Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.993e-7■■■□□ 14.6
DROSHAQ9NRR4 MEPCE-204ENST00000497759 666 ntTSL 332.55■■■□□ 2.85e-15■■■□□ 14.6
DROSHAQ9NRR4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC31.91■■■□□ 2.73e-7■■■□□ 14.6
DROSHAQ9NRR4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC31.83■■■□□ 2.695e-6■■■□□ 14.6
DROSHAQ9NRR4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.613e-7■■■□□ 14.6
DROSHAQ9NRR4 RAD23A-208ENST00000591499 1350 ntTSL 231.31■■■□□ 2.63e-7■■■□□ 14.6
DROSHAQ9NRR4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.423e-7■■■□□ 14.6
DROSHAQ9NRR4 CAPN12-207ENST00000597716 2198 ntTSL 229.12■■■□□ 2.255e-6■■■□□ 14.6
DROSHAQ9NRR4 HMG20B-208ENST00000464304 881 ntTSL 228.72■■■□□ 2.193e-7■■■□□ 14.6
DROSHAQ9NRR4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC28.09■■■□□ 2.095e-15■■■□□ 14.6
DROSHAQ9NRR4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC28.06■■■□□ 2.083e-7■■■□□ 14.6
DROSHAQ9NRR4 HMG20B-216ENST00000585900 741 ntTSL 328.02■■■□□ 2.083e-7■■■□□ 14.6
DROSHAQ9NRR4 MTA1-214ENST00000494026 852 ntTSL 527.59■■■□□ 2.013e-7■■■□□ 14.6
DROSHAQ9NRR4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.973e-7■■■□□ 14.6
DROSHAQ9NRR4 PTBP2-209ENST00000482253 2029 ntTSL 227.3■■□□□ 1.963e-7■■■□□ 14.6
DROSHAQ9NRR4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.933e-7■■■□□ 14.6
DROSHAQ9NRR4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.915e-6■■■□□ 14.6
DROSHAQ9NRR4 DTNBP1-207ENST00000510395 1404 ntTSL 226.91■■□□□ 1.93e-7■■■□□ 14.6
DROSHAQ9NRR4 WDR27-206ENST00000474018 951 ntTSL 226.75■■□□□ 1.873e-7■■■□□ 14.6
DROSHAQ9NRR4 HMG20B-212ENST00000487894 1242 ntTSL 226.22■■□□□ 1.793e-7■■■□□ 14.6
DROSHAQ9NRR4 CTSD-214ENST00000637937 1262 ntTSL 525.97■■□□□ 1.753e-7■■■□□ 14.6
DROSHAQ9NRR4 MTA1-216ENST00000498644 871 ntTSL 225.9■■□□□ 1.743e-7■■■□□ 14.6
DROSHAQ9NRR4 DTNBP1-205ENST00000506844 1542 ntTSL 1 (best)25.44■■□□□ 1.663e-7■■■□□ 14.6
DROSHAQ9NRR4 RAD23A-210ENST00000593114 1691 ntTSL 525.34■■□□□ 1.653e-7■■■□□ 14.6
DROSHAQ9NRR4 CTSD-204ENST00000433655 2006 ntTSL 525.06■■□□□ 1.63e-7■■■□□ 14.6
DROSHAQ9NRR4 AC068580.4-204ENST00000427721 1007 ntTSL 224.82■■□□□ 1.563e-7■■■□□ 14.6
DROSHAQ9NRR4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.523e-7■■■□□ 14.6
DROSHAQ9NRR4 RAD23A-202ENST00000586375 894 ntTSL 324.25■■□□□ 1.473e-7■■■□□ 14.6
DROSHAQ9NRR4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.473e-7■■■□□ 14.6
DROSHAQ9NRR4 TRMT2A-205ENST00000444256 426 ntTSL 524.17■■□□□ 1.463e-7■■■□□ 14.6
DROSHAQ9NRR4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.465e-15■■■□□ 14.6
DROSHAQ9NRR4 MRPL40-202ENST00000443660 954 ntTSL 223.91■■□□□ 1.423e-7■■■□□ 14.6
DROSHAQ9NRR4 MEPCE-203ENST00000479201 592 ntTSL 223.85■■□□□ 1.415e-15■■■□□ 14.6
DROSHAQ9NRR4 PYCR2-202ENST00000446534 1341 ntTSL 223.46■■□□□ 1.353e-7■■■□□ 14.6
DROSHAQ9NRR4 RAD23A-207ENST00000591467 545 ntTSL 223.4■■□□□ 1.343e-7■■■□□ 14.6
DROSHAQ9NRR4 AC068580.4-202ENST00000636579 350 ntTSL 323.32■■□□□ 1.323e-7■■■□□ 14.6
DROSHAQ9NRR4 UBXN2A-203ENST00000446425 2195 ntTSL 1 (best)23.31■■□□□ 1.323e-7■■■□□ 14.6
DROSHAQ9NRR4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.313e-7■■■□□ 14.6
DROSHAQ9NRR4 TRMT2A-215ENST00000487378 654 ntTSL 223.17■■□□□ 1.33e-7■■■□□ 14.6
DROSHAQ9NRR4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.173e-7■■■□□ 14.6
DROSHAQ9NRR4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.13e-7■■■□□ 14.6
DROSHAQ9NRR4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC21.72■■□□□ 1.073e-7■■■□□ 14.6
DROSHAQ9NRR4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC21.53■■□□□ 1.046e-8■■■□□ 14.6
DROSHAQ9NRR4 PYCR2-205ENST00000472798 422 ntTSL 221.35■■□□□ 1.013e-7■■■□□ 14.6
DROSHAQ9NRR4 RAD23A-206ENST00000590881 999 ntTSL 521.1■□□□□ 0.973e-7■■■□□ 14.6
DROSHAQ9NRR4 PTBP2-205ENST00000460706 1129 ntTSL 218.25■□□□□ 0.513e-7■■■□□ 14.6
DROSHAQ9NRR4 MRPL40-203ENST00000471259 942 ntTSL 218.07■□□□□ 0.483e-7■■■□□ 14.6
DROSHAQ9NRR4 ATP5F1-203ENST00000464154 621 ntTSL 216.46■□□□□ 0.233e-7■■■□□ 14.6
DROSHAQ9NRR4 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -03e-7■■■□□ 14.6
DROSHAQ9NRR4 PYCR2-207ENST00000489681 597 ntTSL 314.89□□□□□ -0.033e-7■■■□□ 14.6
DROSHAQ9NRR4 HMG20B-210ENST00000483417 580 ntTSL 314.68□□□□□ -0.063e-7■■■□□ 14.6
DROSHAQ9NRR4 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.293e-7■■■□□ 14.6
DROSHAQ9NRR4 TMCO3-204ENST00000462877 491 ntTSL 213.19□□□□□ -0.33e-7■■■□□ 14.6
DROSHAQ9NRR4 PTBP2-207ENST00000476419 1691 ntTSL 1 (best)13.03□□□□□ -0.323e-7■■■□□ 14.6
DROSHAQ9NRR4 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.383e-7■■■□□ 14.6
DROSHAQ9NRR4 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.383e-7■■■□□ 14.6
DROSHAQ9NRR4 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.63e-7■■■□□ 14.6
DROSHAQ9NRR4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.613e-7■■■□□ 14.6
DROSHAQ9NRR4 DNM1-226ENST00000637317 100 ntTSL 53□□□□□ -1.933e-7■■■□□ 14.6
DROSHAQ9NRR4 EPS8L2-215ENST00000530093 414 ntTSL 435.52■■■■□ 3.284e-6■■■□□ 14.6
DROSHAQ9NRR4 EPS8L2-210ENST00000527807 814 ntTSL 534.51■■■■□ 3.124e-6■■■□□ 14.6
DROSHAQ9NRR4 EPS8L2-213ENST00000529346 1718 ntTSL 234.23■■■■□ 3.074e-6■■■□□ 14.6
DROSHAQ9NRR4 EPS8L2-229ENST00000534755 474 ntTSL 432.93■■■□□ 2.864e-6■■■□□ 14.6
DROSHAQ9NRR4 EPS8L2-224ENST00000533500 587 ntTSL 332.83■■■□□ 2.854e-6■■■□□ 14.6
DROSHAQ9NRR4 EPS8L2-203ENST00000524763 580 ntTSL 329.28■■■□□ 2.284e-6■■■□□ 14.6
DROSHAQ9NRR4 EPS8L2-219ENST00000531348 582 ntTSL 227.23■■□□□ 1.954e-6■■■□□ 14.6
DROSHAQ9NRR4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.244e-6■■■□□ 14.6
DROSHAQ9NRR4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.14e-6■■■□□ 14.6
DROSHAQ9NRR4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.084e-6■■■□□ 14.6
DROSHAQ9NRR4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.934e-6■■■□□ 14.6
DROSHAQ9NRR4 EPS8L2-208ENST00000526909 3844 ntTSL 517.6■□□□□ 0.414e-6■■■□□ 14.6
DROSHAQ9NRR4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC29.91■■■□□ 2.381e-7■■■□□ 14.6
DROSHAQ9NRR4 PAM16-210ENST00000575636 732 ntTSL 327.32■■□□□ 1.961e-7■■■□□ 14.6
DROSHAQ9NRR4 PAM16-205ENST00000571986 606 ntTSL 326.84■■□□□ 1.891e-7■■■□□ 14.6
DROSHAQ9NRR4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.561e-7■■■□□ 14.6
DROSHAQ9NRR4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC24.56■■□□□ 1.521e-7■■■□□ 14.6
DROSHAQ9NRR4 CORO7-PAM16-201ENST00000572274 672 ntTSL 524.54■■□□□ 1.521e-7■■■□□ 14.6
DROSHAQ9NRR4 PAM16-209ENST00000573614 650 ntTSL 523.67■■□□□ 1.381e-7■■■□□ 14.6
DROSHAQ9NRR4 PAM16-202ENST00000571178 353 ntTSL 322.66■■□□□ 1.221e-7■■■□□ 14.6
DROSHAQ9NRR4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.161e-7■■■□□ 14.6
DROSHAQ9NRR4 PAM16-213ENST00000575942 806 ntTSL 321.13■□□□□ 0.971e-7■■■□□ 14.6
DROSHAQ9NRR4 MYL5-205ENST00000505477 584 ntTSL 3 BASIC13.5□□□□□ -0.251e-7■■■□□ 14.6
DROSHAQ9NRR4 GFPT1-204ENST00000494201 625 ntTSL 511.61□□□□□ -0.551e-7■■■□□ 14.6
DROSHAQ9NRR4 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC10.93□□□□□ -0.661e-7■■■□□ 14.6
DROSHAQ9NRR4 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.961e-7■■■□□ 14.6
DROSHAQ9NRR4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC28.31■■■□□ 2.123e-6■■■□□ 14.6
DROSHAQ9NRR4 MCFD2-213ENST00000470873 552 ntTSL 427.37■■□□□ 1.973e-6■■■□□ 14.6
DROSHAQ9NRR4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.953e-6■■■□□ 14.6
DROSHAQ9NRR4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.83e-6■■■□□ 14.6
DROSHAQ9NRR4 MCFD2-214ENST00000477791 665 ntTSL 225.73■■□□□ 1.713e-6■■■□□ 14.6
DROSHAQ9NRR4 MCFD2-217ENST00000493804 807 ntTSL 224.62■■□□□ 1.533e-6■■■□□ 14.6
DROSHAQ9NRR4 MCFD2-216ENST00000487121 627 ntTSL 323.09■■□□□ 1.293e-6■■■□□ 14.6
DROSHAQ9NRR4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.263e-6■■■□□ 14.6
DROSHAQ9NRR4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.083e-6■■■□□ 14.6
DROSHAQ9NRR4 MCFD2-215ENST00000479225 568 ntTSL 320.11■□□□□ 0.813e-6■■■□□ 14.6
DROSHAQ9NRR4 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC17.37■□□□□ 0.373e-6■■■□□ 14.6
DROSHAQ9NRR4 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC14.47□□□□□ -0.093e-6■■■□□ 14.6
DROSHAQ9NRR4 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.933e-6■■■□□ 14.6
DROSHAQ9NRR4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.91□□□□□ -0.983e-6■■■□□ 14.6
DROSHAQ9NRR4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC34.84■■■■□ 3.171e-6■■■□□ 14.6
Retrieved 100 of 16,331 protein–RNA pairs in 130.1 ms