Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SLC1A1P43005 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A1P43005 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC1A1P43005 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC1A1P43005 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC1A1P43005 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC1A1P43005 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC1A1P43005 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
SLC1A1P43005 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC1A1P43005 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC1A1P43005 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC1A1P43005 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SLC1A1P43005 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC1A1P43005 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SLC1A1P43005 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.97■□□□□ 0.79
SLC1A1P43005 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SLC1A1P43005 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC1A1P43005 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.97■□□□□ 0.79
SLC1A1P43005 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC1A1P43005 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.97■□□□□ 0.79
SLC1A1P43005 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC1A1P43005 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SLC1A1P43005 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC1A1P43005 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC1A1P43005 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC1A1P43005 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
SLC1A1P43005 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC1A1P43005 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC1A1P43005 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC1A1P43005 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC1A1P43005 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC1A1P43005 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SLC1A1P43005 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC1A1P43005 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC1A1P43005 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC1A1P43005 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SLC1A1P43005 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC1A1P43005 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC1A1P43005 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC1A1P43005 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC1A1P43005 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC1A1P43005 KRT16P5-201ENST00000455284 522 ntBASIC19.96■□□□□ 0.79
SLC1A1P43005 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC1A1P43005 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SLC1A1P43005 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC1A1P43005 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC1A1P43005 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC1A1P43005 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC1A1P43005 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC1A1P43005 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC1A1P43005 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC1A1P43005 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC1A1P43005 WIZP1-201ENST00000531444 2299 ntBASIC19.96■□□□□ 0.79
SLC1A1P43005 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC1A1P43005 KRT8P41-201ENST00000533985 1514 ntBASIC19.96■□□□□ 0.79
SLC1A1P43005 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC1A1P43005 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC1A1P43005 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC1A1P43005 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC1A1P43005 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.95■□□□□ 0.79
SLC1A1P43005 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC1A1P43005 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC1A1P43005 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC1A1P43005 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC1A1P43005 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC1A1P43005 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SLC1A1P43005 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.95■□□□□ 0.78
SLC1A1P43005 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC1A1P43005 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC1A1P43005 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC1A1P43005 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC1A1P43005 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC1A1P43005 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC1A1P43005 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC1A1P43005 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC1A1P43005 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.95■□□□□ 0.78
SLC1A1P43005 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.95■□□□□ 0.78
SLC1A1P43005 AC233263.1-201ENST00000578059 224 ntBASIC19.95■□□□□ 0.78
SLC1A1P43005 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
SLC1A1P43005 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC1A1P43005 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC1A1P43005 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SLC1A1P43005 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
SLC1A1P43005 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC1A1P43005 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC1A1P43005 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC1A1P43005 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SLC1A1P43005 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC1A1P43005 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC1A1P43005 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC1A1P43005 AC239809.2-201ENST00000415381 517 ntBASIC19.94■□□□□ 0.78
SLC1A1P43005 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC1A1P43005 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC1A1P43005 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SLC1A1P43005 AL023875.1-201ENST00000640777 796 ntBASIC19.94■□□□□ 0.78
SLC1A1P43005 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC1A1P43005 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC1A1P43005 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC1A1P43005 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SLC1A1P43005 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms