RNA–Protein interactions for RNA: ENST00000254605.10

RRP8-201, Transcript of ribosomal RNA processing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP8, Length 6,560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-201ENST00000254605 DCAF8L2P0C7V8 631 aa15.55■□□□□ 0.08
RRP8-201ENST00000254605 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
RRP8-201ENST00000254605 SUPT5HO00267 1087 aaKnown RBP14.3□□□□□ -0.12
RRP8-201ENST00000254605 TTBK1Q5TCY1 1321 aaPredicted RBP14.06□□□□□ -0.16
RRP8-201ENST00000254605 SHROOM4Q9ULL8 1493 aa14.04□□□□□ -0.16
RRP8-201ENST00000254605 NISCHQ9Y2I1 1504 aa13.94□□□□□ -0.18
RRP8-201ENST00000254605 RANGAP1P46060 587 aaPredicted RBP13.9□□□□□ -0.18
RRP8-201ENST00000254605 FAM9AQ8IZU1 332 aaPredicted RBP13.74□□□□□ -0.21
RRP8-201ENST00000254605 APLP2Q06481 763 aa13.73□□□□□ -0.21
RRP8-201ENST00000254605 ATP1B4Q9UN42 357 aaPredicted RBP13.73□□□□□ -0.21
RRP8-201ENST00000254605 PELP1Q8IZL8 1130 aaKnown RBP13.62□□□□□ -0.23
RRP8-201ENST00000254605 ERICH6Q7L0X2 663 aa13.46□□□□□ -0.25
RRP8-201ENST00000254605 CHIC1Q5VXU3 224 aa13.45□□□□□ -0.26
RRP8-201ENST00000254605 PCGF6Q9BYE7 350 aa13.44□□□□□ -0.26
RRP8-201ENST00000254605 MYT1LQ9UL68 1186 aa13.37□□□□□ -0.27
RRP8-201ENST00000254605 CNGB1Q14028 1251 aaPredicted RBP13.29□□□□□ -0.28
RRP8-201ENST00000254605 YTHDC1Q96MU7 727 aaKnown RBP13.25□□□□□ -0.29
RRP8-201ENST00000254605 MYT1Q01538 1121 aa13.24□□□□□ -0.29
RRP8-201ENST00000254605 POLR3GLQ9BT43 218 aa13.23□□□□□ -0.29
RRP8-201ENST00000254605 PPARGC1BQ86YN6 1023 aaKnown RBP13.21□□□□□ -0.3
RRP8-201ENST00000254605 CCER1Q8TC90 406 aaPredicted RBP13.14□□□□□ -0.31
RRP8-201ENST00000254605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.12□□□□□ -0.31
RRP8-201ENST00000254605 HNRNPUL2Q1KMD3 747 aaKnown RBP13.12□□□□□ -0.31
RRP8-201ENST00000254605 UBTFP17480 764 aaKnown RBP13.11□□□□□ -0.31
RRP8-201ENST00000254605 SLC4A1APQ9BWU0 796 aaKnown RBP13.1□□□□□ -0.31
RRP8-201ENST00000254605 ITGAEP38570 1179 aa13.05□□□□□ -0.32
RRP8-201ENST00000254605 TRIM41Q8WV44 630 aa12.98□□□□□ -0.33
RRP8-201ENST00000254605 NEFLP07196 543 aa12.96□□□□□ -0.33
RRP8-201ENST00000254605 CENPBP07199 599 aaPredicted RBP12.92□□□□□ -0.34
RRP8-201ENST00000254605 BCL11AQ9H165 835 aa12.87□□□□□ -0.35
RRP8-201ENST00000254605 DAXXQ9UER7 740 aaPredicted RBP12.85□□□□□ -0.35
RRP8-201ENST00000254605 SLC24A1O60721 1099 aa12.8□□□□□ -0.36
RRP8-201ENST00000254605 PLPPR3Q6T4P5 718 aa12.75□□□□□ -0.37
RRP8-201ENST00000254605 CLSPNQ9HAW4 1339 aa12.67□□□□□ -0.38
RRP8-201ENST00000254605 BCANQ96GW7 911 aa12.63□□□□□ -0.39
RRP8-201ENST00000254605 ZEB1P37275 1124 aaPredicted RBP12.55□□□□□ -0.4
RRP8-201ENST00000254605 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
RRP8-201ENST00000254605 FBLN2P98095 1184 aa12.54□□□□□ -0.4
RRP8-201ENST00000254605 ZNF326Q5BKZ1 582 aaKnown RBP12.53□□□□□ -0.4
RRP8-201ENST00000254605 ARID3CA6NKF2 412 aa12.49□□□□□ -0.41
RRP8-201ENST00000254605 TRIM52Q96A61 297 aa12.49□□□□□ -0.41
RRP8-201ENST00000254605 FAM50AQ14320 339 aaKnown RBP12.48□□□□□ -0.41
RRP8-201ENST00000254605 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.42
RRP8-201ENST00000254605 NEUROD1Q13562 356 aa12.44□□□□□ -0.42
RRP8-201ENST00000254605 PLEKHG5O94827 1062 aa12.4□□□□□ -0.42
RRP8-201ENST00000254605 LOC105371045A0A1W2PR82 267 aa12.4□□□□□ -0.42
RRP8-201ENST00000254605 A0A0G2JS52 829 aa12.37□□□□□ -0.43
RRP8-201ENST00000254605 ZBTB47Q9UFB7 747 aaPredicted RBP12.36□□□□□ -0.43
RRP8-201ENST00000254605 SENP3Q9H4L4 574 aaPredicted RBP12.35□□□□□ -0.43
RRP8-201ENST00000254605 ABCC9O60706 1549 aa12.35□□□□□ -0.43
RRP8-201ENST00000254605 SCAF1Q9H7N4 1312 aaKnown RBP12.32□□□□□ -0.44
RRP8-201ENST00000254605 RTL5Q5HYW3 569 aaPredicted RBP12.31□□□□□ -0.44
RRP8-201ENST00000254605 CANXP27824 592 aaKnown RBP12.3□□□□□ -0.44
RRP8-201ENST00000254605 TRIM26Q12899 539 aaPredicted RBP12.22□□□□□ -0.45
RRP8-201ENST00000254605 P3H3Q8IVL6 736 aa12.22□□□□□ -0.45
RRP8-201ENST00000254605 HRCP23327 699 aa12.22□□□□□ -0.45
RRP8-201ENST00000254605 CHGAP10645 457 aaKnown RBP12.22□□□□□ -0.45
RRP8-201ENST00000254605 ZNF777Q9ULD5 760 aaPredicted RBP12.21□□□□□ -0.45
RRP8-201ENST00000254605 ESF1Q9H501 851 aaKnown RBP12.19□□□□□ -0.46
RRP8-201ENST00000254605 ZBTB7CA1YPR0 619 aa12.18□□□□□ -0.46
RRP8-201ENST00000254605 STAG3Q9UJ98 1225 aa12.17□□□□□ -0.46
RRP8-201ENST00000254605 NEFMP07197 916 aa12.15□□□□□ -0.47
RRP8-201ENST00000254605 NPM2Q86SE8 214 aaKnown RBP12.13□□□□□ -0.47
RRP8-201ENST00000254605 TULP1O00294 542 aaPredicted RBP12.1□□□□□ -0.47
RRP8-201ENST00000254605 SALL2Q9Y467 1007 aaPredicted RBP12.08□□□□□ -0.48
RRP8-201ENST00000254605 DIEXFQ68CQ4 756 aaKnown RBP12.07□□□□□ -0.48
RRP8-201ENST00000254605 ARXQ96QS3 562 aa12.04□□□□□ -0.48
RRP8-201ENST00000254605 ANP32CO43423 234 aa12.01□□□□□ -0.49
RRP8-201ENST00000254605 C14orf37Q86TY3 774 aa12.01□□□□□ -0.49
RRP8-201ENST00000254605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.98□□□□□ -0.491e-6■■■■□ 21.9
RRP8-201ENST00000254605 HSP90AA1P07900 732 aaKnown RBP11.96□□□□□ -0.5
RRP8-201ENST00000254605 NCBP3Q53F19 620 aaKnown RBP11.96□□□□□ -0.5
RRP8-201ENST00000254605 CDK11AQ9UQ88 783 aaPredicted RBP11.96□□□□□ -0.5
RRP8-201ENST00000254605 TAOK2Q9UL54 1235 aa11.94□□□□□ -0.5
RRP8-201ENST00000254605 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
RRP8-201ENST00000254605 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
RRP8-201ENST00000254605 SENP3-EIF4A1A0A087X0R7 540 aa11.88□□□□□ -0.51
RRP8-201ENST00000254605 EIF5BO60841 1220 aaKnown RBP11.88□□□□□ -0.51
RRP8-201ENST00000254605 NPM1P06748 294 aaKnown RBP eCLIP11.87□□□□□ -0.51
RRP8-201ENST00000254605 GTF3C3Q9Y5Q9 886 aa11.86□□□□□ -0.51
RRP8-201ENST00000254605 KDM2AQ9Y2K7 1162 aa11.83□□□□□ -0.52
RRP8-201ENST00000254605 FAM9BQ8IZU0 186 aa11.83□□□□□ -0.52
RRP8-201ENST00000254605 CHIC2Q9UKJ5 165 aa11.82□□□□□ -0.52
RRP8-201ENST00000254605 CDK11BP21127 795 aaKnown RBP11.81□□□□□ -0.52
RRP8-201ENST00000254605 ARID4BQ4LE39 1312 aaPredicted RBP11.8□□□□□ -0.52
RRP8-201ENST00000254605 LMOD2Q6P5Q4 547 aa11.78□□□□□ -0.52
RRP8-201ENST00000254605 ANP32AP39687 249 aaKnown RBP11.78□□□□□ -0.52
RRP8-201ENST00000254605 NPHP1O15259 732 aa11.78□□□□□ -0.52
RRP8-201ENST00000254605 CCDC180Q9P1Z9 1646 aa11.77□□□□□ -0.52
RRP8-201ENST00000254605 ANP32BQ92688 251 aaKnown RBP11.77□□□□□ -0.53
RRP8-201ENST00000254605 SCRIBQ14160 1630 aa11.76□□□□□ -0.53
RRP8-201ENST00000254605 NBR1Q14596 966 aa11.74□□□□□ -0.53
RRP8-201ENST00000254605 PPP1R15AO75807 674 aaPredicted RBP11.73□□□□□ -0.53
RRP8-201ENST00000254605 AMER1Q5JTC6 1135 aaPredicted RBP11.72□□□□□ -0.53
RRP8-201ENST00000254605 KCNH8Q96L42 1107 aa11.72□□□□□ -0.53
RRP8-201ENST00000254605 PPM1GO15355 546 aaPredicted RBP11.72□□□□□ -0.53
RRP8-201ENST00000254605 IRX6P78412 446 aaPredicted RBP11.71□□□□□ -0.54
RRP8-201ENST00000254605 HIRIP3Q9BW71 556 aaPredicted RBP11.71□□□□□ -0.54
RRP8-201ENST00000254605 FKBP8Q14318 412 aa11.69□□□□□ -0.54
RRP8-201ENST00000254605 UPF2Q9HAU5 1272 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms