RNA–Protein interactions for RNA: ENST00000600419.5

ERVK-28-203, Transcript of endogenous retrovirus group K member 28, humanhuman

TSL 1 (best) BASIC

Gene ERVK-28, Length 457 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVK-28-203ENST00000600419 NISCHQ9Y2I1 1504 aa12.23□□□□□ -0.45
ERVK-28-203ENST00000600419 CCDC180Q9P1Z9 1646 aa10.79□□□□□ -0.68
ERVK-28-203ENST00000600419 ZCCHC6Q5VYS8 1495 aaKnown RBP10.26□□□□□ -0.77
ERVK-28-203ENST00000600419 DCAF1Q9Y4B6 1507 aa10.17□□□□□ -0.78
ERVK-28-203ENST00000600419 MYO15BQ96JP2 1530 aa10.06□□□□□ -0.8
ERVK-28-203ENST00000600419 DCAF8L2P0C7V8 631 aa10.05□□□□□ -0.8
ERVK-28-203ENST00000600419 ABCC9O60706 1549 aa10.03□□□□□ -0.8
ERVK-28-203ENST00000600419 NACADO15069 1562 aa10.01□□□□□ -0.81
ERVK-28-203ENST00000600419 RB1CC1Q8TDY2 1594 aa9.92□□□□□ -0.82
ERVK-28-203ENST00000600419 SHROOM4Q9ULL8 1493 aa9.88□□□□□ -0.83
ERVK-28-203ENST00000600419 SCRIBQ14160 1630 aa9.81□□□□□ -0.84
ERVK-28-203ENST00000600419 UNC13AQ9UPW8 1703 aa9.74□□□□□ -0.85
ERVK-28-203ENST00000600419 SUPT5HO00267 1087 aaKnown RBP9.54□□□□□ -0.88
ERVK-28-203ENST00000600419 BICRAQ9NZM4 1560 aa9.53□□□□□ -0.88
ERVK-28-203ENST00000600419 BAZ1AQ9NRL2 1556 aaPredicted RBP9.49□□□□□ -0.89
ERVK-28-203ENST00000600419 RSF1Q96T23 1441 aaPredicted RBP9.44□□□□□ -0.9
ERVK-28-203ENST00000600419 SMARCA4P51532 1647 aa9.43□□□□□ -0.9
ERVK-28-203ENST00000600419 CECR2Q9BXF3 1484 aa9.41□□□□□ -0.9
ERVK-28-203ENST00000600419 PABPN1Q86U42 306 aaKnown RBP eCLIP9.41□□□□□ -0.9
ERVK-28-203ENST00000600419 MROH2BQ7Z745 1585 aa9.4□□□□□ -0.9
ERVK-28-203ENST00000600419 WIZO95785 1651 aa9.37□□□□□ -0.91
ERVK-28-203ENST00000600419 PEG3Q9GZU2 1588 aa9.32□□□□□ -0.92
ERVK-28-203ENST00000600419 SMARCA2P51531 1590 aa9.31□□□□□ -0.92
ERVK-28-203ENST00000600419 TOP2AP11388 1531 aaKnown RBP9.3□□□□□ -0.92
ERVK-28-203ENST00000600419 EIF4G1Q04637 1599 aaKnown RBP9.28□□□□□ -0.92
ERVK-28-203ENST00000600419 ATAD2BQ9ULI0 1458 aa9.22□□□□□ -0.93
ERVK-28-203ENST00000600419 BAZ1BQ9UIG0 1483 aaKnown RBP9.21□□□□□ -0.93
ERVK-28-203ENST00000600419 HMGXB3Q12766 1538 aa9.21□□□□□ -0.94
ERVK-28-203ENST00000600419 NCAPD3P42695 1498 aa9.16□□□□□ -0.94
ERVK-28-203ENST00000600419 CCDC88BA6NC98 1476 aa9.15□□□□□ -0.95
ERVK-28-203ENST00000600419 CC2D2AQ9P2K1 1620 aa9.14□□□□□ -0.95
ERVK-28-203ENST00000600419 CHIC1Q5VXU3 224 aa9.12□□□□□ -0.95
ERVK-28-203ENST00000600419 PRDM2Q13029 1718 aa9.1□□□□□ -0.95
ERVK-28-203ENST00000600419 TRIM41Q8WV44 630 aa9.02□□□□□ -0.97
ERVK-28-203ENST00000600419 CFTRP13569 1480 aa8.96□□□□□ -0.98
ERVK-28-203ENST00000600419 ABCC8Q09428 1581 aa8.95□□□□□ -0.98
ERVK-28-203ENST00000600419 LAMC3Q9Y6N6 1575 aa8.93□□□□□ -0.98
ERVK-28-203ENST00000600419 WRNQ14191 1432 aaPredicted RBP eCLIP8.92□□□□□ -0.98
ERVK-28-203ENST00000600419 CADPSQ9ULU8 1353 aa8.92□□□□□ -0.98
ERVK-28-203ENST00000600419 BIVM-ERCC5R4GMW8 1640 aa8.91□□□□□ -0.98
ERVK-28-203ENST00000600419 TOP2BQ02880 1626 aa8.89□□□□□ -0.99
ERVK-28-203ENST00000600419 EEA1Q15075 1411 aa8.88□□□□□ -0.99
ERVK-28-203ENST00000600419 SYNJ1O43426 1573 aa8.87□□□□□ -0.99
ERVK-28-203ENST00000600419 FANCD2Q9BXW9 1451 aa8.83□□□□□ -1
ERVK-28-203ENST00000600419 PDS5BQ9NTI5 1447 aa8.83□□□□□ -1
ERVK-28-203ENST00000600419 CEP164Q9UPV0 1460 aa8.82□□□□□ -1
ERVK-28-203ENST00000600419 CUX1P39880 1505 aa8.81□□□□□ -1
ERVK-28-203ENST00000600419 DNMBPQ6XZF7 1577 aa8.8□□□□□ -1
ERVK-28-203ENST00000600419 KIF21AQ7Z4S6 1674 aa8.8□□□□□ -1
ERVK-28-203ENST00000600419 FAM9AQ8IZU1 332 aaPredicted RBP8.78□□□□□ -1
ERVK-28-203ENST00000600419 NESP48681 1621 aa8.78□□□□□ -1
ERVK-28-203ENST00000600419 SOGA1O94964 1423 aa8.74□□□□□ -1.01
ERVK-28-203ENST00000600419 KIF21BO75037 1637 aa8.74□□□□□ -1.01
ERVK-28-203ENST00000600419 CSRNP3Q8WYN3 585 aa8.74□□□□□ -1.01
ERVK-28-203ENST00000600419 TOPBP1Q92547 1522 aa8.74□□□□□ -1.01
ERVK-28-203ENST00000600419 KIF27Q86VH2 1401 aa8.73□□□□□ -1.01
ERVK-28-203ENST00000600419 LOC105371045A0A1W2PR82 267 aa8.73□□□□□ -1.01
ERVK-28-203ENST00000600419 DNAJC5BQ9UF47 199 aa8.73□□□□□ -1.01
ERVK-28-203ENST00000600419 FGD5Q6ZNL6 1462 aa8.72□□□□□ -1.01
ERVK-28-203ENST00000600419 GOLGA3Q08378 1498 aa8.71□□□□□ -1.01
ERVK-28-203ENST00000600419 MRC2Q9UBG0 1479 aa8.7□□□□□ -1.02
ERVK-28-203ENST00000600419 URB2Q14146 1524 aaKnown RBP8.69□□□□□ -1.02
ERVK-28-203ENST00000600419 ERICH3Q5RHP9 1530 aa8.69□□□□□ -1.02
ERVK-28-203ENST00000600419 RUSC2Q8N2Y8 1516 aa8.69□□□□□ -1.02
ERVK-28-203ENST00000600419 WDR97A6NE52 1622 aa8.69□□□□□ -1.02
ERVK-28-203ENST00000600419 POLA1P09884 1462 aaPredicted RBP8.68□□□□□ -1.02
ERVK-28-203ENST00000600419 ERCC6Q03468 1493 aa8.68□□□□□ -1.02
ERVK-28-203ENST00000600419 CUX2O14529 1486 aa8.67□□□□□ -1.02
ERVK-28-203ENST00000600419 ABCA10Q8WWZ4 1543 aa8.67□□□□□ -1.02
ERVK-28-203ENST00000600419 TNIKQ9UKE5 1360 aa8.66□□□□□ -1.02
ERVK-28-203ENST00000600419 CUL7Q14999 1698 aa8.65□□□□□ -1.02
ERVK-28-203ENST00000600419 UBTFP17480 764 aaKnown RBP8.65□□□□□ -1.02
ERVK-28-203ENST00000600419 WDR62O43379 1518 aa8.64□□□□□ -1.03
ERVK-28-203ENST00000600419 TARBP1Q13395 1621 aaKnown RBP8.62□□□□□ -1.03
ERVK-28-203ENST00000600419 ABCA5Q8WWZ7 1642 aa8.62□□□□□ -1.03
ERVK-28-203ENST00000600419 THOC2Q8NI27 1593 aaKnown RBP8.62□□□□□ -1.03
ERVK-28-203ENST00000600419 EHMT2Q96KQ7 1210 aa8.62□□□□□ -1.03
ERVK-28-203ENST00000600419 PRXQ9BXM0 1461 aa8.62□□□□□ -1.03
ERVK-28-203ENST00000600419 PBRM1Q86U86 1689 aa8.62□□□□□ -1.03
ERVK-28-203ENST00000600419 RAD54L2Q9Y4B4 1467 aa8.61□□□□□ -1.03
ERVK-28-203ENST00000600419 IFT140Q96RY7 1462 aa8.6□□□□□ -1.03
ERVK-28-203ENST00000600419 CEP162Q5TB80 1403 aa8.6□□□□□ -1.03
ERVK-28-203ENST00000600419 GAPVD1Q14C86 1478 aa8.59□□□□□ -1.03
ERVK-28-203ENST00000600419 RAPGEF2Q9Y4G8 1499 aa8.59□□□□□ -1.03
ERVK-28-203ENST00000600419 CTTNBP2Q8WZ74 1663 aa8.59□□□□□ -1.03
ERVK-28-203ENST00000600419 IGF1RP08069 1367 aa8.58□□□□□ -1.04
ERVK-28-203ENST00000600419 CARMIL1Q5VZK9 1371 aa8.58□□□□□ -1.04
ERVK-28-203ENST00000600419 CLIP1P30622 1438 aa8.54□□□□□ -1.04
ERVK-28-203ENST00000600419 GRIN2BQ13224 1484 aa8.53□□□□□ -1.04
ERVK-28-203ENST00000600419 TDRD9Q8NDG6 1382 aaKnown RBP8.52□□□□□ -1.05
ERVK-28-203ENST00000600419 EIF4G3O43432 1585 aaKnown RBP8.52□□□□□ -1.05
ERVK-28-203ENST00000600419 ADAMTS12P58397 1594 aa8.51□□□□□ -1.05
ERVK-28-203ENST00000600419 FHAD1B1AJZ9 1412 aa8.5□□□□□ -1.05
ERVK-28-203ENST00000600419 EFCAB5A4FU69 1503 aa8.49□□□□□ -1.05
ERVK-28-203ENST00000600419 MAGI1Q96QZ7 1491 aaPredicted RBP8.48□□□□□ -1.05
ERVK-28-203ENST00000600419 VPS8Q8N3P4 1428 aa8.47□□□□□ -1.05
ERVK-28-203ENST00000600419 AQRO60306 1485 aaKnown RBP eCLIP8.47□□□□□ -1.05
ERVK-28-203ENST00000600419 APLP2Q06481 763 aa8.47□□□□□ -1.05
ERVK-28-203ENST00000600419 ZNF608Q9ULD9 1512 aaPredicted RBP8.45□□□□□ -1.06
ERVK-28-203ENST00000600419 TRIM26Q12899 539 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms