RNA–Protein interactions for RNA: ENST00000446425.2

UBXN2A-203, Transcript of UBX domain protein 2A, humanhuman

TSL 1 (best)

Gene UBXN2A, Length 2,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-203ENST00000446425 NISCHQ9Y2I1 1504 aa32.31■■■□□ 2.76
UBXN2A-203ENST00000446425 HRCP23327 699 aa28.58■■■□□ 2.17
UBXN2A-203ENST00000446425 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
UBXN2A-203ENST00000446425 SUPT5HO00267 1087 aaKnown RBP28.09■■■□□ 2.09
UBXN2A-203ENST00000446425 MYO15BQ96JP2 1530 aa27.92■■■□□ 2.06
UBXN2A-203ENST00000446425 PCGF6Q9BYE7 350 aa27.87■■■□□ 2.05
UBXN2A-203ENST00000446425 CHIC1Q5VXU3 224 aa27.8■■■□□ 2.04
UBXN2A-203ENST00000446425 PPARGC1BQ86YN6 1023 aaKnown RBP27.75■■■□□ 2.03
UBXN2A-203ENST00000446425 PELP1Q8IZL8 1130 aaKnown RBP27.63■■■□□ 2.01
UBXN2A-203ENST00000446425 DCAF1Q9Y4B6 1507 aa27.54■■■□□ 2
UBXN2A-203ENST00000446425 ZCCHC6Q5VYS8 1495 aaKnown RBP27.5■■□□□ 1.99
UBXN2A-203ENST00000446425 CCDC180Q9P1Z9 1646 aa27.2■■□□□ 1.95
UBXN2A-203ENST00000446425 TRIM26Q12899 539 aaPredicted RBP27.18■■□□□ 1.94
UBXN2A-203ENST00000446425 ZEB1P37275 1124 aaPredicted RBP27.05■■□□□ 1.92
UBXN2A-203ENST00000446425 LOC105371045A0A1W2PR82 267 aa27.01■■□□□ 1.91
UBXN2A-203ENST00000446425 SCAF1Q9H7N4 1312 aaKnown RBP26.9■■□□□ 1.9
UBXN2A-203ENST00000446425 MYT1Q01538 1121 aa26.6■■□□□ 1.85
UBXN2A-203ENST00000446425 DCAF8L2P0C7V8 631 aa26.5■■□□□ 1.83
UBXN2A-203ENST00000446425 ACIN1Q9UKV3 1341 aaKnown RBP26.35■■□□□ 1.81
UBXN2A-203ENST00000446425 NEUROD1Q13562 356 aa26.19■■□□□ 1.78
UBXN2A-203ENST00000446425 ABCC9O60706 1549 aa26.13■■□□□ 1.77
UBXN2A-203ENST00000446425 TRIM41Q8WV44 630 aa26.12■■□□□ 1.77
UBXN2A-203ENST00000446425 CENPBP07199 599 aaPredicted RBP26.06■■□□□ 1.76
UBXN2A-203ENST00000446425 GTF3C3Q9Y5Q9 886 aa26.04■■□□□ 1.76
UBXN2A-203ENST00000446425 RSF1Q96T23 1441 aaPredicted RBP25.92■■□□□ 1.74
UBXN2A-203ENST00000446425 FAM9AQ8IZU1 332 aaPredicted RBP25.91■■□□□ 1.74
UBXN2A-203ENST00000446425 DIEXFQ68CQ4 756 aaKnown RBP25.9■■□□□ 1.74
UBXN2A-203ENST00000446425 CCER1Q8TC90 406 aaPredicted RBP25.86■■□□□ 1.73
UBXN2A-203ENST00000446425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.83■■□□□ 1.73
UBXN2A-203ENST00000446425 RB1CC1Q8TDY2 1594 aa25.82■■□□□ 1.72
UBXN2A-203ENST00000446425 EHMT2Q96KQ7 1210 aa25.63■■□□□ 1.69
UBXN2A-203ENST00000446425 ZNF316A6NFI3 1004 aaPredicted RBP25.49■■□□□ 1.67
UBXN2A-203ENST00000446425 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
UBXN2A-203ENST00000446425 WRNQ14191 1432 aaPredicted RBP eCLIP25.42■■□□□ 1.66
UBXN2A-203ENST00000446425 YTHDC1Q96MU7 727 aaKnown RBP25.28■■□□□ 1.64
UBXN2A-203ENST00000446425 MIER1Q8N108 512 aa25.21■■□□□ 1.63
UBXN2A-203ENST00000446425 EIF4G1Q04637 1599 aaKnown RBP25.16■■□□□ 1.62
UBXN2A-203ENST00000446425 MROH2BQ7Z745 1585 aa25.16■■□□□ 1.62
UBXN2A-203ENST00000446425 CEP162Q5TB80 1403 aa25.13■■□□□ 1.61
UBXN2A-203ENST00000446425 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
UBXN2A-203ENST00000446425 WIZO95785 1651 aa25.09■■□□□ 1.61
UBXN2A-203ENST00000446425 CLSPNQ9HAW4 1339 aa25.08■■□□□ 1.61
UBXN2A-203ENST00000446425 TTBK1Q5TCY1 1321 aaPredicted RBP25.07■■□□□ 1.6
UBXN2A-203ENST00000446425 TNIKQ9UKE5 1360 aa25.06■■□□□ 1.6
UBXN2A-203ENST00000446425 BAZ1AQ9NRL2 1556 aaPredicted RBP25.01■■□□□ 1.59
UBXN2A-203ENST00000446425 CCDC88BA6NC98 1476 aa24.91■■□□□ 1.58
UBXN2A-203ENST00000446425 EEA1Q15075 1411 aa24.88■■□□□ 1.57
UBXN2A-203ENST00000446425 SUPT16HQ9Y5B9 1047 aaKnown RBP24.86■■□□□ 1.57
UBXN2A-203ENST00000446425 ABCC8Q09428 1581 aa24.84■■□□□ 1.57
UBXN2A-203ENST00000446425 ANP32EQ9BTT0 268 aa24.81■■□□□ 1.56
UBXN2A-203ENST00000446425 SOGA1O94964 1423 aa24.8■■□□□ 1.56
UBXN2A-203ENST00000446425 NACADO15069 1562 aa24.79■■□□□ 1.56
UBXN2A-203ENST00000446425 CSRNP3Q8WYN3 585 aa24.78■■□□□ 1.56
UBXN2A-203ENST00000446425 UBTFP17480 764 aaKnown RBP24.74■■□□□ 1.55
UBXN2A-203ENST00000446425 HNRNPUL2Q1KMD3 747 aaKnown RBP24.74■■□□□ 1.55
UBXN2A-203ENST00000446425 TSHZ2Q9NRE2 1034 aa24.74■■□□□ 1.55
UBXN2A-203ENST00000446425 GOLGA3Q08378 1498 aa24.73■■□□□ 1.55
UBXN2A-203ENST00000446425 TOP2AP11388 1531 aaKnown RBP24.69■■□□□ 1.54
UBXN2A-203ENST00000446425 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
UBXN2A-203ENST00000446425 BCL11AQ9H165 835 aa24.61■■□□□ 1.53
UBXN2A-203ENST00000446425 SMARCA2P51531 1590 aa24.6■■□□□ 1.53
UBXN2A-203ENST00000446425 VPS8Q8N3P4 1428 aa24.5■■□□□ 1.51
UBXN2A-203ENST00000446425 CEP164Q9UPV0 1460 aa24.49■■□□□ 1.51
UBXN2A-203ENST00000446425 KIF21BO75037 1637 aa24.49■■□□□ 1.51
UBXN2A-203ENST00000446425 CLIP1P30622 1438 aa24.47■■□□□ 1.51
UBXN2A-203ENST00000446425 DHX57Q6P158 1386 aaKnown RBP24.43■■□□□ 1.5
UBXN2A-203ENST00000446425 APLP2Q06481 763 aa24.43■■□□□ 1.5
UBXN2A-203ENST00000446425 SMARCA4P51532 1647 aa24.41■■□□□ 1.5
UBXN2A-203ENST00000446425 BAZ1BQ9UIG0 1483 aaKnown RBP24.36■■□□□ 1.49
UBXN2A-203ENST00000446425 FKBP8Q14318 412 aa24.18■■□□□ 1.46
UBXN2A-203ENST00000446425 SYNJ1O43426 1573 aa24.17■■□□□ 1.46
UBXN2A-203ENST00000446425 RBM19Q9Y4C8 960 aaKnown RBP24.16■■□□□ 1.46
UBXN2A-203ENST00000446425 BCANQ96GW7 911 aa24.15■■□□□ 1.46
UBXN2A-203ENST00000446425 RAPGEF2Q9Y4G8 1499 aa24.15■■□□□ 1.46
UBXN2A-203ENST00000446425 CUX2O14529 1486 aa24.14■■□□□ 1.45
UBXN2A-203ENST00000446425 KCNH8Q96L42 1107 aa24.14■■□□□ 1.45
UBXN2A-203ENST00000446425 RRBP1Q9P2E9 1410 aaKnown RBP24.09■■□□□ 1.45
UBXN2A-203ENST00000446425 NEFLP07196 543 aa24.05■■□□□ 1.44
UBXN2A-203ENST00000446425 ARAP1Q96P48 1450 aa23.97■■□□□ 1.43
UBXN2A-203ENST00000446425 KANK4Q5T7N3 995 aaPredicted RBP23.96■■□□□ 1.43
UBXN2A-203ENST00000446425 RANGAP1P46060 587 aaPredicted RBP23.95■■□□□ 1.42
UBXN2A-203ENST00000446425 ERICH3Q5RHP9 1530 aa23.93■■□□□ 1.42
UBXN2A-203ENST00000446425 CCNB3Q8WWL7 1395 aa23.91■■□□□ 1.42
UBXN2A-203ENST00000446425 PEG3Q9GZU2 1588 aa23.9■■□□□ 1.42
UBXN2A-203ENST00000446425 CCER2I3L3R5 266 aa23.9■■□□□ 1.42
UBXN2A-203ENST00000446425 MSH5O43196 834 aa23.9■■□□□ 1.42
UBXN2A-203ENST00000446425 MAPKBP1O60336 1514 aa23.89■■□□□ 1.42
UBXN2A-203ENST00000446425 UNC13AQ9UPW8 1703 aa23.88■■□□□ 1.41
UBXN2A-203ENST00000446425 DDX10Q13206 875 aaKnown RBP23.88■■□□□ 1.41
UBXN2A-203ENST00000446425 FANCIQ9NVI1 1328 aa23.88■■□□□ 1.41
UBXN2A-203ENST00000446425 PPP1R15AO75807 674 aaPredicted RBP23.86■■□□□ 1.41
UBXN2A-203ENST00000446425 PRXQ9BXM0 1461 aa23.83■■□□□ 1.4
UBXN2A-203ENST00000446425 ITGAEP38570 1179 aa23.82■■□□□ 1.4
UBXN2A-203ENST00000446425 RAB3GAP2Q9H2M9 1393 aa23.82■■□□□ 1.4
UBXN2A-203ENST00000446425 TOP2BQ02880 1626 aa23.81■■□□□ 1.4
UBXN2A-203ENST00000446425 WDR97A6NE52 1622 aa23.8■■□□□ 1.4
UBXN2A-203ENST00000446425 MYT1LQ9UL68 1186 aa23.76■■□□□ 1.39
UBXN2A-203ENST00000446425 TIMELESSQ9UNS1 1208 aa23.76■■□□□ 1.39
UBXN2A-203ENST00000446425 ANP32CO43423 234 aa23.75■■□□□ 1.39
UBXN2A-203ENST00000446425 TRIM52Q96A61 297 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms