RNA–Protein interactions for RNA: ENST00000292644.4

PSMC2-201, Transcript of proteasome 26S subunit, ATPase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMC2, Length 2,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC2-201ENST00000292644 NISCHQ9Y2I1 1504 aa18.17■□□□□ 0.5
PSMC2-201ENST00000292644 CCDC180Q9P1Z9 1646 aa15.55■□□□□ 0.08
PSMC2-201ENST00000292644 SHROOM4Q9ULL8 1493 aa15.42■□□□□ 0.06
PSMC2-201ENST00000292644 ZCCHC6Q5VYS8 1495 aaKnown RBP15.33■□□□□ 0.04
PSMC2-201ENST00000292644 DCAF8L2P0C7V8 631 aa15.18■□□□□ 0.02
PSMC2-201ENST00000292644 SUPT5HO00267 1087 aaKnown RBP15.03■□□□□ -0
PSMC2-201ENST00000292644 DCAF1Q9Y4B6 1507 aa14.88□□□□□ -0.03
PSMC2-201ENST00000292644 SCRIBQ14160 1630 aa14.58□□□□□ -0.08
PSMC2-201ENST00000292644 ABCC9O60706 1549 aa14.57□□□□□ -0.08
PSMC2-201ENST00000292644 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
PSMC2-201ENST00000292644 CHIC1Q5VXU3 224 aa14.49□□□□□ -0.09
PSMC2-201ENST00000292644 NACADO15069 1562 aa14.4□□□□□ -0.1
PSMC2-201ENST00000292644 RSF1Q96T23 1441 aaPredicted RBP14.31□□□□□ -0.12
PSMC2-201ENST00000292644 RB1CC1Q8TDY2 1594 aa14.22□□□□□ -0.13
PSMC2-201ENST00000292644 CECR2Q9BXF3 1484 aa14.2□□□□□ -0.14
PSMC2-201ENST00000292644 MROH2BQ7Z745 1585 aa14.14□□□□□ -0.15
PSMC2-201ENST00000292644 LOC105371045A0A1W2PR82 267 aa14.08□□□□□ -0.16
PSMC2-201ENST00000292644 WIZO95785 1651 aa14.08□□□□□ -0.16
PSMC2-201ENST00000292644 UNC13AQ9UPW8 1703 aa14.06□□□□□ -0.16
PSMC2-201ENST00000292644 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
PSMC2-201ENST00000292644 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
PSMC2-201ENST00000292644 PABPN1Q86U42 306 aaKnown RBP eCLIP13.91□□□□□ -0.18
PSMC2-201ENST00000292644 FAM9AQ8IZU1 332 aaPredicted RBP13.91□□□□□ -0.18
PSMC2-201ENST00000292644 SMARCA4P51532 1647 aa13.89□□□□□ -0.19
PSMC2-201ENST00000292644 PCGF6Q9BYE7 350 aa13.89□□□□□ -0.19
PSMC2-201ENST00000292644 BICRAQ9NZM4 1560 aa13.84□□□□□ -0.19
PSMC2-201ENST00000292644 EHMT2Q96KQ7 1210 aa13.82□□□□□ -0.2
PSMC2-201ENST00000292644 TOP2AP11388 1531 aaKnown RBP13.82□□□□□ -0.2
PSMC2-201ENST00000292644 EIF4G1Q04637 1599 aaKnown RBP13.77□□□□□ -0.21
PSMC2-201ENST00000292644 CCDC88BA6NC98 1476 aa13.76□□□□□ -0.21
PSMC2-201ENST00000292644 SMARCA2P51531 1590 aa13.75□□□□□ -0.21
PSMC2-201ENST00000292644 HRCP23327 699 aa13.74□□□□□ -0.21
PSMC2-201ENST00000292644 ABCC8Q09428 1581 aa13.7□□□□□ -0.22
PSMC2-201ENST00000292644 TRIM26Q12899 539 aaPredicted RBP13.64□□□□□ -0.23
PSMC2-201ENST00000292644 PEG3Q9GZU2 1588 aa13.6□□□□□ -0.23
PSMC2-201ENST00000292644 ATAD2BQ9ULI0 1458 aa13.56□□□□□ -0.24
PSMC2-201ENST00000292644 BAZ1BQ9UIG0 1483 aaKnown RBP13.54□□□□□ -0.24
PSMC2-201ENST00000292644 PPARGC1BQ86YN6 1023 aaKnown RBP13.52□□□□□ -0.24
PSMC2-201ENST00000292644 SOGA1O94964 1423 aa13.51□□□□□ -0.25
PSMC2-201ENST00000292644 RUSC2Q8N2Y8 1516 aa13.46□□□□□ -0.25
PSMC2-201ENST00000292644 WRNQ14191 1432 aaPredicted RBP eCLIP13.45□□□□□ -0.26
PSMC2-201ENST00000292644 SYNJ1O43426 1573 aa13.42□□□□□ -0.26
PSMC2-201ENST00000292644 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
PSMC2-201ENST00000292644 EEA1Q15075 1411 aa13.38□□□□□ -0.27
PSMC2-201ENST00000292644 UBTFP17480 764 aaKnown RBP13.37□□□□□ -0.27
PSMC2-201ENST00000292644 CEP162Q5TB80 1403 aa13.36□□□□□ -0.27
PSMC2-201ENST00000292644 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.28
PSMC2-201ENST00000292644 TTBK1Q5TCY1 1321 aaPredicted RBP13.33□□□□□ -0.28
PSMC2-201ENST00000292644 NCAPD3P42695 1498 aa13.31□□□□□ -0.28
PSMC2-201ENST00000292644 HMGXB3Q12766 1538 aa13.31□□□□□ -0.28
PSMC2-201ENST00000292644 GOLGA3Q08378 1498 aa13.31□□□□□ -0.28
PSMC2-201ENST00000292644 TOP2BQ02880 1626 aa13.25□□□□□ -0.29
PSMC2-201ENST00000292644 CEP164Q9UPV0 1460 aa13.24□□□□□ -0.29
PSMC2-201ENST00000292644 ZEB1P37275 1124 aaPredicted RBP13.24□□□□□ -0.29
PSMC2-201ENST00000292644 KIF21BO75037 1637 aa13.23□□□□□ -0.29
PSMC2-201ENST00000292644 BIVM-ERCC5R4GMW8 1640 aa13.22□□□□□ -0.29
PSMC2-201ENST00000292644 RANGAP1P46060 587 aaPredicted RBP13.19□□□□□ -0.3
PSMC2-201ENST00000292644 RAPGEF2Q9Y4G8 1499 aa13.19□□□□□ -0.3
PSMC2-201ENST00000292644 CUX1P39880 1505 aa13.17□□□□□ -0.3
PSMC2-201ENST00000292644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.17□□□□□ -0.3
PSMC2-201ENST00000292644 CFTRP13569 1480 aa13.16□□□□□ -0.3
PSMC2-201ENST00000292644 CLIP1P30622 1438 aa13.15□□□□□ -0.3
PSMC2-201ENST00000292644 CC2D2AQ9P2K1 1620 aa13.12□□□□□ -0.31
PSMC2-201ENST00000292644 CCER1Q8TC90 406 aaPredicted RBP13.11□□□□□ -0.31
PSMC2-201ENST00000292644 PRDM2Q13029 1718 aa13.11□□□□□ -0.31
PSMC2-201ENST00000292644 VPS8Q8N3P4 1428 aa13.06□□□□□ -0.32
PSMC2-201ENST00000292644 CADPSQ9ULU8 1353 aa13.06□□□□□ -0.32
PSMC2-201ENST00000292644 PRXQ9BXM0 1461 aa13.05□□□□□ -0.32
PSMC2-201ENST00000292644 KIF27Q86VH2 1401 aa13.05□□□□□ -0.32
PSMC2-201ENST00000292644 ERICH3Q5RHP9 1530 aa13.04□□□□□ -0.32
PSMC2-201ENST00000292644 APLP2Q06481 763 aa13.03□□□□□ -0.32
PSMC2-201ENST00000292644 CUX2O14529 1486 aa12.98□□□□□ -0.33
PSMC2-201ENST00000292644 HNRNPUL2Q1KMD3 747 aaKnown RBP12.98□□□□□ -0.33
PSMC2-201ENST00000292644 FGD5Q6ZNL6 1462 aa12.97□□□□□ -0.33
PSMC2-201ENST00000292644 ARAP1Q96P48 1450 aa12.96□□□□□ -0.33
PSMC2-201ENST00000292644 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
PSMC2-201ENST00000292644 NESP48681 1621 aa12.93□□□□□ -0.34
PSMC2-201ENST00000292644 IGF1RP08069 1367 aa12.92□□□□□ -0.34
PSMC2-201ENST00000292644 KANK4Q5T7N3 995 aaPredicted RBP12.88□□□□□ -0.35
PSMC2-201ENST00000292644 ARHGAP35Q9NRY4 1499 aa12.88□□□□□ -0.35
PSMC2-201ENST00000292644 CARMIL1Q5VZK9 1371 aa12.87□□□□□ -0.35
PSMC2-201ENST00000292644 RAD54L2Q9Y4B4 1467 aa12.86□□□□□ -0.35
PSMC2-201ENST00000292644 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
PSMC2-201ENST00000292644 TOPBP1Q92547 1522 aa12.84□□□□□ -0.35
PSMC2-201ENST00000292644 DNAJC5BQ9UF47 199 aa12.84□□□□□ -0.35
PSMC2-201ENST00000292644 POLA1P09884 1462 aaPredicted RBP12.83□□□□□ -0.36
PSMC2-201ENST00000292644 LAMC3Q9Y6N6 1575 aa12.79□□□□□ -0.36
PSMC2-201ENST00000292644 ABCA10Q8WWZ4 1543 aa12.79□□□□□ -0.36
PSMC2-201ENST00000292644 P3H3Q8IVL6 736 aa12.78□□□□□ -0.36
PSMC2-201ENST00000292644 URB2Q14146 1524 aaKnown RBP12.78□□□□□ -0.36
PSMC2-201ENST00000292644 DIEXFQ68CQ4 756 aaKnown RBP12.74□□□□□ -0.37
PSMC2-201ENST00000292644 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
PSMC2-201ENST00000292644 ATP1B4Q9UN42 357 aaPredicted RBP12.73□□□□□ -0.37
PSMC2-201ENST00000292644 ITGAEP38570 1179 aa12.72□□□□□ -0.37
PSMC2-201ENST00000292644 CUL7Q14999 1698 aa12.71□□□□□ -0.37
PSMC2-201ENST00000292644 TDRD9Q8NDG6 1382 aaKnown RBP12.71□□□□□ -0.37
PSMC2-201ENST00000292644 WDR97A6NE52 1622 aa12.71□□□□□ -0.37
PSMC2-201ENST00000292644 TIAM1Q13009 1591 aa12.71□□□□□ -0.37
PSMC2-201ENST00000292644 PDS5BQ9NTI5 1447 aa12.71□□□□□ -0.37
PSMC2-201ENST00000292644 RRBP1Q9P2E9 1410 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms