RNA–Protein interactions for RNA: ENST00000494925.1

ABCA17P-204, Transcript of ATP binding cassette subfamily A member 17, pseudogene, humanhuman

BASIC

Gene ABCA17P, Length 3,478 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA17P-204ENST00000494925 NISCHQ9Y2I1 1504 aa18.13■□□□□ 0.49
ABCA17P-204ENST00000494925 DCAF8L2P0C7V8 631 aa16.03■□□□□ 0.16
ABCA17P-204ENST00000494925 ABCC9O60706 1549 aa15.85■□□□□ 0.13
ABCA17P-204ENST00000494925 CCDC180Q9P1Z9 1646 aa15.66■□□□□ 0.1
ABCA17P-204ENST00000494925 SHROOM4Q9ULL8 1493 aa15.25■□□□□ 0.03
ABCA17P-204ENST00000494925 PABPN1Q86U42 306 aaKnown RBP eCLIP15.1■□□□□ 0.01
ABCA17P-204ENST00000494925 ZCCHC6Q5VYS8 1495 aaKnown RBP15.07■□□□□ 0
ABCA17P-204ENST00000494925 RB1CC1Q8TDY2 1594 aa14.91□□□□□ -0.02
ABCA17P-204ENST00000494925 NACADO15069 1562 aa14.85□□□□□ -0.03
ABCA17P-204ENST00000494925 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
ABCA17P-204ENST00000494925 DCAF1Q9Y4B6 1507 aa14.67□□□□□ -0.06
ABCA17P-204ENST00000494925 MYO15BQ96JP2 1530 aa14.58□□□□□ -0.08
ABCA17P-204ENST00000494925 SUPT5HO00267 1087 aaKnown RBP14.54□□□□□ -0.08
ABCA17P-204ENST00000494925 UNC13AQ9UPW8 1703 aa14.41□□□□□ -0.1
ABCA17P-204ENST00000494925 DNAJC5BQ9UF47 199 aa14.4□□□□□ -0.1
ABCA17P-204ENST00000494925 BICRAQ9NZM4 1560 aa14.4□□□□□ -0.1
ABCA17P-204ENST00000494925 CECR2Q9BXF3 1484 aa14.33□□□□□ -0.12
ABCA17P-204ENST00000494925 EIF4G1Q04637 1599 aaKnown RBP14.11□□□□□ -0.15
ABCA17P-204ENST00000494925 MROH2BQ7Z745 1585 aa14.11□□□□□ -0.15
ABCA17P-204ENST00000494925 RSF1Q96T23 1441 aaPredicted RBP14.04□□□□□ -0.16
ABCA17P-204ENST00000494925 CC2D2AQ9P2K1 1620 aa14.04□□□□□ -0.16
ABCA17P-204ENST00000494925 BAZ1AQ9NRL2 1556 aaPredicted RBP14.01□□□□□ -0.17
ABCA17P-204ENST00000494925 SMARCA4P51532 1647 aa13.97□□□□□ -0.17
ABCA17P-204ENST00000494925 ATAD2BQ9ULI0 1458 aa13.95□□□□□ -0.18
ABCA17P-204ENST00000494925 WIZO95785 1651 aa13.94□□□□□ -0.18
ABCA17P-204ENST00000494925 BAZ1BQ9UIG0 1483 aaKnown RBP13.94□□□□□ -0.18
ABCA17P-204ENST00000494925 SMARCA2P51531 1590 aa13.83□□□□□ -0.2
ABCA17P-204ENST00000494925 NCAPD3P42695 1498 aa13.79□□□□□ -0.2
ABCA17P-204ENST00000494925 NESP48681 1621 aa13.72□□□□□ -0.21
ABCA17P-204ENST00000494925 CCDC88BA6NC98 1476 aa13.69□□□□□ -0.22
ABCA17P-204ENST00000494925 TOP2AP11388 1531 aaKnown RBP13.66□□□□□ -0.22
ABCA17P-204ENST00000494925 EHMT2Q96KQ7 1210 aa13.65□□□□□ -0.23
ABCA17P-204ENST00000494925 ERCC6Q03468 1493 aa13.64□□□□□ -0.23
ABCA17P-204ENST00000494925 HMGXB3Q12766 1538 aa13.62□□□□□ -0.23
ABCA17P-204ENST00000494925 CADPSQ9ULU8 1353 aa13.59□□□□□ -0.23
ABCA17P-204ENST00000494925 PEG3Q9GZU2 1588 aa13.58□□□□□ -0.24
ABCA17P-204ENST00000494925 FAM9AQ8IZU1 332 aaPredicted RBP13.56□□□□□ -0.24
ABCA17P-204ENST00000494925 CHIC1Q5VXU3 224 aa13.52□□□□□ -0.25
ABCA17P-204ENST00000494925 TRIM41Q8WV44 630 aa13.52□□□□□ -0.25
ABCA17P-204ENST00000494925 PDS5BQ9NTI5 1447 aa13.47□□□□□ -0.25
ABCA17P-204ENST00000494925 FANCD2Q9BXW9 1451 aa13.45□□□□□ -0.26
ABCA17P-204ENST00000494925 HRCP23327 699 aa13.43□□□□□ -0.26
ABCA17P-204ENST00000494925 CFTRP13569 1480 aa13.42□□□□□ -0.26
ABCA17P-204ENST00000494925 ABCC8Q09428 1581 aa13.39□□□□□ -0.27
ABCA17P-204ENST00000494925 CEP164Q9UPV0 1460 aa13.39□□□□□ -0.27
ABCA17P-204ENST00000494925 FBLN2P98095 1184 aa13.38□□□□□ -0.27
ABCA17P-204ENST00000494925 RANGAP1P46060 587 aaPredicted RBP13.34□□□□□ -0.27
ABCA17P-204ENST00000494925 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
ABCA17P-204ENST00000494925 LAMC3Q9Y6N6 1575 aa13.33□□□□□ -0.28
ABCA17P-204ENST00000494925 WRNQ14191 1432 aaPredicted RBP eCLIP13.31□□□□□ -0.28
ABCA17P-204ENST00000494925 TDRD9Q8NDG6 1382 aaKnown RBP13.28□□□□□ -0.28
ABCA17P-204ENST00000494925 KIF21AQ7Z4S6 1674 aa13.27□□□□□ -0.29
ABCA17P-204ENST00000494925 PCGF6Q9BYE7 350 aa13.25□□□□□ -0.29
ABCA17P-204ENST00000494925 MRC2Q9UBG0 1479 aa13.24□□□□□ -0.29
ABCA17P-204ENST00000494925 RAD54L2Q9Y4B4 1467 aa13.24□□□□□ -0.29
ABCA17P-204ENST00000494925 URB2Q14146 1524 aaKnown RBP13.24□□□□□ -0.29
ABCA17P-204ENST00000494925 TTBK1Q5TCY1 1321 aaPredicted RBP13.23□□□□□ -0.29
ABCA17P-204ENST00000494925 SOGA1O94964 1423 aa13.21□□□□□ -0.29
ABCA17P-204ENST00000494925 TOPBP1Q92547 1522 aa13.19□□□□□ -0.3
ABCA17P-204ENST00000494925 FGD5Q6ZNL6 1462 aa13.18□□□□□ -0.3
ABCA17P-204ENST00000494925 CUX1P39880 1505 aa13.17□□□□□ -0.3
ABCA17P-204ENST00000494925 AQRO60306 1485 aaKnown RBP eCLIP13.17□□□□□ -0.3
ABCA17P-204ENST00000494925 PPARGC1BQ86YN6 1023 aaKnown RBP13.16□□□□□ -0.3
ABCA17P-204ENST00000494925 LOC105371045A0A1W2PR82 267 aa13.15□□□□□ -0.3
ABCA17P-204ENST00000494925 SYNJ1O43426 1573 aa13.14□□□□□ -0.31
ABCA17P-204ENST00000494925 CUX2O14529 1486 aa13.14□□□□□ -0.31
ABCA17P-204ENST00000494925 POLA1P09884 1462 aaPredicted RBP13.13□□□□□ -0.31
ABCA17P-204ENST00000494925 ZNF608Q9ULD9 1512 aaPredicted RBP13.13□□□□□ -0.31
ABCA17P-204ENST00000494925 CHMP7Q8WUX9 453 aaPredicted RBP13.12□□□□□ -0.31
ABCA17P-204ENST00000494925 UBTFP17480 764 aaKnown RBP13.12□□□□□ -0.31
ABCA17P-204ENST00000494925 RUSC2Q8N2Y8 1516 aa13.08□□□□□ -0.32
ABCA17P-204ENST00000494925 DNMBPQ6XZF7 1577 aa13.08□□□□□ -0.32
ABCA17P-204ENST00000494925 THOC2Q8NI27 1593 aaKnown RBP13.06□□□□□ -0.32
ABCA17P-204ENST00000494925 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
ABCA17P-204ENST00000494925 WDR62O43379 1518 aa13.03□□□□□ -0.32
ABCA17P-204ENST00000494925 P3H3Q8IVL6 736 aa13.01□□□□□ -0.33
ABCA17P-204ENST00000494925 IFT140Q96RY7 1462 aa13□□□□□ -0.33
ABCA17P-204ENST00000494925 KIF27Q86VH2 1401 aa13□□□□□ -0.33
ABCA17P-204ENST00000494925 GAPVD1Q14C86 1478 aa12.98□□□□□ -0.33
ABCA17P-204ENST00000494925 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
ABCA17P-204ENST00000494925 ATP1B4Q9UN42 357 aaPredicted RBP12.97□□□□□ -0.33
ABCA17P-204ENST00000494925 PRDM2Q13029 1718 aa12.97□□□□□ -0.33
ABCA17P-204ENST00000494925 ARID3CA6NKF2 412 aa12.95□□□□□ -0.34
ABCA17P-204ENST00000494925 TRIM26Q12899 539 aaPredicted RBP12.95□□□□□ -0.34
ABCA17P-204ENST00000494925 OSCARQ8IYS5 282 aa12.93□□□□□ -0.34
ABCA17P-204ENST00000494925 CARMIL1Q5VZK9 1371 aa12.93□□□□□ -0.34
ABCA17P-204ENST00000494925 SNAPC4Q5SXM2 1469 aa12.92□□□□□ -0.34
ABCA17P-204ENST00000494925 IGF1RP08069 1367 aa12.92□□□□□ -0.34
ABCA17P-204ENST00000494925 MYT1Q01538 1121 aa12.92□□□□□ -0.34
ABCA17P-204ENST00000494925 ABCA10Q8WWZ4 1543 aa12.89□□□□□ -0.35
ABCA17P-204ENST00000494925 GRIN2BQ13224 1484 aa12.88□□□□□ -0.35
ABCA17P-204ENST00000494925 BIVM-ERCC5R4GMW8 1640 aa12.87□□□□□ -0.35
ABCA17P-204ENST00000494925 EIF4G3O43432 1585 aaKnown RBP12.87□□□□□ -0.35
ABCA17P-204ENST00000494925 TARBP1Q13395 1621 aaKnown RBP12.85□□□□□ -0.35
ABCA17P-204ENST00000494925 CYB5RLQ6IPT4 315 aa12.83□□□□□ -0.36
ABCA17P-204ENST00000494925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
ABCA17P-204ENST00000494925 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
ABCA17P-204ENST00000494925 RAPGEF2Q9Y4G8 1499 aa12.8□□□□□ -0.36
ABCA17P-204ENST00000494925 JPH4Q96JJ6 628 aa12.79□□□□□ -0.36
ABCA17P-204ENST00000494925 FHAD1B1AJZ9 1412 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms