RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 NISCHQ9Y2I1 1504 aa18.61■□□□□ 0.57
CCDC144B-201ENST00000285176 DCAF8L2P0C7V8 631 aa17.26■□□□□ 0.35
CCDC144B-201ENST00000285176 SHROOM4Q9ULL8 1493 aa16.63■□□□□ 0.25
CCDC144B-201ENST00000285176 SUPT5HO00267 1087 aaKnown RBP16.2■□□□□ 0.18
CCDC144B-201ENST00000285176 ABCC9O60706 1549 aa16.05■□□□□ 0.16
CCDC144B-201ENST00000285176 CCDC180Q9P1Z9 1646 aa15.62■□□□□ 0.09
CCDC144B-201ENST00000285176 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
CCDC144B-201ENST00000285176 ZCCHC6Q5VYS8 1495 aaKnown RBP15.49■□□□□ 0.07
CCDC144B-201ENST00000285176 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
CCDC144B-201ENST00000285176 SCRIBQ14160 1630 aa15.31■□□□□ 0.04
CCDC144B-201ENST00000285176 FAM9AQ8IZU1 332 aaPredicted RBP15.18■□□□□ 0.02
CCDC144B-201ENST00000285176 RB1CC1Q8TDY2 1594 aa14.93□□□□□ -0.02
CCDC144B-201ENST00000285176 TRIM41Q8WV44 630 aa14.89□□□□□ -0.03
CCDC144B-201ENST00000285176 NACADO15069 1562 aa14.88□□□□□ -0.03
CCDC144B-201ENST00000285176 CHIC1Q5VXU3 224 aa14.84□□□□□ -0.03
CCDC144B-201ENST00000285176 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
CCDC144B-201ENST00000285176 RANGAP1P46060 587 aaPredicted RBP14.82□□□□□ -0.04
CCDC144B-201ENST00000285176 DCAF1Q9Y4B6 1507 aa14.81□□□□□ -0.04
CCDC144B-201ENST00000285176 LOC105371045A0A1W2PR82 267 aa14.75□□□□□ -0.05
CCDC144B-201ENST00000285176 TTBK1Q5TCY1 1321 aaPredicted RBP14.72□□□□□ -0.05
CCDC144B-201ENST00000285176 RSF1Q96T23 1441 aaPredicted RBP14.7□□□□□ -0.06
CCDC144B-201ENST00000285176 MROH2BQ7Z745 1585 aa14.58□□□□□ -0.07
CCDC144B-201ENST00000285176 PPARGC1BQ86YN6 1023 aaKnown RBP14.57□□□□□ -0.08
CCDC144B-201ENST00000285176 MYO15BQ96JP2 1530 aa14.5□□□□□ -0.09
CCDC144B-201ENST00000285176 UBTFP17480 764 aaKnown RBP14.5□□□□□ -0.09
CCDC144B-201ENST00000285176 WIZO95785 1651 aa14.44□□□□□ -0.1
CCDC144B-201ENST00000285176 BAZ1AQ9NRL2 1556 aaPredicted RBP14.38□□□□□ -0.11
CCDC144B-201ENST00000285176 PCGF6Q9BYE7 350 aa14.35□□□□□ -0.11
CCDC144B-201ENST00000285176 BAZ1BQ9UIG0 1483 aaKnown RBP14.33□□□□□ -0.12
CCDC144B-201ENST00000285176 ATP1B4Q9UN42 357 aaPredicted RBP14.32□□□□□ -0.12
CCDC144B-201ENST00000285176 DNAJC5BQ9UF47 199 aa14.3□□□□□ -0.12
CCDC144B-201ENST00000285176 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
CCDC144B-201ENST00000285176 UNC13AQ9UPW8 1703 aa14.25□□□□□ -0.13
CCDC144B-201ENST00000285176 CCDC88BA6NC98 1476 aa14.23□□□□□ -0.13
CCDC144B-201ENST00000285176 SMARCA4P51532 1647 aa14.23□□□□□ -0.13
CCDC144B-201ENST00000285176 ATAD2BQ9ULI0 1458 aa14.18□□□□□ -0.14
CCDC144B-201ENST00000285176 ABCC8Q09428 1581 aa14.16□□□□□ -0.14
CCDC144B-201ENST00000285176 APLP2Q06481 763 aa14.15□□□□□ -0.14
CCDC144B-201ENST00000285176 FBLN2P98095 1184 aa14.13□□□□□ -0.15
CCDC144B-201ENST00000285176 EIF4G1Q04637 1599 aaKnown RBP14.1□□□□□ -0.15
CCDC144B-201ENST00000285176 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
CCDC144B-201ENST00000285176 P3H3Q8IVL6 736 aa14.09□□□□□ -0.15
CCDC144B-201ENST00000285176 TOP2AP11388 1531 aaKnown RBP14.05□□□□□ -0.16
CCDC144B-201ENST00000285176 SMARCA2P51531 1590 aa14.04□□□□□ -0.16
CCDC144B-201ENST00000285176 WRNQ14191 1432 aaPredicted RBP eCLIP14.03□□□□□ -0.16
CCDC144B-201ENST00000285176 ARID3CA6NKF2 412 aa14.03□□□□□ -0.16
CCDC144B-201ENST00000285176 SOGA1O94964 1423 aa14.01□□□□□ -0.17
CCDC144B-201ENST00000285176 ITGAEP38570 1179 aa13.96□□□□□ -0.17
CCDC144B-201ENST00000285176 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
CCDC144B-201ENST00000285176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
CCDC144B-201ENST00000285176 HNRNPUL2Q1KMD3 747 aaKnown RBP13.93□□□□□ -0.18
CCDC144B-201ENST00000285176 NESP48681 1621 aa13.92□□□□□ -0.18
CCDC144B-201ENST00000285176 RUSC2Q8N2Y8 1516 aa13.9□□□□□ -0.18
CCDC144B-201ENST00000285176 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
CCDC144B-201ENST00000285176 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
CCDC144B-201ENST00000285176 ERCC6Q03468 1493 aa13.85□□□□□ -0.19
CCDC144B-201ENST00000285176 TDRD9Q8NDG6 1382 aaKnown RBP13.82□□□□□ -0.2
CCDC144B-201ENST00000285176 TRIM26Q12899 539 aaPredicted RBP13.8□□□□□ -0.2
CCDC144B-201ENST00000285176 CUX2O14529 1486 aa13.77□□□□□ -0.21
CCDC144B-201ENST00000285176 CCER1Q8TC90 406 aaPredicted RBP13.75□□□□□ -0.21
CCDC144B-201ENST00000285176 FANCD2Q9BXW9 1451 aa13.75□□□□□ -0.21
CCDC144B-201ENST00000285176 CHMP7Q8WUX9 453 aaPredicted RBP13.71□□□□□ -0.22
CCDC144B-201ENST00000285176 RAD54L2Q9Y4B4 1467 aa13.69□□□□□ -0.22
CCDC144B-201ENST00000285176 KIF27Q86VH2 1401 aa13.69□□□□□ -0.22
CCDC144B-201ENST00000285176 PDS5BQ9NTI5 1447 aa13.68□□□□□ -0.22
CCDC144B-201ENST00000285176 CEP162Q5TB80 1403 aa13.67□□□□□ -0.22
CCDC144B-201ENST00000285176 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
CCDC144B-201ENST00000285176 FAM50AQ14320 339 aaKnown RBP13.66□□□□□ -0.22
CCDC144B-201ENST00000285176 CFTRP13569 1480 aa13.64□□□□□ -0.23
CCDC144B-201ENST00000285176 CEP164Q9UPV0 1460 aa13.64□□□□□ -0.23
CCDC144B-201ENST00000285176 HMGXB3Q12766 1538 aa13.64□□□□□ -0.23
CCDC144B-201ENST00000285176 CLIP1P30622 1438 aa13.64□□□□□ -0.23
CCDC144B-201ENST00000285176 CARMIL1Q5VZK9 1371 aa13.61□□□□□ -0.23
CCDC144B-201ENST00000285176 RAPGEF2Q9Y4G8 1499 aa13.61□□□□□ -0.23
CCDC144B-201ENST00000285176 GOLGA3Q08378 1498 aa13.61□□□□□ -0.23
CCDC144B-201ENST00000285176 FGD5Q6ZNL6 1462 aa13.61□□□□□ -0.23
CCDC144B-201ENST00000285176 PEG3Q9GZU2 1588 aa13.59□□□□□ -0.23
CCDC144B-201ENST00000285176 CUX1P39880 1505 aa13.56□□□□□ -0.24
CCDC144B-201ENST00000285176 AQRO60306 1485 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCDC144B-201ENST00000285176 EEA1Q15075 1411 aa13.53□□□□□ -0.24
CCDC144B-201ENST00000285176 TNIKQ9UKE5 1360 aa13.53□□□□□ -0.24
CCDC144B-201ENST00000285176 MYT1LQ9UL68 1186 aa13.52□□□□□ -0.25
CCDC144B-201ENST00000285176 ZNF777Q9ULD5 760 aaPredicted RBP13.51□□□□□ -0.25
CCDC144B-201ENST00000285176 IGF1RP08069 1367 aa13.48□□□□□ -0.25
CCDC144B-201ENST00000285176 KANK4Q5T7N3 995 aaPredicted RBP13.47□□□□□ -0.25
CCDC144B-201ENST00000285176 HRCP23327 699 aa13.45□□□□□ -0.26
CCDC144B-201ENST00000285176 TOPBP1Q92547 1522 aa13.45□□□□□ -0.26
CCDC144B-201ENST00000285176 POLA1P09884 1462 aaPredicted RBP13.45□□□□□ -0.26
CCDC144B-201ENST00000285176 CHIC2Q9UKJ5 165 aa13.43□□□□□ -0.26
CCDC144B-201ENST00000285176 KCNH8Q96L42 1107 aa13.41□□□□□ -0.26
CCDC144B-201ENST00000285176 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
CCDC144B-201ENST00000285176 FHOD3Q2V2M9 1422 aa13.39□□□□□ -0.27
CCDC144B-201ENST00000285176 URB2Q14146 1524 aaKnown RBP13.39□□□□□ -0.27
CCDC144B-201ENST00000285176 GAPVD1Q14C86 1478 aa13.39□□□□□ -0.27
CCDC144B-201ENST00000285176 ZEB1P37275 1124 aaPredicted RBP13.37□□□□□ -0.27
CCDC144B-201ENST00000285176 NEUROD1Q13562 356 aa13.36□□□□□ -0.27
CCDC144B-201ENST00000285176 TRIM52Q96A61 297 aa13.35□□□□□ -0.27
CCDC144B-201ENST00000285176 MTUS2Q5JR59 1369 aa13.35□□□□□ -0.27
CCDC144B-201ENST00000285176 ZNF608Q9ULD9 1512 aaPredicted RBP13.34□□□□□ -0.27
CCDC144B-201ENST00000285176 MRC2Q9UBG0 1479 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms