 aaKnown RBP13.06□□□□□ -0.32
CD180-201ENST00000256447 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
CD180-201ENST00000256447 NEUROD1Q13562 356 aa13.01□□□□□ -0.33
CD180-201ENST00000256447 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
CD180-201ENST00000256447 CSRNP3Q8WYN3 585 aa12.95□□□□□ -0.34
CD180-201ENST00000256447 ZNF316A6NFI3 1004 aaPredicted RBP12.94□□□□□ -0.34
CD180-201ENST00000256447 WIZO95785 1651 aa12.94□□□□□ -0.34
CD180-201ENST00000256447 NACADO15069 1562 aa12.91□□□□□ -0.34
CD180-201ENST00000256447 ITGAEP38570 1179 aa12.9□□□□□ -0.34
CD180-201ENST00000256447 CEP162Q5TB80 1403 aa12.9□□□□□ -0.34
CD180-201ENST00000256447 ABCC8Q09428 1581 aa12.87□□□□□ -0.35
CD180-201ENST00000256447 ATP1B4Q9UN42 357 aaPredicted RBP12.85□□□□□ -0.35
CD180-201ENST00000256447 SOGA1O94964 1423 aa12.82□□□□□ -0.36
CD180-201ENST00000256447 CCDC88BA6NC98 1476 aa12.81□□□□□ -0.36
CD180-201ENST00000256447 BAZ1AQ9NRL2 1556 aaPredicted RBP12.79□□□□□ -0.36
CD180-201ENST00000256447 MIER1Q8N108 512 aa12.76□□□□□ -0.37
CD180-201ENST00000256447 TNIKQ9UKE5 1360 aa12.76□□□□□ -0.37
CD180-201ENST00000256447 GOLGA3Q08378 1498 aa12.74□□□□□ -0.37
CD180-201ENST00000256447 MYT1Q01538 1121 aa12.73□□□□□ -0.37
CD180-201ENST00000256447 CLIP1P30622 1438 aa12.7□□□□□ -0.38
CD180-201ENST00000256447 WRNQ14191 1432 aaPredicted RBP eCLIP12.68□□□□□ -0.38
CD180-201ENST00000256447 TOP2AP11388 1531 aaKnown RBP12.68□□□□□ -0.38
CD180-201ENST00000256447 EEA1Q15075 1411 aa12.67□□□□□ -0.38
CD180-201ENST00000256447 RUSC2Q8N2Y8 1516 aa12.67□□□□□ -0.38
CD180-201ENST00000256447 BCANQ96GW7 911 aa12.62□□□□□ -0.39
CD180-201ENST00000256447 FAM50AQ14320 339 aaKnown RBP12.62□□□□□ -0.39
CD180-201ENST00000256447 CEP164Q9UPV0 1460 aa12.61□□□□□ -0.39
CD180-201ENST00000256447 SMARCA4P51532 1647 aa12.6□□□□□ -0.39
CD180-201ENST00000256447 NEFLP07196 543 aa12.59□□□□□ -0.39
CD180-201ENST00000256447 SMARCA2P51531 1590 aa12.57□□□□□ -0.4
CD180-201ENST00000256447 P3H3Q8IVL6 736 aa12.53□□□□□ -0.4
CD180-201ENST00000256447 BAZ1BQ9UIG0 1483 aaKnown RBP12.52□□□□□ -0.41
CD180-201ENST00000256447 VPS8Q8N3P4 1428 aa12.5□□□□□ -0.41
CD180-201ENST00000256447 RAPGEF2Q9Y4G8 1499 aa12.46□□□□□ -0.41
CD180-201ENST00000256447 ERICH6Q7L0X2 663 aa12.45□□□□□ -0.42
CD180-201ENST00000256447 KANK4Q5T7N3 995 aaPredicted RBP12.44□□□□□ -0.42
CD180-201ENST00000256447 DDX10Q13206 875 aaKnown RBP12.44□□□□□ -0.42
CD180-201ENST00000256447 HIRIP3Q9BW71 556 aaPredicted RBP12.42□□□□□ -0.42
CD180-201ENST00000256447 FKBP8Q14318 412 aa12.4□□□□□ -0.42
CD180-201ENST00000256447 ANP32CO43423 234 aa12.39□□□□□ -0.43
CD180-201ENST00000256447 CNGB1Q14028 1251 aaPredicted RBP12.39□□□□□ -0.43
CD180-201ENST00000256447 EIF4G1Q04637 1599 aaKnown RBP12.39□□□□□ -0.43
CD180-201ENST00000256447 SUPT16HQ9Y5B9 1047 aaKnown RBP12.38□□□□□ -0.43
CD180-201ENST00000256447 SYNJ1O43426 1573 aa12.37□□□□□ -0.43
CD180-201ENST00000256447 CLSPNQ9HAW4 1339 aa12.35□□□□□ -0.43
CD180-201ENST00000256447 TRIM52Q96A61 297 aa12.34□□□□□ -0.43
CD180-201ENST00000256447 KIF27Q86VH2 1401 aa12.34□□□□□ -0.43
CD180-201ENST00000256447 DHX57Q6P158 1386 aaKnown RBP12.33□□□□□ -0.44
CD180-201ENST00000256447 SIN3AQ96ST3 1273 aa12.33□□□□□ -0.44
CD180-201ENST00000256447 POLR3GLQ9BT43 218 aa12.33□□□□□ -0.44
CD180-201ENST00000256447 CCNB3Q8WWL7 1395 aa12.32□□□□□ -0.44
CD180-201ENST00000256447 KIF21BO75037 1637 aa12.32□□□□□ -0.44
CD180-201ENST00000256447 ATAD2BQ9ULI0 1458 aa12.32□□□□□ -0.44
CD180-201ENST00000256447 ARID3CA6NKF2 412 aa12.28□□□□□ -0.44
CD180-201ENST00000256447 KCNH8Q96L42 1107 aa12.28□□□□□ -0.44
CD180-201ENST00000256447 TONSLQ96HA7 1378 aa12.27□□□□□ -0.45
CD180-201ENST00000256447 RAB3GAP2Q9H2M9 1393 aa12.25□□□□□ -0.45
CD180-201ENST00000256447 UNC13AQ9UPW8 1703 aa12.24□□□□□ -0.45
CD180-201ENST00000256447 CUX2O14529 1486 aa12.23□□□□□ -0.45
CD180-201ENST00000256447 IRX6P78412 446 aaPredicted RBP12.23□□□□□ -0.45
CD180-201ENST00000256447 HNRNPUQ00839 825 aaKnown RBP eCLIP12.21□□□□□ -0.45
CD180-201ENST00000256447 CHIC2Q9UKJ5 165 aa12.2□□□□□ -0.46
CD180-201ENST00000256447 ARAP1Q96P48 1450 aa12.19□□□□□ -0.46
CD180-201ENST00000256447 SETD5Q9C0A6 1442 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms