Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.29■□□□□ 0.04
RITA1Q96K30 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.29■□□□□ 0.04
RITA1Q96K30 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.29■□□□□ 0.04
RITA1Q96K30 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RITA1Q96K30 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.29■□□□□ 0.04
RITA1Q96K30 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.29■□□□□ 0.04
RITA1Q96K30 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.29■□□□□ 0.04
RITA1Q96K30 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.29■□□□□ 0.04
RITA1Q96K30 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.29■□□□□ 0.04
RITA1Q96K30 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RITA1Q96K30 AC008550.1-201ENST00000511500 884 ntBASIC15.29■□□□□ 0.04
RITA1Q96K30 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.29■□□□□ 0.04
RITA1Q96K30 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.29■□□□□ 0.04
RITA1Q96K30 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RITA1Q96K30 AC011298.2-201ENST00000617989 482 ntBASIC15.29■□□□□ 0.04
RITA1Q96K30 AL049637.2-201ENST00000641778 930 ntBASIC15.29■□□□□ 0.04
RITA1Q96K30 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RITA1Q96K30 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.29■□□□□ 0.04
RITA1Q96K30 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RITA1Q96K30 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RITA1Q96K30 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RITA1Q96K30 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RITA1Q96K30 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.29■□□□□ 0.04
RITA1Q96K30 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RITA1Q96K30 CROCCP3-202ENST00000420820 1947 ntBASIC15.29■□□□□ 0.04
RITA1Q96K30 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RITA1Q96K30 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RITA1Q96K30 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RITA1Q96K30 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RITA1Q96K30 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RITA1Q96K30 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RITA1Q96K30 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RITA1Q96K30 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RITA1Q96K30 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.28■□□□□ 0.04
RITA1Q96K30 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RITA1Q96K30 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
RITA1Q96K30 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RITA1Q96K30 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RITA1Q96K30 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.28■□□□□ 0.04
RITA1Q96K30 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.28■□□□□ 0.04
RITA1Q96K30 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RITA1Q96K30 AC004951.3-201ENST00000418645 1148 ntBASIC15.28■□□□□ 0.04
RITA1Q96K30 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RITA1Q96K30 B3GAT3P1-201ENST00000471720 806 ntBASIC15.28■□□□□ 0.04
RITA1Q96K30 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RITA1Q96K30 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.28■□□□□ 0.04
RITA1Q96K30 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.28■□□□□ 0.04
RITA1Q96K30 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.28■□□□□ 0.04
RITA1Q96K30 MIR6786-201ENST00000616843 113 ntBASIC15.28■□□□□ 0.04
RITA1Q96K30 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RITA1Q96K30 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.28■□□□□ 0.04
RITA1Q96K30 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RITA1Q96K30 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RITA1Q96K30 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RITA1Q96K30 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
RITA1Q96K30 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RITA1Q96K30 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RITA1Q96K30 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
RITA1Q96K30 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RITA1Q96K30 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.27■□□□□ 0.04
RITA1Q96K30 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RITA1Q96K30 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RITA1Q96K30 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RITA1Q96K30 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RITA1Q96K30 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RITA1Q96K30 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.27■□□□□ 0.04
RITA1Q96K30 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.27■□□□□ 0.04
RITA1Q96K30 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RITA1Q96K30 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RITA1Q96K30 AC012618.2-201ENST00000428058 849 ntBASIC15.27■□□□□ 0.04
RITA1Q96K30 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
RITA1Q96K30 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.27■□□□□ 0.04
RITA1Q96K30 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.27■□□□□ 0.04
RITA1Q96K30 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.27■□□□□ 0.04
RITA1Q96K30 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RITA1Q96K30 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RITA1Q96K30 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RITA1Q96K30 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RITA1Q96K30 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RITA1Q96K30 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RITA1Q96K30 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RITA1Q96K30 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RITA1Q96K30 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RITA1Q96K30 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.03
RITA1Q96K30 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RITA1Q96K30 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.26■□□□□ 0.03
RITA1Q96K30 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RITA1Q96K30 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RITA1Q96K30 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.26■□□□□ 0.03
RITA1Q96K30 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RITA1Q96K30 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.26■□□□□ 0.03
RITA1Q96K30 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RITA1Q96K30 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RITA1Q96K30 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.26■□□□□ 0.03
RITA1Q96K30 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RITA1Q96K30 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RITA1Q96K30 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
RITA1Q96K30 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
RITA1Q96K30 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.26■□□□□ 0.03
RITA1Q96K30 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms