Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDZRN4Q6ZMN7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDZRN4Q6ZMN7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.83■■□□□ 1.09
PDZRN4Q6ZMN7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDZRN4Q6ZMN7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDZRN4Q6ZMN7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDZRN4Q6ZMN7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDZRN4Q6ZMN7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDZRN4Q6ZMN7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDZRN4Q6ZMN7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDZRN4Q6ZMN7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDZRN4Q6ZMN7 SOX15-203ENST00000570788 1093 ntBASIC21.83■■□□□ 1.09
PDZRN4Q6ZMN7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.09
PDZRN4Q6ZMN7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDZRN4Q6ZMN7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDZRN4Q6ZMN7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
PDZRN4Q6ZMN7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PDZRN4Q6ZMN7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.83■■□□□ 1.08
PDZRN4Q6ZMN7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDZRN4Q6ZMN7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.83■■□□□ 1.08
PDZRN4Q6ZMN7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PDZRN4Q6ZMN7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.82■■□□□ 1.08
PDZRN4Q6ZMN7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 KRT17P3-201ENST00000420566 1262 ntBASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 AL356652.1-201ENST00000615962 565 ntBASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDZRN4Q6ZMN7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDZRN4Q6ZMN7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms