RNA–Protein interactions for RNA: ENST00000533099.5

RNPC3-208, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RNPC3, Length 3,641 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-208ENST00000533099 NISCHQ9Y2I1 1504 aa15.21■□□□□ 0.03
RNPC3-208ENST00000533099 SHROOM4Q9ULL8 1493 aa14.35□□□□□ -0.11
RNPC3-208ENST00000533099 SUPT5HO00267 1087 aaKnown RBP14.3□□□□□ -0.12
RNPC3-208ENST00000533099 DCAF8L2P0C7V8 631 aa14.29□□□□□ -0.12
RNPC3-208ENST00000533099 EHMT2Q96KQ7 1210 aa13.7□□□□□ -0.22
RNPC3-208ENST00000533099 PCGF6Q9BYE7 350 aa13.68□□□□□ -0.22
RNPC3-208ENST00000533099 PPARGC1BQ86YN6 1023 aaKnown RBP13.43□□□□□ -0.26
RNPC3-208ENST00000533099 FAM9AQ8IZU1 332 aaPredicted RBP13.41□□□□□ -0.26
RNPC3-208ENST00000533099 LOC105371045A0A1W2PR82 267 aa13.37□□□□□ -0.27
RNPC3-208ENST00000533099 CHIC1Q5VXU3 224 aa13.36□□□□□ -0.27
RNPC3-208ENST00000533099 HRCP23327 699 aa13.31□□□□□ -0.28
RNPC3-208ENST00000533099 TTBK1Q5TCY1 1321 aaPredicted RBP13.23□□□□□ -0.29
RNPC3-208ENST00000533099 MYO15BQ96JP2 1530 aa13.05□□□□□ -0.32
RNPC3-208ENST00000533099 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
RNPC3-208ENST00000533099 TRIM26Q12899 539 aaPredicted RBP12.94□□□□□ -0.34
RNPC3-208ENST00000533099 CCER1Q8TC90 406 aaPredicted RBP12.83□□□□□ -0.36
RNPC3-208ENST00000533099 RANGAP1P46060 587 aaPredicted RBP12.82□□□□□ -0.36
RNPC3-208ENST00000533099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.77□□□□□ -0.36
RNPC3-208ENST00000533099 ZCCHC6Q5VYS8 1495 aaKnown RBP12.76□□□□□ -0.37
RNPC3-208ENST00000533099 YTHDC1Q96MU7 727 aaKnown RBP12.72□□□□□ -0.37
RNPC3-208ENST00000533099 ZEB1P37275 1124 aaPredicted RBP12.71□□□□□ -0.37
RNPC3-208ENST00000533099 UBTFP17480 764 aaKnown RBP12.63□□□□□ -0.39
RNPC3-208ENST00000533099 HNRNPUL2Q1KMD3 747 aaKnown RBP12.52□□□□□ -0.41
RNPC3-208ENST00000533099 DCAF1Q9Y4B6 1507 aa12.51□□□□□ -0.41
RNPC3-208ENST00000533099 CENPBP07199 599 aaPredicted RBP12.49□□□□□ -0.41
RNPC3-208ENST00000533099 SCAF1Q9H7N4 1312 aaKnown RBP12.49□□□□□ -0.41
RNPC3-208ENST00000533099 APLP2Q06481 763 aa12.47□□□□□ -0.41
RNPC3-208ENST00000533099 DIEXFQ68CQ4 756 aaKnown RBP12.47□□□□□ -0.41
RNPC3-208ENST00000533099 ABCC9O60706 1549 aa12.45□□□□□ -0.42
RNPC3-208ENST00000533099 GTF3C3Q9Y5Q9 886 aa12.43□□□□□ -0.42
RNPC3-208ENST00000533099 SCRIBQ14160 1630 aa12.4□□□□□ -0.42
RNPC3-208ENST00000533099 PELP1Q8IZL8 1130 aaKnown RBP12.38□□□□□ -0.43
RNPC3-208ENST00000533099 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
RNPC3-208ENST00000533099 ITGAEP38570 1179 aa12.35□□□□□ -0.43
RNPC3-208ENST00000533099 PABPN1Q86U42 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
RNPC3-208ENST00000533099 RSF1Q96T23 1441 aaPredicted RBP12.33□□□□□ -0.44
RNPC3-208ENST00000533099 ACIN1Q9UKV3 1341 aaKnown RBP12.32□□□□□ -0.44
RNPC3-208ENST00000533099 CCDC180Q9P1Z9 1646 aa12.29□□□□□ -0.44
RNPC3-208ENST00000533099 ATP1B4Q9UN42 357 aaPredicted RBP12.27□□□□□ -0.44
RNPC3-208ENST00000533099 CECR2Q9BXF3 1484 aa12.18□□□□□ -0.46
RNPC3-208ENST00000533099 ZNF316A6NFI3 1004 aaPredicted RBP12.17□□□□□ -0.46
RNPC3-208ENST00000533099 RB1CC1Q8TDY2 1594 aa12.16□□□□□ -0.46
RNPC3-208ENST00000533099 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
RNPC3-208ENST00000533099 MIER1Q8N108 512 aa12.12□□□□□ -0.47
RNPC3-208ENST00000533099 BCANQ96GW7 911 aa12.09□□□□□ -0.47
RNPC3-208ENST00000533099 CEP162Q5TB80 1403 aa12.01□□□□□ -0.49
RNPC3-208ENST00000533099 CNGB1Q14028 1251 aaPredicted RBP12□□□□□ -0.49
RNPC3-208ENST00000533099 SOGA1O94964 1423 aa12□□□□□ -0.49
RNPC3-208ENST00000533099 MROH2BQ7Z745 1585 aa12□□□□□ -0.49
RNPC3-208ENST00000533099 ABCC8Q09428 1581 aa11.96□□□□□ -0.5
RNPC3-208ENST00000533099 P3H3Q8IVL6 736 aa11.94□□□□□ -0.5
RNPC3-208ENST00000533099 CCDC88BA6NC98 1476 aa11.94□□□□□ -0.5
RNPC3-208ENST00000533099 FAM50AQ14320 339 aaKnown RBP11.94□□□□□ -0.5
RNPC3-208ENST00000533099 HIRIP3Q9BW71 556 aaPredicted RBP11.93□□□□□ -0.5
RNPC3-208ENST00000533099 WIZO95785 1651 aa11.88□□□□□ -0.51
RNPC3-208ENST00000533099 NEFLP07196 543 aa11.87□□□□□ -0.51
RNPC3-208ENST00000533099 RUSC2Q8N2Y8 1516 aa11.87□□□□□ -0.51
RNPC3-208ENST00000533099 CLIP1P30622 1438 aa11.84□□□□□ -0.51
RNPC3-208ENST00000533099 DDX10Q13206 875 aaKnown RBP11.83□□□□□ -0.52
RNPC3-208ENST00000533099 TNIKQ9UKE5 1360 aa11.81□□□□□ -0.52
RNPC3-208ENST00000533099 POLR3GLQ9BT43 218 aa11.81□□□□□ -0.52
RNPC3-208ENST00000533099 TRIM52Q96A61 297 aa11.79□□□□□ -0.52
RNPC3-208ENST00000533099 ARID3CA6NKF2 412 aa11.78□□□□□ -0.52
RNPC3-208ENST00000533099 FKBP8Q14318 412 aa11.77□□□□□ -0.53
RNPC3-208ENST00000533099 MYT1Q01538 1121 aa11.76□□□□□ -0.53
RNPC3-208ENST00000533099 WRNQ14191 1432 aaPredicted RBP eCLIP11.76□□□□□ -0.53
RNPC3-208ENST00000533099 ERICH6Q7L0X2 663 aa11.76□□□□□ -0.53
RNPC3-208ENST00000533099 KANK4Q5T7N3 995 aaPredicted RBP11.75□□□□□ -0.53
RNPC3-208ENST00000533099 GOLGA3Q08378 1498 aa11.74□□□□□ -0.53
RNPC3-208ENST00000533099 KCNH8Q96L42 1107 aa11.74□□□□□ -0.53
RNPC3-208ENST00000533099 IRX6P78412 446 aaPredicted RBP11.72□□□□□ -0.53
RNPC3-208ENST00000533099 SIN3AQ96ST3 1273 aa11.71□□□□□ -0.53
RNPC3-208ENST00000533099 SENP3-EIF4A1A0A087X0R7 540 aa11.7□□□□□ -0.54
RNPC3-208ENST00000533099 SUPT16HQ9Y5B9 1047 aaKnown RBP11.69□□□□□ -0.54
RNPC3-208ENST00000533099 BAZ1AQ9NRL2 1556 aaPredicted RBP11.68□□□□□ -0.54
RNPC3-208ENST00000533099 NACADO15069 1562 aa11.67□□□□□ -0.54
RNPC3-208ENST00000533099 ANP32CO43423 234 aa11.65□□□□□ -0.54
RNPC3-208ENST00000533099 CEP164Q9UPV0 1460 aa11.62□□□□□ -0.55
RNPC3-208ENST00000533099 EEA1Q15075 1411 aa11.61□□□□□ -0.55
RNPC3-208ENST00000533099 CHIC2Q9UKJ5 165 aa11.61□□□□□ -0.55
RNPC3-208ENST00000533099 ZNF326Q5BKZ1 582 aaKnown RBP11.6□□□□□ -0.55
RNPC3-208ENST00000533099 RAPGEF2Q9Y4G8 1499 aa11.6□□□□□ -0.55
RNPC3-208ENST00000533099 HNRNPUQ00839 825 aaKnown RBP eCLIP11.59□□□□□ -0.55
RNPC3-208ENST00000533099 VPS8Q8N3P4 1428 aa11.58□□□□□ -0.56
RNPC3-208ENST00000533099 FAM9BQ8IZU0 186 aa11.54□□□□□ -0.56
RNPC3-208ENST00000533099 TOP2AP11388 1531 aaKnown RBP11.53□□□□□ -0.56
RNPC3-208ENST00000533099 BAZ1BQ9UIG0 1483 aaKnown RBP11.52□□□□□ -0.56
RNPC3-208ENST00000533099 TSHZ2Q9NRE2 1034 aa11.52□□□□□ -0.57
RNPC3-208ENST00000533099 DHX57Q6P158 1386 aaKnown RBP11.52□□□□□ -0.57
RNPC3-208ENST00000533099 TONSLQ96HA7 1378 aa11.51□□□□□ -0.57
RNPC3-208ENST00000533099 RRP7BPQ9NSQ0 103 aa11.5□□□□□ -0.57
RNPC3-208ENST00000533099 CCNB3Q8WWL7 1395 aa11.5□□□□□ -0.57
RNPC3-208ENST00000533099 SMARCA2P51531 1590 aa11.49□□□□□ -0.57
RNPC3-208ENST00000533099 CDK11AQ9UQ88 783 aaPredicted RBP11.46□□□□□ -0.57
RNPC3-208ENST00000533099 RAB3GAP2Q9H2M9 1393 aa11.46□□□□□ -0.57
RNPC3-208ENST00000533099 SALL2Q9Y467 1007 aaPredicted RBP11.46□□□□□ -0.58
RNPC3-208ENST00000533099 SMARCA4P51532 1647 aa11.46□□□□□ -0.58
RNPC3-208ENST00000533099 ANP32EQ9BTT0 268 aa11.43□□□□□ -0.58
RNPC3-208ENST00000533099 KIF27Q86VH2 1401 aa11.41□□□□□ -0.58
RNPC3-208ENST00000533099 FOXD1Q16676 465 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms