RNA–Protein interactions for RNA: ENST00000579781.1

LINC00683-202, long intergenic non-protein coding RNA 683, humanhuman

TSL 2 BASIC

Gene LINC00683, Length 3,510 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00683-202ENST00000579781 NISCHQ9Y2I1 1504 aa15.53■□□□□ 0.08
LINC00683-202ENST00000579781 PELP1Q8IZL8 1130 aaKnown RBP14.25□□□□□ -0.13
LINC00683-202ENST00000579781 MYT1Q01538 1121 aa13.88□□□□□ -0.19
LINC00683-202ENST00000579781 CCDC180Q9P1Z9 1646 aa13.71□□□□□ -0.21
LINC00683-202ENST00000579781 HRCP23327 699 aa13.64□□□□□ -0.23
LINC00683-202ENST00000579781 PPARGC1BQ86YN6 1023 aaKnown RBP13.62□□□□□ -0.23
LINC00683-202ENST00000579781 SCAF1Q9H7N4 1312 aaKnown RBP13.43□□□□□ -0.26
LINC00683-202ENST00000579781 PCGF6Q9BYE7 350 aa13.27□□□□□ -0.29
LINC00683-202ENST00000579781 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
LINC00683-202ENST00000579781 PRKCSHP14314 528 aaPredicted RBP13.22□□□□□ -0.29
LINC00683-202ENST00000579781 DCAF1Q9Y4B6 1507 aa13.16□□□□□ -0.3
LINC00683-202ENST00000579781 BCL11AQ9H165 835 aa13.14□□□□□ -0.31
LINC00683-202ENST00000579781 TTBK1Q5TCY1 1321 aaPredicted RBP13.14□□□□□ -0.31
LINC00683-202ENST00000579781 FAM9AQ8IZU1 332 aaPredicted RBP13.01□□□□□ -0.33
LINC00683-202ENST00000579781 GTF3C3Q9Y5Q9 886 aa12.92□□□□□ -0.34
LINC00683-202ENST00000579781 MYO15BQ96JP2 1530 aa12.91□□□□□ -0.34
LINC00683-202ENST00000579781 CENPBP07199 599 aaPredicted RBP12.86□□□□□ -0.35
LINC00683-202ENST00000579781 NEUROD1Q13562 356 aa12.83□□□□□ -0.36
LINC00683-202ENST00000579781 ACIN1Q9UKV3 1341 aaKnown RBP12.82□□□□□ -0.36
LINC00683-202ENST00000579781 ERICH6Q7L0X2 663 aa12.79□□□□□ -0.36
LINC00683-202ENST00000579781 APLP2Q06481 763 aa12.55□□□□□ -0.4
LINC00683-202ENST00000579781 ANP32EQ9BTT0 268 aa12.53□□□□□ -0.4
LINC00683-202ENST00000579781 CSRNP3Q8WYN3 585 aa12.53□□□□□ -0.4
LINC00683-202ENST00000579781 ZEB1P37275 1124 aaPredicted RBP12.51□□□□□ -0.41
LINC00683-202ENST00000579781 ABCC9O60706 1549 aa12.5□□□□□ -0.41
LINC00683-202ENST00000579781 YTHDC1Q96MU7 727 aaKnown RBP12.49□□□□□ -0.41
LINC00683-202ENST00000579781 SUPT5HO00267 1087 aaKnown RBP12.42□□□□□ -0.42
LINC00683-202ENST00000579781 NACADO15069 1562 aa12.42□□□□□ -0.42
LINC00683-202ENST00000579781 UNC13AQ9UPW8 1703 aa12.38□□□□□ -0.43
LINC00683-202ENST00000579781 TRIM26Q12899 539 aaPredicted RBP12.36□□□□□ -0.43
LINC00683-202ENST00000579781 ANO8Q9HCE9 1232 aaPredicted RBP12.33□□□□□ -0.43
LINC00683-202ENST00000579781 DIEXFQ68CQ4 756 aaKnown RBP12.28□□□□□ -0.44
LINC00683-202ENST00000579781 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
LINC00683-202ENST00000579781 EIF4G1Q04637 1599 aaKnown RBP12.23□□□□□ -0.45
LINC00683-202ENST00000579781 CCDC136Q96JN2 1154 aa12.2□□□□□ -0.46
LINC00683-202ENST00000579781 LOC105371045A0A1W2PR82 267 aa12.19□□□□□ -0.46
LINC00683-202ENST00000579781 SCRIBQ14160 1630 aa12.14□□□□□ -0.47
LINC00683-202ENST00000579781 EIF5BO60841 1220 aaKnown RBP12.14□□□□□ -0.47
LINC00683-202ENST00000579781 CHIC1Q5VXU3 224 aa12.12□□□□□ -0.47
LINC00683-202ENST00000579781 TSHZ2Q9NRE2 1034 aa12.12□□□□□ -0.47
LINC00683-202ENST00000579781 SHROOM4Q9ULL8 1493 aa12.1□□□□□ -0.47
LINC00683-202ENST00000579781 RB1CC1Q8TDY2 1594 aa12.1□□□□□ -0.47
LINC00683-202ENST00000579781 SALL2Q9Y467 1007 aaPredicted RBP12.07□□□□□ -0.48
LINC00683-202ENST00000579781 RSF1Q96T23 1441 aaPredicted RBP12.06□□□□□ -0.48
LINC00683-202ENST00000579781 PLEKHG5O94827 1062 aa12.06□□□□□ -0.48
LINC00683-202ENST00000579781 PEG3Q9GZU2 1588 aa12.05□□□□□ -0.48
LINC00683-202ENST00000579781 BAZ1AQ9NRL2 1556 aaPredicted RBP12.05□□□□□ -0.48
LINC00683-202ENST00000579781 BICRAQ9NZM4 1560 aa12.04□□□□□ -0.48
LINC00683-202ENST00000579781 CCER1Q8TC90 406 aaPredicted RBP12.02□□□□□ -0.49
LINC00683-202ENST00000579781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.02□□□□□ -0.49
LINC00683-202ENST00000579781 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.49
LINC00683-202ENST00000579781 BCANQ96GW7 911 aa11.98□□□□□ -0.49
LINC00683-202ENST00000579781 SUPT16HQ9Y5B9 1047 aaKnown RBP11.97□□□□□ -0.49
LINC00683-202ENST00000579781 MROH2BQ7Z745 1585 aa11.95□□□□□ -0.5
LINC00683-202ENST00000579781 UBE2Q2Q8WVN8 375 aa11.94□□□□□ -0.5
LINC00683-202ENST00000579781 WIZO95785 1651 aa11.93□□□□□ -0.5
LINC00683-202ENST00000579781 SMARCA4P51532 1647 aa11.93□□□□□ -0.5
LINC00683-202ENST00000579781 RTN4Q9NQC3 1192 aaKnown RBP11.91□□□□□ -0.5
LINC00683-202ENST00000579781 MIER1Q8N108 512 aa11.89□□□□□ -0.51
LINC00683-202ENST00000579781 CECR2Q9BXF3 1484 aa11.88□□□□□ -0.51
LINC00683-202ENST00000579781 DEKP35659 375 aaKnown RBP11.87□□□□□ -0.51
LINC00683-202ENST00000579781 EHMT2Q96KQ7 1210 aa11.86□□□□□ -0.51
LINC00683-202ENST00000579781 PKNOX2Q96KN3 472 aa11.85□□□□□ -0.51
LINC00683-202ENST00000579781 TOP2AP11388 1531 aaKnown RBP11.85□□□□□ -0.51
LINC00683-202ENST00000579781 PODXL2Q9NZ53 605 aa11.84□□□□□ -0.51
LINC00683-202ENST00000579781 RBM19Q9Y4C8 960 aaKnown RBP11.81□□□□□ -0.52
LINC00683-202ENST00000579781 SMARCA2P51531 1590 aa11.79□□□□□ -0.52
LINC00683-202ENST00000579781 DAXXQ9UER7 740 aaPredicted RBP11.78□□□□□ -0.52
LINC00683-202ENST00000579781 ZNF316A6NFI3 1004 aaPredicted RBP11.75□□□□□ -0.53
LINC00683-202ENST00000579781 MSH5O43196 834 aa11.74□□□□□ -0.53
LINC00683-202ENST00000579781 TRIM41Q8WV44 630 aa11.73□□□□□ -0.53
LINC00683-202ENST00000579781 NBR1Q14596 966 aa11.72□□□□□ -0.53
LINC00683-202ENST00000579781 ITGAEP38570 1179 aa11.71□□□□□ -0.54
LINC00683-202ENST00000579781 IL27Q8NEV9 243 aa11.69□□□□□ -0.54
LINC00683-202ENST00000579781 PRDM2Q13029 1718 aa11.68□□□□□ -0.54
LINC00683-202ENST00000579781 FKBP8Q14318 412 aa11.65□□□□□ -0.54
LINC00683-202ENST00000579781 ERICH6BQ5W0A0 696 aa11.62□□□□□ -0.55
LINC00683-202ENST00000579781 CLSPNQ9HAW4 1339 aa11.61□□□□□ -0.55
LINC00683-202ENST00000579781 MYT1LQ9UL68 1186 aa11.59□□□□□ -0.55
LINC00683-202ENST00000579781 CCDC88BA6NC98 1476 aa11.58□□□□□ -0.56
LINC00683-202ENST00000579781 TIMELESSQ9UNS1 1208 aa11.57□□□□□ -0.56
LINC00683-202ENST00000579781 A0A0U1RQG5 324 aaPredicted RBP11.57□□□□□ -0.56
LINC00683-202ENST00000579781 HMGXB3Q12766 1538 aa11.56□□□□□ -0.56
LINC00683-202ENST00000579781 BIVM-ERCC5R4GMW8 1640 aa11.54□□□□□ -0.56
LINC00683-202ENST00000579781 NEFLP07196 543 aa11.54□□□□□ -0.56
LINC00683-202ENST00000579781 RTL5Q5HYW3 569 aaPredicted RBP11.51□□□□□ -0.57
LINC00683-202ENST00000579781 VSIG10Q8N0Z9 540 aa11.5□□□□□ -0.57
LINC00683-202ENST00000579781 ATAD2BQ9ULI0 1458 aa11.48□□□□□ -0.57
LINC00683-202ENST00000579781 AEBP2Q6ZN18 517 aaPredicted RBP11.46□□□□□ -0.58
LINC00683-202ENST00000579781 ZMYND15Q9H091 742 aa11.44□□□□□ -0.58
LINC00683-202ENST00000579781 DCAF8L2P0C7V8 631 aa11.42□□□□□ -0.58
LINC00683-202ENST00000579781 GLIPR1L2Q4G1C9 344 aa11.42□□□□□ -0.58
LINC00683-202ENST00000579781 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
LINC00683-202ENST00000579781 KIF21BO75037 1637 aa11.41□□□□□ -0.58
LINC00683-202ENST00000579781 TOP2BQ02880 1626 aa11.41□□□□□ -0.58
LINC00683-202ENST00000579781 CDK11AQ9UQ88 783 aaPredicted RBP11.41□□□□□ -0.58
LINC00683-202ENST00000579781 NCAPD3P42695 1498 aa11.4□□□□□ -0.58
LINC00683-202ENST00000579781 FANCIQ9NVI1 1328 aa11.39□□□□□ -0.59
LINC00683-202ENST00000579781 ABCC8Q09428 1581 aa11.38□□□□□ -0.59
LINC00683-202ENST00000579781 PDE4CQ08493 712 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms