RNA–Protein interactions for RNA: ENST00000487121.1

MCFD2-216, Transcript of multiple coagulation factor deficiency 2, humanhuman

TSL 3

Gene MCFD2, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCFD2-216ENST00000487121 NISCHQ9Y2I1 1504 aa36.39■■■■□ 3.42
MCFD2-216ENST00000487121 CCDC180Q9P1Z9 1646 aa32.24■■■□□ 2.75
MCFD2-216ENST00000487121 ABCC9O60706 1549 aa31.95■■■□□ 2.7
MCFD2-216ENST00000487121 DCAF8L2P0C7V8 631 aa30.73■■■□□ 2.51
MCFD2-216ENST00000487121 RB1CC1Q8TDY2 1594 aa30.51■■■□□ 2.47
MCFD2-216ENST00000487121 NACADO15069 1562 aa30.44■■■□□ 2.46
MCFD2-216ENST00000487121 ZCCHC6Q5VYS8 1495 aaKnown RBP30.25■■■□□ 2.43
MCFD2-216ENST00000487121 MYO15BQ96JP2 1530 aa30.17■■■□□ 2.42
MCFD2-216ENST00000487121 DCAF1Q9Y4B6 1507 aa30.03■■■□□ 2.4
MCFD2-216ENST00000487121 PABPN1Q86U42 306 aaKnown RBP eCLIP29.95■■■□□ 2.39
MCFD2-216ENST00000487121 UNC13AQ9UPW8 1703 aa29.74■■■□□ 2.35
MCFD2-216ENST00000487121 BICRAQ9NZM4 1560 aa29.64■■■□□ 2.33
MCFD2-216ENST00000487121 DNAJC5BQ9UF47 199 aa29.58■■■□□ 2.33
MCFD2-216ENST00000487121 SCRIBQ14160 1630 aa29.57■■■□□ 2.32
MCFD2-216ENST00000487121 SHROOM4Q9ULL8 1493 aa29.17■■■□□ 2.26
MCFD2-216ENST00000487121 EIF4G1Q04637 1599 aaKnown RBP28.86■■■□□ 2.21
MCFD2-216ENST00000487121 CC2D2AQ9P2K1 1620 aa28.79■■■□□ 2.2
MCFD2-216ENST00000487121 CECR2Q9BXF3 1484 aa28.68■■■□□ 2.18
MCFD2-216ENST00000487121 SMARCA4P51532 1647 aa28.21■■■□□ 2.11
MCFD2-216ENST00000487121 ATAD2BQ9ULI0 1458 aa28.18■■■□□ 2.1
MCFD2-216ENST00000487121 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
MCFD2-216ENST00000487121 NCAPD3P42695 1498 aa28.16■■■□□ 2.1
MCFD2-216ENST00000487121 MROH2BQ7Z745 1585 aa28.09■■■□□ 2.09
MCFD2-216ENST00000487121 SMARCA2P51531 1590 aa28.05■■■□□ 2.08
MCFD2-216ENST00000487121 BAZ1BQ9UIG0 1483 aaKnown RBP27.92■■■□□ 2.06
MCFD2-216ENST00000487121 HMGXB3Q12766 1538 aa27.92■■■□□ 2.06
MCFD2-216ENST00000487121 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
MCFD2-216ENST00000487121 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
MCFD2-216ENST00000487121 WIZO95785 1651 aa27.74■■■□□ 2.03
MCFD2-216ENST00000487121 NESP48681 1621 aa27.6■■■□□ 2.01
MCFD2-216ENST00000487121 ERCC6Q03468 1493 aa27.51■■□□□ 1.99
MCFD2-216ENST00000487121 TOP2AP11388 1531 aaKnown RBP27.39■■□□□ 1.98
MCFD2-216ENST00000487121 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
MCFD2-216ENST00000487121 LAMC3Q9Y6N6 1575 aa27.36■■□□□ 1.97
MCFD2-216ENST00000487121 PDS5BQ9NTI5 1447 aa27.27■■□□□ 1.96
MCFD2-216ENST00000487121 CUX2O14529 1486 aa27.19■■□□□ 1.94
MCFD2-216ENST00000487121 CCDC88BA6NC98 1476 aa27.18■■□□□ 1.94
MCFD2-216ENST00000487121 CFTRP13569 1480 aa27.14■■□□□ 1.94
MCFD2-216ENST00000487121 KIF21AQ7Z4S6 1674 aa27.12■■□□□ 1.93
MCFD2-216ENST00000487121 SUPT5HO00267 1087 aaKnown RBP27.1■■□□□ 1.93
MCFD2-216ENST00000487121 THOC2Q8NI27 1593 aaKnown RBP27.06■■□□□ 1.92
MCFD2-216ENST00000487121 FANCD2Q9BXW9 1451 aa27.05■■□□□ 1.92
MCFD2-216ENST00000487121 MRC2Q9UBG0 1479 aa26.99■■□□□ 1.91
MCFD2-216ENST00000487121 CEP164Q9UPV0 1460 aa26.99■■□□□ 1.91
MCFD2-216ENST00000487121 WDR62O43379 1518 aa26.85■■□□□ 1.89
MCFD2-216ENST00000487121 URB2Q14146 1524 aaKnown RBP26.79■■□□□ 1.88
MCFD2-216ENST00000487121 PRDM2Q13029 1718 aa26.78■■□□□ 1.88
MCFD2-216ENST00000487121 DNAJC5Q9H3Z4 198 aa26.68■■□□□ 1.86
MCFD2-216ENST00000487121 TOPBP1Q92547 1522 aa26.58■■□□□ 1.85
MCFD2-216ENST00000487121 ABCC8Q09428 1581 aa26.51■■□□□ 1.83
MCFD2-216ENST00000487121 DNMBPQ6XZF7 1577 aa26.48■■□□□ 1.83
MCFD2-216ENST00000487121 IFT140Q96RY7 1462 aa26.43■■□□□ 1.82
MCFD2-216ENST00000487121 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.82
MCFD2-216ENST00000487121 POLA1P09884 1462 aaPredicted RBP26.35■■□□□ 1.81
MCFD2-216ENST00000487121 CUX1P39880 1505 aa26.34■■□□□ 1.81
MCFD2-216ENST00000487121 RAD54L2Q9Y4B4 1467 aa26.32■■□□□ 1.8
MCFD2-216ENST00000487121 SOGA1O94964 1423 aa26.31■■□□□ 1.8
MCFD2-216ENST00000487121 FGD5Q6ZNL6 1462 aa26.28■■□□□ 1.8
MCFD2-216ENST00000487121 AQRO60306 1485 aaKnown RBP eCLIP26.27■■□□□ 1.82e-6■■■■□ 23.2
MCFD2-216ENST00000487121 TARBP1Q13395 1621 aaKnown RBP26.25■■□□□ 1.79
MCFD2-216ENST00000487121 TDRD9Q8NDG6 1382 aaKnown RBP26.22■■□□□ 1.79
MCFD2-216ENST00000487121 OSCARQ8IYS5 282 aa26.19■■□□□ 1.78
MCFD2-216ENST00000487121 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
MCFD2-216ENST00000487121 WRNQ14191 1432 aaPredicted RBP eCLIP26.14■■□□□ 1.77
MCFD2-216ENST00000487121 FBLN2P98095 1184 aa26.06■■□□□ 1.76
MCFD2-216ENST00000487121 SYNJ1O43426 1573 aa26.04■■□□□ 1.76
MCFD2-216ENST00000487121 TOP2BQ02880 1626 aa26■■□□□ 1.75
MCFD2-216ENST00000487121 BIVM-ERCC5R4GMW8 1640 aa25.99■■□□□ 1.75
MCFD2-216ENST00000487121 ABCA10Q8WWZ4 1543 aa25.98■■□□□ 1.75
MCFD2-216ENST00000487121 GRIN2BQ13224 1484 aa25.95■■□□□ 1.74
MCFD2-216ENST00000487121 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.74
MCFD2-216ENST00000487121 SNAPC4Q5SXM2 1469 aa25.95■■□□□ 1.74
MCFD2-216ENST00000487121 WDR97A6NE52 1622 aa25.92■■□□□ 1.74
MCFD2-216ENST00000487121 CHMP7Q8WUX9 453 aaPredicted RBP25.91■■□□□ 1.74
MCFD2-216ENST00000487121 MAGI1Q96QZ7 1491 aaPredicted RBP25.85■■□□□ 1.73
MCFD2-216ENST00000487121 CHD1O14646 1710 aa25.83■■□□□ 1.73
MCFD2-216ENST00000487121 TRIM41Q8WV44 630 aa25.83■■□□□ 1.73
MCFD2-216ENST00000487121 ABCA5Q8WWZ7 1642 aa25.82■■□□□ 1.72
MCFD2-216ENST00000487121 SYNJ2O15056 1496 aa25.79■■□□□ 1.72
MCFD2-216ENST00000487121 PBRM1Q86U86 1689 aa25.77■■□□□ 1.72
MCFD2-216ENST00000487121 ARHGEF11O15085 1522 aa25.66■■□□□ 1.7
MCFD2-216ENST00000487121 RIMBP3CA6NJZ7 1639 aa25.65■■□□□ 1.7
MCFD2-216ENST00000487121 RIMBP3BA6NNM3 1639 aa25.65■■□□□ 1.7
MCFD2-216ENST00000487121 RIMBP3Q9UFD9 1639 aa25.65■■□□□ 1.7
MCFD2-216ENST00000487121 FHAD1B1AJZ9 1412 aa25.63■■□□□ 1.69
MCFD2-216ENST00000487121 ERICH3Q5RHP9 1530 aa25.63■■□□□ 1.69
MCFD2-216ENST00000487121 ADAMTS12P58397 1594 aa25.61■■□□□ 1.69
MCFD2-216ENST00000487121 GRIN2AQ12879 1464 aa25.6■■□□□ 1.69
MCFD2-216ENST00000487121 CYB5RLQ6IPT4 315 aa25.6■■□□□ 1.69
MCFD2-216ENST00000487121 CLASP1Q7Z460 1538 aa25.59■■□□□ 1.69
MCFD2-216ENST00000487121 KIF27Q86VH2 1401 aa25.59■■□□□ 1.69
MCFD2-216ENST00000487121 IGF1RP08069 1367 aa25.58■■□□□ 1.69
MCFD2-216ENST00000487121 NUP160Q12769 1436 aa25.49■■□□□ 1.67
MCFD2-216ENST00000487121 CEP170Q5SW79 1584 aa25.48■■□□□ 1.67
MCFD2-216ENST00000487121 ARAP1Q96P48 1450 aa25.47■■□□□ 1.67
MCFD2-216ENST00000487121 RUSC2Q8N2Y8 1516 aa25.42■■□□□ 1.66
MCFD2-216ENST00000487121 CARMIL1Q5VZK9 1371 aa25.41■■□□□ 1.66
MCFD2-216ENST00000487121 JPH4Q96JJ6 628 aa25.36■■□□□ 1.65
MCFD2-216ENST00000487121 CUL7Q14999 1698 aa25.35■■□□□ 1.65
MCFD2-216ENST00000487121 ERCC6L2Q5T890 1561 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms