RNA–Protein interactions for RNA: ENST00000541806.5

CLDN2-203, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 3,150 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-203ENST00000541806 NISCHQ9Y2I1 1504 aa18.08■□□□□ 0.48
CLDN2-203ENST00000541806 SHROOM4Q9ULL8 1493 aa15.6■□□□□ 0.09
CLDN2-203ENST00000541806 DCAF8L2P0C7V8 631 aa15.46■□□□□ 0.06
CLDN2-203ENST00000541806 CCDC180Q9P1Z9 1646 aa15.3■□□□□ 0.04
CLDN2-203ENST00000541806 SUPT5HO00267 1087 aaKnown RBP15.23■□□□□ 0.03
CLDN2-203ENST00000541806 ZCCHC6Q5VYS8 1495 aaKnown RBP15.22■□□□□ 0.03
CLDN2-203ENST00000541806 DCAF1Q9Y4B6 1507 aa14.7□□□□□ -0.06
CLDN2-203ENST00000541806 ABCC9O60706 1549 aa14.65□□□□□ -0.06
CLDN2-203ENST00000541806 CHIC1Q5VXU3 224 aa14.57□□□□□ -0.08
CLDN2-203ENST00000541806 SCRIBQ14160 1630 aa14.54□□□□□ -0.08
CLDN2-203ENST00000541806 MYO15BQ96JP2 1530 aa14.41□□□□□ -0.1
CLDN2-203ENST00000541806 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
CLDN2-203ENST00000541806 NACADO15069 1562 aa14.28□□□□□ -0.12
CLDN2-203ENST00000541806 LOC105371045A0A1W2PR82 267 aa14.24□□□□□ -0.13
CLDN2-203ENST00000541806 CECR2Q9BXF3 1484 aa14.21□□□□□ -0.13
CLDN2-203ENST00000541806 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
CLDN2-203ENST00000541806 FAM9AQ8IZU1 332 aaPredicted RBP14.13□□□□□ -0.15
CLDN2-203ENST00000541806 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
CLDN2-203ENST00000541806 RB1CC1Q8TDY2 1594 aa14.12□□□□□ -0.15
CLDN2-203ENST00000541806 TRIM41Q8WV44 630 aa14.12□□□□□ -0.15
CLDN2-203ENST00000541806 MROH2BQ7Z745 1585 aa14.1□□□□□ -0.15
CLDN2-203ENST00000541806 PABPN1Q86U42 306 aaKnown RBP eCLIP14.08□□□□□ -0.16
CLDN2-203ENST00000541806 PCGF6Q9BYE7 350 aa14.05□□□□□ -0.16
CLDN2-203ENST00000541806 WIZO95785 1651 aa14□□□□□ -0.17
CLDN2-203ENST00000541806 MYT1Q01538 1121 aa13.97□□□□□ -0.17
CLDN2-203ENST00000541806 BAZ1AQ9NRL2 1556 aaPredicted RBP13.89□□□□□ -0.19
CLDN2-203ENST00000541806 UNC13AQ9UPW8 1703 aa13.82□□□□□ -0.2
CLDN2-203ENST00000541806 HRCP23327 699 aa13.79□□□□□ -0.2
CLDN2-203ENST00000541806 SMARCA4P51532 1647 aa13.78□□□□□ -0.2
CLDN2-203ENST00000541806 CCDC88BA6NC98 1476 aa13.74□□□□□ -0.21
CLDN2-203ENST00000541806 PPARGC1BQ86YN6 1023 aaKnown RBP13.72□□□□□ -0.21
CLDN2-203ENST00000541806 BICRAQ9NZM4 1560 aa13.72□□□□□ -0.21
CLDN2-203ENST00000541806 TOP2AP11388 1531 aaKnown RBP13.72□□□□□ -0.21
CLDN2-203ENST00000541806 TRIM26Q12899 539 aaPredicted RBP13.7□□□□□ -0.22
CLDN2-203ENST00000541806 ABCC8Q09428 1581 aa13.69□□□□□ -0.22
CLDN2-203ENST00000541806 SMARCA2P51531 1590 aa13.65□□□□□ -0.22
CLDN2-203ENST00000541806 TTBK1Q5TCY1 1321 aaPredicted RBP13.6□□□□□ -0.23
CLDN2-203ENST00000541806 EIF4G1Q04637 1599 aaKnown RBP13.58□□□□□ -0.24
CLDN2-203ENST00000541806 SOGA1O94964 1423 aa13.55□□□□□ -0.24
CLDN2-203ENST00000541806 UBTFP17480 764 aaKnown RBP13.53□□□□□ -0.24
CLDN2-203ENST00000541806 ATAD2BQ9ULI0 1458 aa13.53□□□□□ -0.24
CLDN2-203ENST00000541806 BAZ1BQ9UIG0 1483 aaKnown RBP13.52□□□□□ -0.25
CLDN2-203ENST00000541806 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
CLDN2-203ENST00000541806 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
CLDN2-203ENST00000541806 WRNQ14191 1432 aaPredicted RBP eCLIP13.46□□□□□ -0.25
CLDN2-203ENST00000541806 RANGAP1P46060 587 aaPredicted RBP13.46□□□□□ -0.25
CLDN2-203ENST00000541806 PEG3Q9GZU2 1588 aa13.43□□□□□ -0.26
CLDN2-203ENST00000541806 CEP162Q5TB80 1403 aa13.37□□□□□ -0.27
CLDN2-203ENST00000541806 SYNJ1O43426 1573 aa13.34□□□□□ -0.27
CLDN2-203ENST00000541806 TNIKQ9UKE5 1360 aa13.32□□□□□ -0.28
CLDN2-203ENST00000541806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.32□□□□□ -0.28
CLDN2-203ENST00000541806 EEA1Q15075 1411 aa13.31□□□□□ -0.28
CLDN2-203ENST00000541806 GOLGA3Q08378 1498 aa13.28□□□□□ -0.28
CLDN2-203ENST00000541806 ZEB1P37275 1124 aaPredicted RBP13.27□□□□□ -0.28
CLDN2-203ENST00000541806 CCER1Q8TC90 406 aaPredicted RBP13.26□□□□□ -0.29
CLDN2-203ENST00000541806 NCAPD3P42695 1498 aa13.26□□□□□ -0.29
CLDN2-203ENST00000541806 CEP164Q9UPV0 1460 aa13.21□□□□□ -0.29
CLDN2-203ENST00000541806 RAPGEF2Q9Y4G8 1499 aa13.2□□□□□ -0.3
CLDN2-203ENST00000541806 CLIP1P30622 1438 aa13.18□□□□□ -0.3
CLDN2-203ENST00000541806 HMGXB3Q12766 1538 aa13.18□□□□□ -0.3
CLDN2-203ENST00000541806 APLP2Q06481 763 aa13.18□□□□□ -0.3
CLDN2-203ENST00000541806 HNRNPUL2Q1KMD3 747 aaKnown RBP13.15□□□□□ -0.3
CLDN2-203ENST00000541806 TOP2BQ02880 1626 aa13.14□□□□□ -0.31
CLDN2-203ENST00000541806 CUX1P39880 1505 aa13.12□□□□□ -0.31
CLDN2-203ENST00000541806 CFTRP13569 1480 aa13.11□□□□□ -0.31
CLDN2-203ENST00000541806 KIF21BO75037 1637 aa13.1□□□□□ -0.31
CLDN2-203ENST00000541806 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
CLDN2-203ENST00000541806 KIF27Q86VH2 1401 aa13.06□□□□□ -0.32
CLDN2-203ENST00000541806 CC2D2AQ9P2K1 1620 aa13.06□□□□□ -0.32
CLDN2-203ENST00000541806 BIVM-ERCC5R4GMW8 1640 aa13.04□□□□□ -0.32
CLDN2-203ENST00000541806 VPS8Q8N3P4 1428 aa13.04□□□□□ -0.32
CLDN2-203ENST00000541806 CUX2O14529 1486 aa13.02□□□□□ -0.33
CLDN2-203ENST00000541806 PRXQ9BXM0 1461 aa13□□□□□ -0.33
CLDN2-203ENST00000541806 DNAJC5BQ9UF47 199 aa12.99□□□□□ -0.33
CLDN2-203ENST00000541806 SLC24A1O60721 1099 aa12.97□□□□□ -0.33
CLDN2-203ENST00000541806 KANK4Q5T7N3 995 aaPredicted RBP12.97□□□□□ -0.33
CLDN2-203ENST00000541806 P3H3Q8IVL6 736 aa12.97□□□□□ -0.33
CLDN2-203ENST00000541806 NESP48681 1621 aa12.97□□□□□ -0.33
CLDN2-203ENST00000541806 PRKCSHP14314 528 aaPredicted RBP12.97□□□□□ -0.33
CLDN2-203ENST00000541806 ATP1B4Q9UN42 357 aaPredicted RBP12.96□□□□□ -0.33
CLDN2-203ENST00000541806 FGD5Q6ZNL6 1462 aa12.95□□□□□ -0.34
CLDN2-203ENST00000541806 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
CLDN2-203ENST00000541806 IGF1RP08069 1367 aa12.94□□□□□ -0.34
CLDN2-203ENST00000541806 ITGAEP38570 1179 aa12.93□□□□□ -0.34
CLDN2-203ENST00000541806 ERICH3Q5RHP9 1530 aa12.92□□□□□ -0.34
CLDN2-203ENST00000541806 ARAP1Q96P48 1450 aa12.92□□□□□ -0.34
CLDN2-203ENST00000541806 CARMIL1Q5VZK9 1371 aa12.92□□□□□ -0.34
CLDN2-203ENST00000541806 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
CLDN2-203ENST00000541806 ARHGAP35Q9NRY4 1499 aa12.85□□□□□ -0.35
CLDN2-203ENST00000541806 ERICH6Q7L0X2 663 aa12.85□□□□□ -0.35
CLDN2-203ENST00000541806 DIEXFQ68CQ4 756 aaKnown RBP12.84□□□□□ -0.35
CLDN2-203ENST00000541806 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
CLDN2-203ENST00000541806 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
CLDN2-203ENST00000541806 TOPBP1Q92547 1522 aa12.81□□□□□ -0.36
CLDN2-203ENST00000541806 POLA1P09884 1462 aaPredicted RBP12.81□□□□□ -0.36
CLDN2-203ENST00000541806 SCAF1Q9H7N4 1312 aaKnown RBP12.78□□□□□ -0.36
CLDN2-203ENST00000541806 DNMBPQ6XZF7 1577 aa12.77□□□□□ -0.37
CLDN2-203ENST00000541806 ZNF316A6NFI3 1004 aaPredicted RBP12.76□□□□□ -0.37
CLDN2-203ENST00000541806 FAM50AQ14320 339 aaKnown RBP12.76□□□□□ -0.37
CLDN2-203ENST00000541806 FHOD3Q2V2M9 1422 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms