Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.04■□□□□ -0
CCL20P78556 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CCL20P78556 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.04■□□□□ -0
CCL20P78556 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL20P78556 AL645608.8-201ENST00000606034 2086 ntBASIC15.04■□□□□ -0
CCL20P78556 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.03■□□□□ -0
CCL20P78556 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.03■□□□□ -0
CCL20P78556 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.03■□□□□ -0
CCL20P78556 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.03■□□□□ -0
CCL20P78556 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.03■□□□□ -0
CCL20P78556 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CCL20P78556 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.03■□□□□ -0
CCL20P78556 AC097381.1-201ENST00000429019 1296 ntBASIC15.03■□□□□ -0
CCL20P78556 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.03■□□□□ -0
CCL20P78556 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.03■□□□□ -0
CCL20P78556 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.03■□□□□ -0
CCL20P78556 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.03■□□□□ -0
CCL20P78556 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.03■□□□□ -0
CCL20P78556 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.03■□□□□ -0
CCL20P78556 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.03■□□□□ -0
CCL20P78556 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.03■□□□□ -0
CCL20P78556 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.03■□□□□ -0
CCL20P78556 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.03■□□□□ -0
CCL20P78556 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.03■□□□□ -0
CCL20P78556 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCL20P78556 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL20P78556 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.03■□□□□ -0
CCL20P78556 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CCL20P78556 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CCL20P78556 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
CCL20P78556 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
CCL20P78556 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CCL20P78556 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CCL20P78556 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CCL20P78556 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CCL20P78556 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL20P78556 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CCL20P78556 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.02■□□□□ -0
CCL20P78556 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CCL20P78556 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL20P78556 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.02■□□□□ -0
CCL20P78556 AC012414.1-201ENST00000556676 535 ntBASIC15.02■□□□□ -0
CCL20P78556 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.02■□□□□ -0
CCL20P78556 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL20P78556 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.02□□□□□ -0.01
CCL20P78556 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.02□□□□□ -0.01
CCL20P78556 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CCL20P78556 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCL20P78556 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.02□□□□□ -0.01
CCL20P78556 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL20P78556 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL20P78556 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL20P78556 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCL20P78556 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL20P78556 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCL20P78556 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL20P78556 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL20P78556 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL20P78556 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CCL20P78556 SDHAP1-207ENST00000440850 2000 ntBASIC15.01□□□□□ -0.01
CCL20P78556 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL20P78556 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCL20P78556 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCL20P78556 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.01□□□□□ -0.01
CCL20P78556 DUX4L2-201ENST00000561772 1275 ntBASIC15.01□□□□□ -0.01
CCL20P78556 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
CCL20P78556 DUX4L6-201ENST00000626483 1275 ntBASIC15.01□□□□□ -0.01
CCL20P78556 DUX4L1-201ENST00000627662 1275 ntBASIC15.01□□□□□ -0.01
CCL20P78556 DUX4L8-201ENST00000629013 1275 ntBASIC15.01□□□□□ -0.01
CCL20P78556 DUX4L3-201ENST00000630187 1275 ntBASIC15.01□□□□□ -0.01
CCL20P78556 DUX4L7-201ENST00000630678 1275 ntBASIC15.01□□□□□ -0.01
CCL20P78556 DUX4L5-201ENST00000630834 1275 ntBASIC15.01□□□□□ -0.01
CCL20P78556 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CCL20P78556 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.01□□□□□ -0.01
CCL20P78556 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCL20P78556 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.01□□□□□ -0.01
CCL20P78556 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.01□□□□□ -0.01
CCL20P78556 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL20P78556 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL20P78556 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.01□□□□□ -0.01
CCL20P78556 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCL20P78556 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.01□□□□□ -0.01
CCL20P78556 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCL20P78556 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms