Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
CYSTM1Q9H1C7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 AC004687.1-201ENST00000579003 1625 ntBASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 AGGF1P2-201ENST00000426656 2106 ntBASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 LINC00602-201ENST00000629776 2065 ntBASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
CYSTM1Q9H1C7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 REXO1L9P-201ENST00000604264 2108 ntBASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CYSTM1Q9H1C7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
CYSTM1Q9H1C7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
CYSTM1Q9H1C7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
CYSTM1Q9H1C7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms