Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRFP11831 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.29■□□□□ 0.68
SRFP11831 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRFP11831 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRFP11831 Z83836.1-201ENST00000624605 1642 ntBASIC19.29■□□□□ 0.68
SRFP11831 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRFP11831 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.28■□□□□ 0.68
SRFP11831 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFP11831 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.28■□□□□ 0.68
SRFP11831 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFP11831 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SRFP11831 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.28■□□□□ 0.68
SRFP11831 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.28■□□□□ 0.68
SRFP11831 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.28■□□□□ 0.68
SRFP11831 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFP11831 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.28■□□□□ 0.68
SRFP11831 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.28■□□□□ 0.68
SRFP11831 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.28■□□□□ 0.68
SRFP11831 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
SRFP11831 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFP11831 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.28■□□□□ 0.68
SRFP11831 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.28■□□□□ 0.68
SRFP11831 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFP11831 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFP11831 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFP11831 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SRFP11831 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.28■□□□□ 0.68
SRFP11831 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFP11831 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.28■□□□□ 0.68
SRFP11831 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
SRFP11831 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRFP11831 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRFP11831 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.27■□□□□ 0.68
SRFP11831 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.27■□□□□ 0.68
SRFP11831 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SRFP11831 KRT8P3-201ENST00000519669 1449 ntBASIC19.27■□□□□ 0.68
SRFP11831 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SRFP11831 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRFP11831 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SRFP11831 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRFP11831 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRFP11831 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.27■□□□□ 0.68
SRFP11831 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SRFP11831 MRPL3P1-201ENST00000400109 1033 ntBASIC19.27■□□□□ 0.68
SRFP11831 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SRFP11831 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.27■□□□□ 0.68
SRFP11831 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.27■□□□□ 0.68
SRFP11831 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.27■□□□□ 0.68
SRFP11831 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.27■□□□□ 0.68
SRFP11831 AC074051.2-201ENST00000565115 352 ntBASIC19.27■□□□□ 0.68
SRFP11831 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.27■□□□□ 0.68
SRFP11831 AC138894.3-201ENST00000603787 634 ntBASIC19.27■□□□□ 0.68
SRFP11831 AL353801.3-201ENST00000609898 542 ntBASIC19.27■□□□□ 0.68
SRFP11831 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.27■□□□□ 0.68
SRFP11831 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRFP11831 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SRFP11831 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRFP11831 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRFP11831 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.67
SRFP11831 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRFP11831 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRFP11831 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
SRFP11831 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFP11831 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFP11831 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFP11831 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.26■□□□□ 0.67
SRFP11831 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SRFP11831 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFP11831 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SRFP11831 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFP11831 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFP11831 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.26■□□□□ 0.67
SRFP11831 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRFP11831 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFP11831 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFP11831 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRFP11831 KRT16P4-201ENST00000453883 522 ntBASIC19.26■□□□□ 0.67
SRFP11831 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.26■□□□□ 0.67
SRFP11831 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRFP11831 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRFP11831 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.26■□□□□ 0.67
SRFP11831 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SRFP11831 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SRFP11831 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.25■□□□□ 0.67
SRFP11831 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.25■□□□□ 0.67
SRFP11831 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.25■□□□□ 0.67
SRFP11831 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRFP11831 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRFP11831 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRFP11831 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.25■□□□□ 0.67
SRFP11831 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRFP11831 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SRFP11831 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRFP11831 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.25■□□□□ 0.67
SRFP11831 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRFP11831 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.25■□□□□ 0.67
SRFP11831 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.25■□□□□ 0.67
SRFP11831 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.25■□□□□ 0.67
SRFP11831 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRFP11831 AC120114.3-201ENST00000611923 658 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms