RNA–Protein interactions for RNA: ENST00000384040.1

RNU6-949P-201, Transcript of RNA, U6 small nuclear 949, pseudogene, humanhuman

BASIC

Gene RNU6-949P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-949P-201ENST00000384040 AEBP2Q6ZN18 517 aaPredicted RBP8.18□□□□□ -1.1
RNU6-949P-201ENST00000384040 CHIC1Q5VXU3 224 aa7.69□□□□□ -1.18
RNU6-949P-201ENST00000384040 SENP3Q9H4L4 574 aaPredicted RBP6.94□□□□□ -1.3
RNU6-949P-201ENST00000384040 PHF23Q9BUL5 403 aaPredicted RBP6.87□□□□□ -1.31
RNU6-949P-201ENST00000384040 FOXD1Q16676 465 aa6.51□□□□□ -1.37
RNU6-949P-201ENST00000384040 PLPPR3Q6T4P5 718 aa6.12□□□□□ -1.43
RNU6-949P-201ENST00000384040 MSH5O43196 834 aa6.08□□□□□ -1.44
RNU6-949P-201ENST00000384040 PIAS4Q8N2W9 510 aaPredicted RBP6.07□□□□□ -1.44
RNU6-949P-201ENST00000384040 PPP6R1Q9UPN7 881 aa6.07□□□□□ -1.44
RNU6-949P-201ENST00000384040 ADRA2BP18089 450 aa6.04□□□□□ -1.44
RNU6-949P-201ENST00000384040 POTEDQ86YR6 584 aa6.04□□□□□ -1.44
RNU6-949P-201ENST00000384040 MAPK8IP2Q13387 824 aaPredicted RBP5.57□□□□□ -1.52
RNU6-949P-201ENST00000384040 DMRT2Q9Y5R5 561 aa5.5□□□□□ -1.53
RNU6-949P-201ENST00000384040 SCAF1Q9H7N4 1312 aaKnown RBP5.48□□□□□ -1.53
RNU6-949P-201ENST00000384040 PPP4R3CPQ6ZMV5 832 aa5.37□□□□□ -1.55
RNU6-949P-201ENST00000384040 DCAF8L1A6NGE4 600 aa5.32□□□□□ -1.56
RNU6-949P-201ENST00000384040 HOXD11P31277 338 aaPredicted RBP5.28□□□□□ -1.56
RNU6-949P-201ENST00000384040 CACNB1Q02641 598 aaPredicted RBP5.27□□□□□ -1.57
RNU6-949P-201ENST00000384040 CNKSR2Q8WXI2 1034 aa5.26□□□□□ -1.57
RNU6-949P-201ENST00000384040 RNF216Q9NWF9 866 aaPredicted RBP5.23□□□□□ -1.57
RNU6-949P-201ENST00000384040 RNF39Q9H2S5 420 aa5.19□□□□□ -1.58
RNU6-949P-201ENST00000384040 NCBP3Q53F19 620 aaKnown RBP5.12□□□□□ -1.59
RNU6-949P-201ENST00000384040 C1QBPQ07021 282 aaKnown RBP5.1□□□□□ -1.59
RNU6-949P-201ENST00000384040 NPM3O75607 178 aaKnown RBP5.08□□□□□ -1.6
RNU6-949P-201ENST00000384040 DNAJC5BQ9UF47 199 aa5.06□□□□□ -1.6
RNU6-949P-201ENST00000384040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.05□□□□□ -1.6
RNU6-949P-201ENST00000384040 KCNA4P22459 653 aa4.96□□□□□ -1.62
RNU6-949P-201ENST00000384040 U3KPZ7 1027 aaPredicted RBP4.94□□□□□ -1.62
RNU6-949P-201ENST00000384040 SPINK5Q9NQ38 1064 aaPredicted RBP4.9□□□□□ -1.63
RNU6-949P-201ENST00000384040 CAPN15O75808 1086 aa4.89□□□□□ -1.63
RNU6-949P-201ENST00000384040 SLC4A2P04920 1241 aa4.87□□□□□ -1.63
RNU6-949P-201ENST00000384040 DSG3P32926 999 aa4.86□□□□□ -1.63
RNU6-949P-201ENST00000384040 TRHP20396 242 aaPredicted RBP4.81□□□□□ -1.64
RNU6-949P-201ENST00000384040 ABCB7O75027 752 aa4.79□□□□□ -1.64
RNU6-949P-201ENST00000384040 ZNF219Q9P2Y4 722 aaPredicted RBP4.76□□□□□ -1.65
RNU6-949P-201ENST00000384040 APLP2Q06481 763 aa4.75□□□□□ -1.65
RNU6-949P-201ENST00000384040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.74□□□□□ -1.65
RNU6-949P-201ENST00000384040 HNRNPUL2Q1KMD3 747 aaKnown RBP4.74□□□□□ -1.65
RNU6-949P-201ENST00000384040 POTEHQ6S545 545 aa4.72□□□□□ -1.65
RNU6-949P-201ENST00000384040 SAMD1Q6SPF0 538 aaPredicted RBP4.72□□□□□ -1.65
RNU6-949P-201ENST00000384040 MYCNP04198 464 aaPredicted RBP4.68□□□□□ -1.66
RNU6-949P-201ENST00000384040 POLA2Q14181 598 aa4.66□□□□□ -1.66
RNU6-949P-201ENST00000384040 SLC4A1APQ9BWU0 796 aaKnown RBP4.65□□□□□ -1.67
RNU6-949P-201ENST00000384040 ATF5Q9Y2D1 282 aaPredicted RBP4.63□□□□□ -1.67
RNU6-949P-201ENST00000384040 FOXD4L1Q9NU39 408 aa4.62□□□□□ -1.67
RNU6-949P-201ENST00000384040 RBM42Q9BTD8 480 aaKnown RBP4.61□□□□□ -1.67
RNU6-949P-201ENST00000384040 ZBTB22O15209 634 aa4.57□□□□□ -1.68
RNU6-949P-201ENST00000384040 CHRDL2Q6WN34 429 aa4.55□□□□□ -1.68
RNU6-949P-201ENST00000384040 OSCARQ8IYS5 282 aa4.52□□□□□ -1.69
RNU6-949P-201ENST00000384040 ZBTB12Q9Y330 459 aaPredicted RBP4.51□□□□□ -1.69
RNU6-949P-201ENST00000384040 AKT1S1Q96B36 256 aa4.49□□□□□ -1.69
RNU6-949P-201ENST00000384040 REM2Q8IYK8 340 aaPredicted RBP4.47□□□□□ -1.69
RNU6-949P-201ENST00000384040 ATXN8OSP0DMR3 200 aa4.44□□□□□ -1.7
RNU6-949P-201ENST00000384040 PITPNM1O00562 1244 aa4.43□□□□□ -1.7
RNU6-949P-201ENST00000384040 PIP4P2Q8N4L2 257 aa4.43□□□□□ -1.7
RNU6-949P-201ENST00000384040 FBLN2P98095 1184 aa4.4□□□□□ -1.71
RNU6-949P-201ENST00000384040 SP7Q8TDD2 431 aaPredicted RBP4.4□□□□□ -1.71
RNU6-949P-201ENST00000384040 FXR2P51116 673 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU6-949P-201ENST00000384040 MKRN4PQ13434 485 aaPredicted RBP4.39□□□□□ -1.71
RNU6-949P-201ENST00000384040 SPDYE2BA6NHP3 402 aa4.38□□□□□ -1.71
RNU6-949P-201ENST00000384040 HAX1O00165 279 aa4.38□□□□□ -1.71
RNU6-949P-201ENST00000384040 SPDYE6P0CI01 402 aa4.38□□□□□ -1.71
RNU6-949P-201ENST00000384040 SPDYE2Q495Y8 402 aa4.38□□□□□ -1.71
RNU6-949P-201ENST00000384040 CLEC11AQ9Y240 323 aa4.36□□□□□ -1.71
RNU6-949P-201ENST00000384040 EVX2Q03828 476 aa4.34□□□□□ -1.71
RNU6-949P-201ENST00000384040 ZNF692Q9BU19 519 aaPredicted RBP4.34□□□□□ -1.71
RNU6-949P-201ENST00000384040 PRKAR2AP13861 404 aaKnown RBP4.32□□□□□ -1.72
RNU6-949P-201ENST00000384040 SPDYE1Q8NFV5 336 aaPredicted RBP4.32□□□□□ -1.72
RNU6-949P-201ENST00000384040 SSUH2Q9Y2M2 353 aa4.32□□□□□ -1.72
RNU6-949P-201ENST00000384040 CSRNP3Q8WYN3 585 aa4.3□□□□□ -1.72
RNU6-949P-201ENST00000384040 CHADLQ6NUI6 762 aa4.29□□□□□ -1.72
RNU6-949P-201ENST00000384040 PABPN1Q86U42 306 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNU6-949P-201ENST00000384040 C19orf67A6NJJ6 358 aa4.25□□□□□ -1.73
RNU6-949P-201ENST00000384040 PRR29P0C7W0 189 aa4.25□□□□□ -1.73
RNU6-949P-201ENST00000384040 EHMT2Q96KQ7 1210 aa4.25□□□□□ -1.73
RNU6-949P-201ENST00000384040 GABBR2O75899 941 aa4.21□□□□□ -1.74
RNU6-949P-201ENST00000384040 CD44P16070 742 aaKnown RBP4.18□□□□□ -1.74
RNU6-949P-201ENST00000384040 FARP1Q9Y4F1 1045 aaPredicted RBP4.18□□□□□ -1.74
RNU6-949P-201ENST00000384040 SPDYE4A6NLX3 237 aa4.15□□□□□ -1.75
RNU6-949P-201ENST00000384040 POTEIP0CG38 1075 aa4.14□□□□□ -1.75
RNU6-949P-201ENST00000384040 CREBZFQ9NS37 354 aa4.14□□□□□ -1.75
RNU6-949P-201ENST00000384040 LHX8Q68G74 356 aa4.13□□□□□ -1.75
RNU6-949P-201ENST00000384040 ZRANB1Q9UGI0 708 aa4.12□□□□□ -1.75
RNU6-949P-201ENST00000384040 STAG3Q9UJ98 1225 aa4.12□□□□□ -1.75
RNU6-949P-201ENST00000384040 ZNF579Q8NAF0 562 aaKnown RBP4.09□□□□□ -1.75
RNU6-949P-201ENST00000384040 DCBLD2Q96PD2 775 aa4.09□□□□□ -1.75
RNU6-949P-201ENST00000384040 GALR2O43603 387 aaPredicted RBP4.08□□□□□ -1.76
RNU6-949P-201ENST00000384040 MNX1P50219 401 aaPredicted RBP4.07□□□□□ -1.76
RNU6-949P-201ENST00000384040 CLCN6P51797 869 aa4.07□□□□□ -1.76
RNU6-949P-201ENST00000384040 PAK3O75914 559 aaPredicted RBP4.06□□□□□ -1.76
RNU6-949P-201ENST00000384040 PHF12Q96QT6 1004 aa4.06□□□□□ -1.76
RNU6-949P-201ENST00000384040 NPM1P06748 294 aaKnown RBP eCLIP4.04□□□□□ -1.76
RNU6-949P-201ENST00000384040 PROM2Q8N271 834 aa4.02□□□□□ -1.77
RNU6-949P-201ENST00000384040 POTEB2H3BUK9 544 aa4.01□□□□□ -1.77
RNU6-949P-201ENST00000384040 PELP1Q8IZL8 1130 aaKnown RBP4.01□□□□□ -1.77
RNU6-949P-201ENST00000384040 TSPYL2Q9H2G4 693 aaPredicted RBP4.01□□□□□ -1.77
RNU6-949P-201ENST00000384040 MS4A3Q96HJ5 214 aa4□□□□□ -1.77
RNU6-949P-201ENST00000384040 OTUD5Q96G74 571 aa3.99□□□□□ -1.77
RNU6-949P-201ENST00000384040 ASTLQ6HA08 431 aaPredicted RBP3.97□□□□□ -1.77
RNU6-949P-201ENST00000384040 MIER1Q8N108 512 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms