Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
HIST2H3AQ71DI3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIST2H3AQ71DI3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST2H3AQ71DI3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST2H3AQ71DI3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIST2H3AQ71DI3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
HIST2H3AQ71DI3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST2H3AQ71DI3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HIST2H3AQ71DI3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.76■□□□□ 0.27
HIST2H3AQ71DI3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HIST2H3AQ71DI3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST2H3AQ71DI3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HIST2H3AQ71DI3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 NIFKP9-201ENST00000419265 221 ntBASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 C1QBPP2-201ENST00000528754 825 ntBASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 ITM2C-210ENST00000620962 501 ntBASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HIST2H3AQ71DI3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 TSPY23P-201ENST00000440136 739 ntBASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HIST2H3AQ71DI3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 HTR7P1-201ENST00000538670 1336 ntBASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 AC006333.2-201ENST00000607957 2099 ntBASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 FAM201B-201ENST00000458407 597 ntBASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HIST2H3AQ71DI3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms