Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 BX276092.2-201ENST00000417668 665 ntBASIC17.62■□□□□ 0.41
TNFRSF11BO00300 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFRSF11BO00300 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 RAP2CP1-201ENST00000605103 478 ntBASIC17.61■□□□□ 0.41
TNFRSF11BO00300 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 AC083906.6-201ENST00000641366 219 ntBASIC17.61■□□□□ 0.41
TNFRSF11BO00300 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TNFRSF11BO00300 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TNFRSF11BO00300 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.59■□□□□ 0.41
TNFRSF11BO00300 AC004911.1-201ENST00000416316 871 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms