Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 CLDN2-203ENST00000541806 3150 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 IGSF3-201ENST00000318837 3842 ntAPPRIS P4 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 snoU2-30.2-201ENST00000362805 70 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 RNA5SP443-201ENST00000363083 132 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 RNA5SP232-201ENST00000364144 119 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 RNU6-949P-201ENST00000384040 107 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 MIR7-2-201ENST00000384970 110 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 RN7SKP177-201ENST00000410567 355 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 AL441985.1-201ENST00000457727 251 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 RNU7-24P-201ENST00000458867 62 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 RN7SL325P-201ENST00000460434 283 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 RN7SL812P-201ENST00000493791 279 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 SNORA4.4-201ENST00000515921 135 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 RNU1-142P-201ENST00000516682 145 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 RNU6-856P-201ENST00000516959 98 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 AC068631.3-201ENST00000538831 225 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 CYCSP38-201ENST00000559840 322 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 AC015688.6-201ENST00000577737 104 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 MIR3154-201ENST00000577829 84 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 RN7SL778P-201ENST00000607160 297 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 Z97988.1-201ENST00000637697 135 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 PFKM-203ENST00000359794 3228 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 HLTF-202ENST00000392912 3896 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 PSMF1-202ENST00000333082 3686 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 CCDC144B-201ENST00000285176 4310 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 CCDC88A-202ENST00000336838 9505 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 CTPS2-202ENST00000380241 3526 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 AP002748.4-201ENST00000419755 3547 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 TATDN2-203ENST00000448281 4484 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 NBPF15-203ENST00000577412 4707 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 AC092111.1-201ENST00000618256 3358 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 CERS3-201ENST00000284382 3894 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 CALCOCO1-210ENST00000548263 3888 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 ABCA17P-204ENST00000494925 3478 ntBASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRTAP4-11Q9BYQ6 TRPV1-207ENST00000572705 4166 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 NAIP-208ENST00000517649 6124 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 BLOC1S6-201ENST00000220531 4037 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 SLC12A6-203ENST00000397702 4096 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 TRPV1-203ENST00000399759 4092 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 CELF2-205ENST00000542579 7982 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC2.09□□□□□ -2.07
KRTAP4-11Q9BYQ6 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms