RNA–Protein interactions for RNA: ENST00000389975.7

VIT-203, Transcript of vitrin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VIT, Length 2,770 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-203ENST00000389975 NISCHQ9Y2I1 1504 aa16.66■□□□□ 0.26
VIT-203ENST00000389975 SLC24A1O60721 1099 aa15.48■□□□□ 0.07
VIT-203ENST00000389975 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
VIT-203ENST00000389975 ABCC9O60706 1549 aa14.46□□□□□ -0.1
VIT-203ENST00000389975 PRKCSHP14314 528 aaPredicted RBP14.39□□□□□ -0.11
VIT-203ENST00000389975 MYT1Q01538 1121 aa14.36□□□□□ -0.11
VIT-203ENST00000389975 PELP1Q8IZL8 1130 aaKnown RBP14.28□□□□□ -0.12
VIT-203ENST00000389975 MYO15BQ96JP2 1530 aa14.26□□□□□ -0.13
VIT-203ENST00000389975 DAXXQ9UER7 740 aaPredicted RBP14.23□□□□□ -0.13
VIT-203ENST00000389975 NACADO15069 1562 aa14.21□□□□□ -0.13
VIT-203ENST00000389975 RB1CC1Q8TDY2 1594 aa14.2□□□□□ -0.14
VIT-203ENST00000389975 SHROOM4Q9ULL8 1493 aa14.19□□□□□ -0.14
VIT-203ENST00000389975 TTBK1Q5TCY1 1321 aaPredicted RBP14.15□□□□□ -0.14
VIT-203ENST00000389975 APLP2Q06481 763 aa14.08□□□□□ -0.16
VIT-203ENST00000389975 DCAF1Q9Y4B6 1507 aa14.06□□□□□ -0.16
VIT-203ENST00000389975 ERICH6Q7L0X2 663 aa13.94□□□□□ -0.18
VIT-203ENST00000389975 EHMT2Q96KQ7 1210 aa13.92□□□□□ -0.18
VIT-203ENST00000389975 SUPT5HO00267 1087 aaKnown RBP13.91□□□□□ -0.18
VIT-203ENST00000389975 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
VIT-203ENST00000389975 ZCCHC6Q5VYS8 1495 aaKnown RBP13.86□□□□□ -0.19
VIT-203ENST00000389975 UNC13AQ9UPW8 1703 aa13.79□□□□□ -0.2
VIT-203ENST00000389975 DCAF8L2P0C7V8 631 aa13.73□□□□□ -0.21
VIT-203ENST00000389975 RTN4Q9NQC3 1192 aaKnown RBP13.71□□□□□ -0.21
VIT-203ENST00000389975 BICRAQ9NZM4 1560 aa13.67□□□□□ -0.22
VIT-203ENST00000389975 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
VIT-203ENST00000389975 CHIC1Q5VXU3 224 aa13.43□□□□□ -0.26
VIT-203ENST00000389975 EIF5BO60841 1220 aaKnown RBP13.36□□□□□ -0.27
VIT-203ENST00000389975 SCRIBQ14160 1630 aa13.36□□□□□ -0.27
VIT-203ENST00000389975 DNAJC5BQ9UF47 199 aa13.33□□□□□ -0.28
VIT-203ENST00000389975 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
VIT-203ENST00000389975 EIF4G1Q04637 1599 aaKnown RBP13.31□□□□□ -0.28
VIT-203ENST00000389975 TIMELESSQ9UNS1 1208 aa13.29□□□□□ -0.28
VIT-203ENST00000389975 CC2D2AQ9P2K1 1620 aa13.26□□□□□ -0.29
VIT-203ENST00000389975 PCGF6Q9BYE7 350 aa13.2□□□□□ -0.3
VIT-203ENST00000389975 PLEKHG5O94827 1062 aa13.2□□□□□ -0.3
VIT-203ENST00000389975 LOC105371045A0A1W2PR82 267 aa13.18□□□□□ -0.3
VIT-203ENST00000389975 KLHL34Q8N239 644 aa13.16□□□□□ -0.3
VIT-203ENST00000389975 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
VIT-203ENST00000389975 ARXQ96QS3 562 aa13.15□□□□□ -0.3
VIT-203ENST00000389975 BCL11AQ9H165 835 aa13.15□□□□□ -0.31
VIT-203ENST00000389975 HRCP23327 699 aa13.13□□□□□ -0.31
VIT-203ENST00000389975 PPARGC1BQ86YN6 1023 aaKnown RBP13.07□□□□□ -0.32
VIT-203ENST00000389975 NCAPD3P42695 1498 aa13.04□□□□□ -0.32
VIT-203ENST00000389975 PEG3Q9GZU2 1588 aa13.03□□□□□ -0.32
VIT-203ENST00000389975 TULP1O00294 542 aaPredicted RBP13.03□□□□□ -0.32
VIT-203ENST00000389975 HMGXB3Q12766 1538 aa13.02□□□□□ -0.32
VIT-203ENST00000389975 SMARCA2P51531 1590 aa13.02□□□□□ -0.33
VIT-203ENST00000389975 RANGAP1P46060 587 aaPredicted RBP13□□□□□ -0.33
VIT-203ENST00000389975 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
VIT-203ENST00000389975 BAZ1AQ9NRL2 1556 aaPredicted RBP12.98□□□□□ -0.33
VIT-203ENST00000389975 KCNA4P22459 653 aa12.97□□□□□ -0.33
VIT-203ENST00000389975 SMARCA4P51532 1647 aa12.96□□□□□ -0.33
VIT-203ENST00000389975 FAM9AQ8IZU1 332 aaPredicted RBP12.93□□□□□ -0.34
VIT-203ENST00000389975 RSF1Q96T23 1441 aaPredicted RBP12.92□□□□□ -0.34
VIT-203ENST00000389975 ATAD2BQ9ULI0 1458 aa12.9□□□□□ -0.34
VIT-203ENST00000389975 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
VIT-203ENST00000389975 PODXL2Q9NZ53 605 aa12.81□□□□□ -0.36
VIT-203ENST00000389975 CUX2O14529 1486 aa12.79□□□□□ -0.36
VIT-203ENST00000389975 TRIM26Q12899 539 aaPredicted RBP12.77□□□□□ -0.36
VIT-203ENST00000389975 HOMEZQ8IX15 550 aa12.77□□□□□ -0.37
VIT-203ENST00000389975 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.37
VIT-203ENST00000389975 BAZ1BQ9UIG0 1483 aaKnown RBP12.76□□□□□ -0.37
VIT-203ENST00000389975 TAOK2Q9UL54 1235 aa12.75□□□□□ -0.37
VIT-203ENST00000389975 AEBP2Q6ZN18 517 aaPredicted RBP12.72□□□□□ -0.37
VIT-203ENST00000389975 MROH2BQ7Z745 1585 aa12.7□□□□□ -0.38
VIT-203ENST00000389975 CSRNP3Q8WYN3 585 aa12.68□□□□□ -0.38
VIT-203ENST00000389975 WIZO95785 1651 aa12.66□□□□□ -0.38
VIT-203ENST00000389975 TPRNQ4KMQ1 711 aa12.61□□□□□ -0.39
VIT-203ENST00000389975 PDS5BQ9NTI5 1447 aa12.6□□□□□ -0.39
VIT-203ENST00000389975 ERCC6Q03468 1493 aa12.57□□□□□ -0.4
VIT-203ENST00000389975 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
VIT-203ENST00000389975 THOC2Q8NI27 1593 aaKnown RBP12.57□□□□□ -0.4
VIT-203ENST00000389975 PRDM2Q13029 1718 aa12.56□□□□□ -0.4
VIT-203ENST00000389975 SCAF1Q9H7N4 1312 aaKnown RBP12.56□□□□□ -0.4
VIT-203ENST00000389975 CADPSQ9ULU8 1353 aa12.54□□□□□ -0.4
VIT-203ENST00000389975 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
VIT-203ENST00000389975 NPM2Q86SE8 214 aaKnown RBP12.49□□□□□ -0.41
VIT-203ENST00000389975 CFTRP13569 1480 aa12.48□□□□□ -0.41
VIT-203ENST00000389975 WDR62O43379 1518 aa12.48□□□□□ -0.41
VIT-203ENST00000389975 KIF21AQ7Z4S6 1674 aa12.48□□□□□ -0.41
VIT-203ENST00000389975 ABCC8Q09428 1581 aa12.46□□□□□ -0.41
VIT-203ENST00000389975 MRC2Q9UBG0 1479 aa12.45□□□□□ -0.42
VIT-203ENST00000389975 NESP48681 1621 aa12.44□□□□□ -0.42
VIT-203ENST00000389975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.42□□□□□ -0.42
VIT-203ENST00000389975 ZEB1P37275 1124 aaPredicted RBP12.41□□□□□ -0.42
VIT-203ENST00000389975 C14orf37Q86TY3 774 aa12.41□□□□□ -0.42
VIT-203ENST00000389975 GTF3C3Q9Y5Q9 886 aa12.4□□□□□ -0.42
VIT-203ENST00000389975 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.42
VIT-203ENST00000389975 PDIA4P13667 645 aaKnown RBP12.4□□□□□ -0.43
VIT-203ENST00000389975 CEP164Q9UPV0 1460 aa12.39□□□□□ -0.43
VIT-203ENST00000389975 BCANQ96GW7 911 aa12.35□□□□□ -0.43
VIT-203ENST00000389975 FANCD2Q9BXW9 1451 aa12.35□□□□□ -0.43
VIT-203ENST00000389975 SOGA1O94964 1423 aa12.34□□□□□ -0.43
VIT-203ENST00000389975 UBE2Q2Q8WVN8 375 aa12.32□□□□□ -0.44
VIT-203ENST00000389975 WDR97A6NE52 1622 aa12.31□□□□□ -0.44
VIT-203ENST00000389975 CCER1Q8TC90 406 aaPredicted RBP12.31□□□□□ -0.44
VIT-203ENST00000389975 RUSC2Q8N2Y8 1516 aa12.31□□□□□ -0.44
VIT-203ENST00000389975 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
VIT-203ENST00000389975 CEP162Q5TB80 1403 aa12.26□□□□□ -0.45
VIT-203ENST00000389975 CENPBP07199 599 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms