RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 PELP1Q8IZL8 1130 aaKnown RBP17.09■□□□□ 0.33
BDNF-201ENST00000314915 MYT1Q01538 1121 aa16.92■□□□□ 0.3
BDNF-201ENST00000314915 TTBK1Q5TCY1 1321 aaPredicted RBP16.28■□□□□ 0.2
BDNF-201ENST00000314915 HRCP23327 699 aa15.6■□□□□ 0.09
BDNF-201ENST00000314915 ERICH6Q7L0X2 663 aa15.5■□□□□ 0.07
BDNF-201ENST00000314915 PRKCSHP14314 528 aaPredicted RBP15.48■□□□□ 0.07
BDNF-201ENST00000314915 APLP2Q06481 763 aa15.26■□□□□ 0.03
BDNF-201ENST00000314915 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
BDNF-201ENST00000314915 SLC24A1O60721 1099 aa15.2■□□□□ 0.02
BDNF-201ENST00000314915 BCL11AQ9H165 835 aa15.19■□□□□ 0.02
BDNF-201ENST00000314915 CENPBP07199 599 aaPredicted RBP14.94□□□□□ -0.02
BDNF-201ENST00000314915 PPARGC1BQ86YN6 1023 aaKnown RBP14.91□□□□□ -0.02
BDNF-201ENST00000314915 FAM9AQ8IZU1 332 aaPredicted RBP14.91□□□□□ -0.02
BDNF-201ENST00000314915 ACIN1Q9UKV3 1341 aaKnown RBP14.67□□□□□ -0.06
BDNF-201ENST00000314915 DAXXQ9UER7 740 aaPredicted RBP14.66□□□□□ -0.06
BDNF-201ENST00000314915 PCGF6Q9BYE7 350 aa14.59□□□□□ -0.07
BDNF-201ENST00000314915 ZEB1P37275 1124 aaPredicted RBP14.55□□□□□ -0.08
BDNF-201ENST00000314915 GTF3C3Q9Y5Q9 886 aa14.53□□□□□ -0.08
BDNF-201ENST00000314915 ANP32EQ9BTT0 268 aa14.52□□□□□ -0.08
BDNF-201ENST00000314915 NEUROD1Q13562 356 aa14.43□□□□□ -0.1
BDNF-201ENST00000314915 EIF5BO60841 1220 aaKnown RBP14.42□□□□□ -0.1
BDNF-201ENST00000314915 NISCHQ9Y2I1 1504 aa14.4□□□□□ -0.1
BDNF-201ENST00000314915 CSRNP3Q8WYN3 585 aa14.24□□□□□ -0.13
BDNF-201ENST00000314915 UBE2Q2Q8WVN8 375 aa14.18□□□□□ -0.14
BDNF-201ENST00000314915 TRIM26Q12899 539 aaPredicted RBP14.02□□□□□ -0.16
BDNF-201ENST00000314915 DCAF1Q9Y4B6 1507 aa14.01□□□□□ -0.17
BDNF-201ENST00000314915 ANO8Q9HCE9 1232 aaPredicted RBP14.01□□□□□ -0.17
BDNF-201ENST00000314915 CCDC180Q9P1Z9 1646 aa13.99□□□□□ -0.17
BDNF-201ENST00000314915 MYO15BQ96JP2 1530 aa13.95□□□□□ -0.18
BDNF-201ENST00000314915 MYT1LQ9UL68 1186 aa13.92□□□□□ -0.18
BDNF-201ENST00000314915 CLSPNQ9HAW4 1339 aa13.92□□□□□ -0.18
BDNF-201ENST00000314915 ERICH6BQ5W0A0 696 aa13.88□□□□□ -0.19
BDNF-201ENST00000314915 PODXL2Q9NZ53 605 aa13.87□□□□□ -0.19
BDNF-201ENST00000314915 PLEKHG5O94827 1062 aa13.86□□□□□ -0.19
BDNF-201ENST00000314915 PKNOX2Q96KN3 472 aa13.84□□□□□ -0.19
BDNF-201ENST00000314915 TSHZ2Q9NRE2 1034 aa13.81□□□□□ -0.2
BDNF-201ENST00000314915 DIEXFQ68CQ4 756 aaKnown RBP13.8□□□□□ -0.2
BDNF-201ENST00000314915 SUPT5HO00267 1087 aaKnown RBP13.71□□□□□ -0.22
BDNF-201ENST00000314915 SALL2Q9Y467 1007 aaPredicted RBP13.7□□□□□ -0.22
BDNF-201ENST00000314915 NEFLP07196 543 aa13.6□□□□□ -0.23
BDNF-201ENST00000314915 CCDC136Q96JN2 1154 aa13.59□□□□□ -0.23
BDNF-201ENST00000314915 SUPT16HQ9Y5B9 1047 aaKnown RBP13.58□□□□□ -0.24
BDNF-201ENST00000314915 DEKP35659 375 aaKnown RBP13.54□□□□□ -0.24
BDNF-201ENST00000314915 YTHDC1Q96MU7 727 aaKnown RBP13.54□□□□□ -0.24
BDNF-201ENST00000314915 RANGAP1P46060 587 aaPredicted RBP13.51□□□□□ -0.25
BDNF-201ENST00000314915 SHROOM4Q9ULL8 1493 aa13.49□□□□□ -0.25
BDNF-201ENST00000314915 CHIC1Q5VXU3 224 aa13.49□□□□□ -0.25
BDNF-201ENST00000314915 GLIPR1L2Q4G1C9 344 aa13.48□□□□□ -0.25
BDNF-201ENST00000314915 NCBP3Q53F19 620 aaKnown RBP13.45□□□□□ -0.26
BDNF-201ENST00000314915 TRIM41Q8WV44 630 aa13.43□□□□□ -0.26
BDNF-201ENST00000314915 RBM19Q9Y4C8 960 aaKnown RBP13.42□□□□□ -0.26
BDNF-201ENST00000314915 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.38□□□□□ -0.27
BDNF-201ENST00000314915 PDE4CQ08493 712 aa13.37□□□□□ -0.27
BDNF-201ENST00000314915 PDIA4P13667 645 aaKnown RBP13.35□□□□□ -0.27
BDNF-201ENST00000314915 CCER1Q8TC90 406 aaPredicted RBP13.35□□□□□ -0.27
BDNF-201ENST00000314915 ARXQ96QS3 562 aa13.35□□□□□ -0.27
BDNF-201ENST00000314915 FANCIQ9NVI1 1328 aa13.33□□□□□ -0.28
BDNF-201ENST00000314915 ZNF316A6NFI3 1004 aaPredicted RBP13.31□□□□□ -0.28
BDNF-201ENST00000314915 MSH5O43196 834 aa13.29□□□□□ -0.28
BDNF-201ENST00000314915 FGD1P98174 961 aa13.24□□□□□ -0.29
BDNF-201ENST00000314915 MIER1Q8N108 512 aa13.23□□□□□ -0.29
BDNF-201ENST00000314915 ZMYND15Q9H091 742 aa13.22□□□□□ -0.29
BDNF-201ENST00000314915 KLHL34Q8N239 644 aa13.19□□□□□ -0.3
BDNF-201ENST00000314915 IL27Q8NEV9 243 aa13.16□□□□□ -0.3
BDNF-201ENST00000314915 RSPH6AQ9H0K4 717 aa13.15□□□□□ -0.31
BDNF-201ENST00000314915 LOC105371045A0A1W2PR82 267 aa13.14□□□□□ -0.31
BDNF-201ENST00000314915 VSIG10Q8N0Z9 540 aa13.14□□□□□ -0.31
BDNF-201ENST00000314915 RTN4Q9NQC3 1192 aaKnown RBP13.13□□□□□ -0.31
BDNF-201ENST00000314915 TAF7LQ5H9L4 462 aa13.12□□□□□ -0.31
BDNF-201ENST00000314915 AAMPQ13685 434 aa13.12□□□□□ -0.31
BDNF-201ENST00000314915 A0A0U1RQG5 324 aaPredicted RBP13.1□□□□□ -0.31
BDNF-201ENST00000314915 RTL5Q5HYW3 569 aaPredicted RBP13.1□□□□□ -0.31
BDNF-201ENST00000314915 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.09□□□□□ -0.31
BDNF-201ENST00000314915 RBM10P98175 930 aaKnown RBP13.07□□□□□ -0.32
BDNF-201ENST00000314915 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
BDNF-201ENST00000314915 C11orf95C9JLR9 678 aaPredicted RBP13.01□□□□□ -0.33
BDNF-201ENST00000314915 BCANQ96GW7 911 aa13□□□□□ -0.33
BDNF-201ENST00000314915 FKBP8Q14318 412 aa12.98□□□□□ -0.33
BDNF-201ENST00000314915 CDK11AQ9UQ88 783 aaPredicted RBP12.97□□□□□ -0.33
BDNF-201ENST00000314915 NBR1Q14596 966 aa12.96□□□□□ -0.33
BDNF-201ENST00000314915 ZNF326Q5BKZ1 582 aaKnown RBP12.96□□□□□ -0.34
BDNF-201ENST00000314915 NOP58Q9Y2X3 529 aaKnown RBP12.95□□□□□ -0.34
BDNF-201ENST00000314915 TIMELESSQ9UNS1 1208 aa12.94□□□□□ -0.34
BDNF-201ENST00000314915 HOMEZQ8IX15 550 aa12.87□□□□□ -0.35
BDNF-201ENST00000314915 RRP9O43818 475 aaKnown RBP12.85□□□□□ -0.35
BDNF-201ENST00000314915 AEBP2Q6ZN18 517 aaPredicted RBP12.84□□□□□ -0.35
BDNF-201ENST00000314915 USP35Q9P2H5 1018 aa12.82□□□□□ -0.36
BDNF-201ENST00000314915 WASHC2CQ9Y4E1 1318 aa12.82□□□□□ -0.36
BDNF-201ENST00000314915 HSP90AA2PQ14568 343 aaPredicted RBP12.82□□□□□ -0.36
BDNF-201ENST00000314915 BRD2P25440 801 aaKnown RBP12.8□□□□□ -0.36
BDNF-201ENST00000314915 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
BDNF-201ENST00000314915 WASHC2AQ641Q2 1341 aa12.8□□□□□ -0.36
BDNF-201ENST00000314915 RSPH4AQ5TD94 716 aa12.8□□□□□ -0.36
BDNF-201ENST00000314915 ITGAEP38570 1179 aa12.78□□□□□ -0.36
BDNF-201ENST00000314915 FAM43AQ8N2R8 423 aa12.78□□□□□ -0.36
BDNF-201ENST00000314915 NAP1L5Q96NT1 182 aaPredicted RBP12.77□□□□□ -0.37
BDNF-201ENST00000314915 DCAF8L2P0C7V8 631 aa12.75□□□□□ -0.37
BDNF-201ENST00000314915 NEFMP07197 916 aa12.72□□□□□ -0.37
BDNF-201ENST00000314915 NAP1L2Q9ULW6 460 aaPredicted RBP12.71□□□□□ -0.37
BDNF-201ENST00000314915 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms