RNA–Protein interactions for RNA: ENST00000428797.7

GABRA1-203, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-203ENST00000428797 NISCHQ9Y2I1 1504 aa17.59■□□□□ 0.41
GABRA1-203ENST00000428797 DCAF8L2P0C7V8 631 aa15.93■□□□□ 0.14
GABRA1-203ENST00000428797 SUPT5HO00267 1087 aaKnown RBP15.84■□□□□ 0.13
GABRA1-203ENST00000428797 SHROOM4Q9ULL8 1493 aa15.75■□□□□ 0.11
GABRA1-203ENST00000428797 PCGF6Q9BYE7 350 aa15.06■□□□□ 0
GABRA1-203ENST00000428797 CHIC1Q5VXU3 224 aa14.95□□□□□ -0.02
GABRA1-203ENST00000428797 ZEB1P37275 1124 aaPredicted RBP14.91□□□□□ -0.02
GABRA1-203ENST00000428797 HRCP23327 699 aa14.9□□□□□ -0.02
GABRA1-203ENST00000428797 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
GABRA1-203ENST00000428797 ZCCHC6Q5VYS8 1495 aaKnown RBP14.77□□□□□ -0.05
GABRA1-203ENST00000428797 TRIM26Q12899 539 aaPredicted RBP14.74□□□□□ -0.05
GABRA1-203ENST00000428797 FAM9AQ8IZU1 332 aaPredicted RBP14.72□□□□□ -0.05
GABRA1-203ENST00000428797 CCDC180Q9P1Z9 1646 aa14.69□□□□□ -0.06
GABRA1-203ENST00000428797 EHMT2Q96KQ7 1210 aa14.69□□□□□ -0.06
GABRA1-203ENST00000428797 LOC105371045A0A1W2PR82 267 aa14.58□□□□□ -0.08
GABRA1-203ENST00000428797 PELP1Q8IZL8 1130 aaKnown RBP14.52□□□□□ -0.08
GABRA1-203ENST00000428797 APLP2Q06481 763 aa14.51□□□□□ -0.09
GABRA1-203ENST00000428797 CCER1Q8TC90 406 aaPredicted RBP14.47□□□□□ -0.09
GABRA1-203ENST00000428797 CENPBP07199 599 aaPredicted RBP14.44□□□□□ -0.1
GABRA1-203ENST00000428797 DCAF1Q9Y4B6 1507 aa14.41□□□□□ -0.1
GABRA1-203ENST00000428797 PPARGC1BQ86YN6 1023 aaKnown RBP14.36□□□□□ -0.11
GABRA1-203ENST00000428797 UBTFP17480 764 aaKnown RBP14.31□□□□□ -0.12
GABRA1-203ENST00000428797 TTBK1Q5TCY1 1321 aaPredicted RBP14.27□□□□□ -0.13
GABRA1-203ENST00000428797 MYO15BQ96JP2 1530 aa14.23□□□□□ -0.13
GABRA1-203ENST00000428797 MYT1Q01538 1121 aa14.11□□□□□ -0.15
GABRA1-203ENST00000428797 ABCC9O60706 1549 aa14.1□□□□□ -0.15
GABRA1-203ENST00000428797 SCRIBQ14160 1630 aa14.09□□□□□ -0.15
GABRA1-203ENST00000428797 RSF1Q96T23 1441 aaPredicted RBP14.04□□□□□ -0.16
GABRA1-203ENST00000428797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.04□□□□□ -0.16
GABRA1-203ENST00000428797 RANGAP1P46060 587 aaPredicted RBP14.01□□□□□ -0.17
GABRA1-203ENST00000428797 DIEXFQ68CQ4 756 aaKnown RBP14□□□□□ -0.17
GABRA1-203ENST00000428797 YTHDC1Q96MU7 727 aaKnown RBP13.92□□□□□ -0.18
GABRA1-203ENST00000428797 HNRNPUL2Q1KMD3 747 aaKnown RBP13.9□□□□□ -0.18
GABRA1-203ENST00000428797 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
GABRA1-203ENST00000428797 RB1CC1Q8TDY2 1594 aa13.9□□□□□ -0.18
GABRA1-203ENST00000428797 NACADO15069 1562 aa13.89□□□□□ -0.19
GABRA1-203ENST00000428797 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
GABRA1-203ENST00000428797 ACIN1Q9UKV3 1341 aaKnown RBP13.82□□□□□ -0.2
GABRA1-203ENST00000428797 EEA1Q15075 1411 aa13.78□□□□□ -0.2
GABRA1-203ENST00000428797 ATP1B4Q9UN42 357 aaPredicted RBP13.76□□□□□ -0.21
GABRA1-203ENST00000428797 NEFLP07196 543 aa13.76□□□□□ -0.21
GABRA1-203ENST00000428797 GTF3C3Q9Y5Q9 886 aa13.74□□□□□ -0.21
GABRA1-203ENST00000428797 PABPN1Q86U42 306 aaKnown RBP eCLIP13.74□□□□□ -0.21
GABRA1-203ENST00000428797 BAZ1AQ9NRL2 1556 aaPredicted RBP13.69□□□□□ -0.22
GABRA1-203ENST00000428797 ITGAEP38570 1179 aa13.65□□□□□ -0.22
GABRA1-203ENST00000428797 CECR2Q9BXF3 1484 aa13.65□□□□□ -0.22
GABRA1-203ENST00000428797 TNIKQ9UKE5 1360 aa13.65□□□□□ -0.22
GABRA1-203ENST00000428797 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
GABRA1-203ENST00000428797 GOLGA3Q08378 1498 aa13.61□□□□□ -0.23
GABRA1-203ENST00000428797 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
GABRA1-203ENST00000428797 CLSPNQ9HAW4 1339 aa13.59□□□□□ -0.23
GABRA1-203ENST00000428797 MROH2BQ7Z745 1585 aa13.59□□□□□ -0.23
GABRA1-203ENST00000428797 ERICH6Q7L0X2 663 aa13.56□□□□□ -0.24
GABRA1-203ENST00000428797 NEUROD1Q13562 356 aa13.55□□□□□ -0.24
GABRA1-203ENST00000428797 CLIP1P30622 1438 aa13.55□□□□□ -0.24
GABRA1-203ENST00000428797 WRNQ14191 1432 aaPredicted RBP eCLIP13.53□□□□□ -0.24
GABRA1-203ENST00000428797 CEP164Q9UPV0 1460 aa13.51□□□□□ -0.25
GABRA1-203ENST00000428797 FAM50AQ14320 339 aaKnown RBP13.48□□□□□ -0.25
GABRA1-203ENST00000428797 TOP2AP11388 1531 aaKnown RBP13.44□□□□□ -0.26
GABRA1-203ENST00000428797 CCDC88BA6NC98 1476 aa13.43□□□□□ -0.26
GABRA1-203ENST00000428797 WIZO95785 1651 aa13.43□□□□□ -0.26
GABRA1-203ENST00000428797 SOGA1O94964 1423 aa13.4□□□□□ -0.26
GABRA1-203ENST00000428797 ANP32CO43423 234 aa13.39□□□□□ -0.27
GABRA1-203ENST00000428797 BAZ1BQ9UIG0 1483 aaKnown RBP13.38□□□□□ -0.27
GABRA1-203ENST00000428797 MIER1Q8N108 512 aa13.37□□□□□ -0.27
GABRA1-203ENST00000428797 ABCC8Q09428 1581 aa13.35□□□□□ -0.27
GABRA1-203ENST00000428797 VPS8Q8N3P4 1428 aa13.32□□□□□ -0.28
GABRA1-203ENST00000428797 KIF27Q86VH2 1401 aa13.29□□□□□ -0.28
GABRA1-203ENST00000428797 SMARCA4P51532 1647 aa13.28□□□□□ -0.28
GABRA1-203ENST00000428797 TRIM52Q96A61 297 aa13.25□□□□□ -0.29
GABRA1-203ENST00000428797 SMARCA2P51531 1590 aa13.23□□□□□ -0.29
GABRA1-203ENST00000428797 P3H3Q8IVL6 736 aa13.23□□□□□ -0.29
GABRA1-203ENST00000428797 TONSLQ96HA7 1378 aa13.22□□□□□ -0.29
GABRA1-203ENST00000428797 BCANQ96GW7 911 aa13.2□□□□□ -0.3
GABRA1-203ENST00000428797 CDK11AQ9UQ88 783 aaPredicted RBP13.18□□□□□ -0.3
GABRA1-203ENST00000428797 DDX10Q13206 875 aaKnown RBP13.18□□□□□ -0.3
GABRA1-203ENST00000428797 CCNB3Q8WWL7 1395 aa13.16□□□□□ -0.3
GABRA1-203ENST00000428797 POLR3GLQ9BT43 218 aa13.15□□□□□ -0.3
GABRA1-203ENST00000428797 TIMELESSQ9UNS1 1208 aa13.14□□□□□ -0.31
GABRA1-203ENST00000428797 FKBP8Q14318 412 aa13.14□□□□□ -0.31
GABRA1-203ENST00000428797 FHAD1B1AJZ9 1412 aa13.11□□□□□ -0.31
GABRA1-203ENST00000428797 RUSC2Q8N2Y8 1516 aa13.1□□□□□ -0.31
GABRA1-203ENST00000428797 MTUS2Q5JR59 1369 aa13.1□□□□□ -0.31
GABRA1-203ENST00000428797 ATAD2BQ9ULI0 1458 aa13.09□□□□□ -0.31
GABRA1-203ENST00000428797 RAPGEF2Q9Y4G8 1499 aa13.07□□□□□ -0.32
GABRA1-203ENST00000428797 CARMIL1Q5VZK9 1371 aa13.04□□□□□ -0.32
GABRA1-203ENST00000428797 KIF21BO75037 1637 aa13.03□□□□□ -0.32
GABRA1-203ENST00000428797 SETD5Q9C0A6 1442 aa13.03□□□□□ -0.32
GABRA1-203ENST00000428797 HNRNPUQ00839 825 aaKnown RBP eCLIP13.03□□□□□ -0.32
GABRA1-203ENST00000428797 KANK4Q5T7N3 995 aaPredicted RBP13.03□□□□□ -0.32
GABRA1-203ENST00000428797 CUX2O14529 1486 aa13.02□□□□□ -0.33
GABRA1-203ENST00000428797 DAXXQ9UER7 740 aaPredicted RBP13□□□□□ -0.33
GABRA1-203ENST00000428797 SUPT16HQ9Y5B9 1047 aaKnown RBP13□□□□□ -0.33
GABRA1-203ENST00000428797 RTL5Q5HYW3 569 aaPredicted RBP12.99□□□□□ -0.33
GABRA1-203ENST00000428797 DHX57Q6P158 1386 aaKnown RBP12.99□□□□□ -0.33
GABRA1-203ENST00000428797 CNGB1Q14028 1251 aaPredicted RBP12.99□□□□□ -0.33
GABRA1-203ENST00000428797 CCER2I3L3R5 266 aa12.97□□□□□ -0.33
GABRA1-203ENST00000428797 EIF4G2P78344 907 aaKnown RBP eCLIP12.97□□□□□ -0.33
GABRA1-203ENST00000428797 RAB3GAP2Q9H2M9 1393 aa12.95□□□□□ -0.34
GABRA1-203ENST00000428797 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms