Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLK4Q9HAZ1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLK4Q9HAZ1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLK4Q9HAZ1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.51■□□□□ 0.55
CLK4Q9HAZ1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLK4Q9HAZ1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLK4Q9HAZ1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLK4Q9HAZ1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLK4Q9HAZ1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLK4Q9HAZ1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.51■□□□□ 0.55
CLK4Q9HAZ1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLK4Q9HAZ1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLK4Q9HAZ1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLK4Q9HAZ1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CLK4Q9HAZ1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 KRT8P8-201ENST00000434750 1448 ntBASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLK4Q9HAZ1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 MIR718-201ENST00000390190 70 ntBASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 AC012618.2-201ENST00000428058 849 ntBASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 C1QL1P1-201ENST00000568105 661 ntBASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLK4Q9HAZ1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms