Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC188H7C350 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC188H7C350 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC188H7C350 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC188H7C350 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC188H7C350 TUBB8P6-201ENST00000436895 1288 ntBASIC19.81■□□□□ 0.76
CCDC188H7C350 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC188H7C350 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC188H7C350 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC188H7C350 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC188H7C350 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC188H7C350 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC188H7C350 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC188H7C350 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC188H7C350 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC188H7C350 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC188H7C350 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC188H7C350 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC188H7C350 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CCDC188H7C350 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC188H7C350 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC188H7C350 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC188H7C350 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC188H7C350 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC188H7C350 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC188H7C350 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC188H7C350 TSPY21P-201ENST00000433481 731 ntBASIC19.8■□□□□ 0.76
CCDC188H7C350 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC188H7C350 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC188H7C350 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC188H7C350 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.8■□□□□ 0.76
CCDC188H7C350 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC188H7C350 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC188H7C350 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC188H7C350 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC188H7C350 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC188H7C350 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC188H7C350 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC188H7C350 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC188H7C350 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC188H7C350 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
CCDC188H7C350 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC188H7C350 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC188H7C350 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC188H7C350 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCDC188H7C350 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 AF201337.1-201ENST00000520239 748 ntBASIC19.79■□□□□ 0.76
CCDC188H7C350 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.79■□□□□ 0.76
CCDC188H7C350 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CCDC188H7C350 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CCDC188H7C350 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCDC188H7C350 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC188H7C350 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
CCDC188H7C350 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC188H7C350 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.79■□□□□ 0.76
CCDC188H7C350 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC188H7C350 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC188H7C350 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC188H7C350 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC188H7C350 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC188H7C350 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC188H7C350 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC188H7C350 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC188H7C350 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC188H7C350 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC188H7C350 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC188H7C350 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.78■□□□□ 0.76
CCDC188H7C350 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC188H7C350 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC188H7C350 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CCDC188H7C350 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC188H7C350 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC188H7C350 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC188H7C350 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC188H7C350 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC188H7C350 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC188H7C350 AC020916.1-201ENST00000587762 1774 ntBASIC19.78■□□□□ 0.76
CCDC188H7C350 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC188H7C350 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC188H7C350 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC188H7C350 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC188H7C350 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC188H7C350 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms