Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.652e-6■■□□□ 12.6
SND1Q7KZF4 GPAA1-205ENST00000525308 903 ntTSL 218.86■□□□□ 0.615e-8■■□□□ 12.6
SND1Q7KZF4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.582e-6■■□□□ 12.6
SND1Q7KZF4 DBI-205ENST00000460901 774 ntTSL 1 (best)18.12■□□□□ 0.492e-8■■□□□ 12.6
SND1Q7KZF4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.94■□□□□ 0.462e-8■■□□□ 12.6
SND1Q7KZF4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.71■□□□□ 0.272e-8■■□□□ 12.6
SND1Q7KZF4 GPAA1-203ENST00000524418 825 ntTSL 316.59■□□□□ 0.255e-8■■□□□ 12.6
SND1Q7KZF4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.23■□□□□ 0.192e-8■■□□□ 12.6
SND1Q7KZF4 BUD23-213ENST00000463307 1815 ntTSL 1 (best)16.21■□□□□ 0.192e-8■■□□□ 12.6
SND1Q7KZF4 BUD23-209ENST00000436944 2496 ntTSL 215.91■□□□□ 0.142e-8■■□□□ 12.6
SND1Q7KZF4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.082e-8■■□□□ 12.6
SND1Q7KZF4 GPAA1-208ENST00000527144 767 ntTSL 314.53□□□□□ -0.085e-8■■□□□ 12.6
SND1Q7KZF4 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC14.01□□□□□ -0.172e-8■■□□□ 12.6
SND1Q7KZF4 BUD23-207ENST00000430446 738 ntTSL 313.31□□□□□ -0.282e-8■■□□□ 12.6
SND1Q7KZF4 BUD23-211ENST00000442099 691 ntTSL 313.13□□□□□ -0.312e-8■■□□□ 12.6
SND1Q7KZF4 BUD23-212ENST00000453316 452 ntTSL 312.96□□□□□ -0.332e-8■■□□□ 12.6
SND1Q7KZF4 DBI-204ENST00000409094 576 ntTSL 1 (best) BASIC12.16□□□□□ -0.462e-8■■□□□ 12.6
SND1Q7KZF4 DBI-202ENST00000355857 637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.482e-8■■□□□ 12.6
SND1Q7KZF4 DBI-209ENST00000535757 740 ntTSL 1 (best) BASIC11.81□□□□□ -0.522e-8■■□□□ 12.6
SND1Q7KZF4 DBI-206ENST00000475783 842 ntTSL 1 (best)11.14□□□□□ -0.632e-8■■□□□ 12.6
SND1Q7KZF4 BUD23-215ENST00000471215 3886 ntTSL 210.93□□□□□ -0.662e-8■■□□□ 12.6
SND1Q7KZF4 DBI-208ENST00000535617 654 ntTSL 1 (best) BASIC10.51□□□□□ -0.732e-8■■□□□ 12.6
SND1Q7KZF4 SMPD1-209ENST00000533196 425 ntTSL 324.18■■□□□ 1.466e-6■■□□□ 12.6
SND1Q7KZF4 SMPD1-204ENST00000530395 447 ntTSL 521.54■■□□□ 1.046e-6■■□□□ 12.6
SND1Q7KZF4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.02■□□□□ 0.86e-6■■□□□ 12.6
SND1Q7KZF4 PLD3-224ENST00000602131 503 ntTSL 219.87■□□□□ 0.772e-18■■□□□ 12.6
SND1Q7KZF4 PLA2G15-206ENST00000564827 781 ntTSL 519.7■□□□□ 0.746e-6■■□□□ 12.6
SND1Q7KZF4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.61■□□□□ 0.736e-6■■□□□ 12.6
SND1Q7KZF4 PIK3IP1-204ENST00000443175 578 ntTSL 418.05■□□□□ 0.486e-6■■□□□ 12.6
SND1Q7KZF4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.24■□□□□ 0.356e-6■■□□□ 12.6
SND1Q7KZF4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.276e-6■■□□□ 12.6
SND1Q7KZF4 PLA2G15-211ENST00000568082 929 ntTSL 516.7■□□□□ 0.266e-6■■□□□ 12.6
SND1Q7KZF4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.89■□□□□ 0.136e-6■■□□□ 12.6
SND1Q7KZF4 PLD3-202ENST00000359274 745 ntTSL 315.83■□□□□ 0.123e-8■■□□□ 12.6
SND1Q7KZF4 PLA2G15-204ENST00000562449 950 ntTSL 315.41■□□□□ 0.066e-6■■□□□ 12.6
SND1Q7KZF4 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.056e-6■■□□□ 12.6
SND1Q7KZF4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.056e-6■■□□□ 12.6
SND1Q7KZF4 SLC39A11-209ENST00000580557 794 ntTSL 314.45□□□□□ -0.16e-6■■□□□ 12.6
SND1Q7KZF4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.36□□□□□ -0.116e-6■■□□□ 12.6
SND1Q7KZF4 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.186e-6■■□□□ 12.6
SND1Q7KZF4 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC13.08□□□□□ -0.326e-6■■□□□ 12.6
SND1Q7KZF4 SLC39A11-206ENST00000579491 692 ntTSL 313.07□□□□□ -0.326e-6■■□□□ 12.6
SND1Q7KZF4 SLC39A11-213ENST00000582769 567 ntTSL 513.07□□□□□ -0.326e-6■■□□□ 12.6
SND1Q7KZF4 SLC39A11-216ENST00000583715 589 ntTSL 512.51□□□□□ -0.416e-6■■□□□ 12.6
SND1Q7KZF4 PLA2G15-207ENST00000565460 3121 ntTSL 1 (best)11.93□□□□□ -0.56e-6■■□□□ 12.6
SND1Q7KZF4 SLC39A11-217ENST00000584129 747 ntTSL 311.72□□□□□ -0.536e-6■■□□□ 12.6
SND1Q7KZF4 SLC39A11-205ENST00000579319 439 ntTSL 311.36□□□□□ -0.596e-6■■□□□ 12.6
SND1Q7KZF4 TMEM33-206ENST00000510383 697 ntTSL 310.13□□□□□ -0.794e-8■■□□□ 12.6
SND1Q7KZF4 SLC39A11-214ENST00000583146 532 ntTSL 59.74□□□□□ -0.856e-6■■□□□ 12.6
SND1Q7KZF4 LOX-203ENST00000505593 1379 ntTSL 27.8□□□□□ -1.166e-6■■□□□ 12.6
SND1Q7KZF4 SLC39A11-211ENST00000581581 386 ntTSL 37.64□□□□□ -1.196e-6■■□□□ 12.6
SND1Q7KZF4 OAT-203ENST00000471127 751 ntTSL 28.37□□□□□ -1.078e-9■■□□□ 12.6
SND1Q7KZF4 TGFBR3-205ENST00000468996 569 ntTSL 410.97□□□□□ -0.654e-9■■□□□ 12.6
SND1Q7KZF4 C3-217ENST00000602053 621 ntTSL 28.23□□□□□ -1.091e-74■■□□□ 12.6
SND1Q7KZF4 SUN2-214ENST00000469086 1351 ntTSL 517.48■□□□□ 0.396e-7■■□□□ 12.5
SND1Q7KZF4 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.924e-8■■□□□ 12.5
SND1Q7KZF4 PSMC2-206ENST00000640277 1357 ntTSL 5 BASIC9.25□□□□□ -0.934e-8■■□□□ 12.5
SND1Q7KZF4 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.094e-8■■□□□ 12.5
SND1Q7KZF4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.433e-8■■□□□ 12.5
SND1Q7KZF4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.293e-8■■□□□ 12.5
SND1Q7KZF4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.263e-8■■□□□ 12.5
SND1Q7KZF4 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.163e-8■■□□□ 12.5
SND1Q7KZF4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.517e-7■■□□□ 12.5
SND1Q7KZF4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.167e-7■■□□□ 12.5
SND1Q7KZF4 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.177e-7■■□□□ 12.5
SND1Q7KZF4 SPDYA-205ENST00000462832 2081 ntTSL 24.38□□□□□ -1.717e-7■■□□□ 12.5
SND1Q7KZF4 SPTAN1-201ENST00000358161 7794 ntTSL 1 (best) BASIC11.38□□□□□ -0.591e-6■■□□□ 12.5
SND1Q7KZF4 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.751e-6■■□□□ 12.5
SND1Q7KZF4 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.761e-6■■□□□ 12.5
SND1Q7KZF4 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC9.53□□□□□ -0.881e-6■■□□□ 12.5
SND1Q7KZF4 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC9.01□□□□□ -0.971e-6■■□□□ 12.5
SND1Q7KZF4 HLA-B-254ENST00000497377 917 nt11.89□□□□□ -0.514e-8■■□□□ 12.5
SND1Q7KZF4 HLA-B-253ENST00000481849 753 nt9.25□□□□□ -0.934e-8■■□□□ 12.5
SND1Q7KZF4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.371e-6■■□□□ 12.5
SND1Q7KZF4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.493e-7■■□□□ 12.5
SND1Q7KZF4 SLCO4A1-207ENST00000495889 543 ntTSL 317.58■□□□□ 0.49e-8■■□□□ 12.5
SND1Q7KZF4 SLCO4A1-205ENST00000466961 819 ntTSL 314.21□□□□□ -0.139e-8■■□□□ 12.5
SND1Q7KZF4 SLCO4A1-206ENST00000470412 986 ntTSL 511.6□□□□□ -0.559e-8■■□□□ 12.5
SND1Q7KZF4 IGSF1-207ENST00000467244 849 ntTSL 211.99□□□□□ -0.491e-6■■□□□ 12.5
SND1Q7KZF4 GARS-202ENST00000444666 619 ntTSL 34.72□□□□□ -1.653e-7■■□□□ 12.5
SND1Q7KZF4 TAPBP-240ENST00000480730 2202 ntTSL 1 (best)19.63■□□□□ 0.733e-9■■□□□ 12.5
SND1Q7KZF4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.673e-9■■□□□ 12.5
SND1Q7KZF4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.483e-9■■□□□ 12.5
SND1Q7KZF4 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 03e-9■■□□□ 12.5
SND1Q7KZF4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.54□□□□□ -0.083e-9■■□□□ 12.5
SND1Q7KZF4 RHBDD2-204ENST00000454791 1831 ntTSL 226.41■■□□□ 1.824e-6■■□□□ 12.5
SND1Q7KZF4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.78■■□□□ 1.724e-6■■□□□ 12.5
SND1Q7KZF4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.24e-6■■□□□ 12.5
SND1Q7KZF4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.73□□□□□ -0.054e-6■■□□□ 12.5
SND1Q7KZF4 RHBDD2-207ENST00000468304 803 ntTSL 213.88□□□□□ -0.194e-6■■□□□ 12.5
SND1Q7KZF4 RHBDD2-206ENST00000467406 636 ntTSL 210.1□□□□□ -0.794e-6■■□□□ 12.5
SND1Q7KZF4 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.073e-8■■□□□ 12.5
SND1Q7KZF4 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.59□□□□□ -0.073e-8■■□□□ 12.5
SND1Q7KZF4 NDUFA7-202ENST00000593729 569 ntTSL 215.88■□□□□ 0.131e-7■■□□□ 12.5
SND1Q7KZF4 NDUFA7-204ENST00000601101 414 ntTSL 415.6■□□□□ 0.091e-7■■□□□ 12.5
SND1Q7KZF4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.031e-7■■□□□ 12.5
SND1Q7KZF4 NDUFA7-206ENST00000602059 528 ntTSL 413.17□□□□□ -0.31e-7■■□□□ 12.5
SND1Q7KZF4 NDUFA7-201ENST00000301457 601 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.451e-7■■□□□ 12.5
SND1Q7KZF4 NDUFA7-205ENST00000601258 547 ntTSL 210.82□□□□□ -0.681e-7■■□□□ 12.5
SND1Q7KZF4 NDUFA7-203ENST00000595856 553 ntTSL 510.72□□□□□ -0.691e-7■■□□□ 12.5
Retrieved 100 of 13,567 protein–RNA pairs in 86.6 ms