RNA–Protein interactions for RNA: ENST00000551295.6

CNTN1-208, Transcript of contactin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTN1, Length 5,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-208ENST00000551295 NISCHQ9Y2I1 1504 aa10.94□□□□□ -0.66
CNTN1-208ENST00000551295 DCAF8L2P0C7V8 631 aa10.39□□□□□ -0.75
CNTN1-208ENST00000551295 SUPT5HO00267 1087 aaKnown RBP9.7□□□□□ -0.86
CNTN1-208ENST00000551295 SHROOM4Q9ULL8 1493 aa9.63□□□□□ -0.87
CNTN1-208ENST00000551295 FAM9AQ8IZU1 332 aaPredicted RBP9.62□□□□□ -0.87
CNTN1-208ENST00000551295 APLP2Q06481 763 aa9.41□□□□□ -0.9
CNTN1-208ENST00000551295 CCDC180Q9P1Z9 1646 aa9.34□□□□□ -0.91
CNTN1-208ENST00000551295 ABCC9O60706 1549 aa9.26□□□□□ -0.93
CNTN1-208ENST00000551295 TRIM41Q8WV44 630 aa9.23□□□□□ -0.93
CNTN1-208ENST00000551295 ZCCHC6Q5VYS8 1495 aaKnown RBP9.09□□□□□ -0.95
CNTN1-208ENST00000551295 UBTFP17480 764 aaKnown RBP9.05□□□□□ -0.96
CNTN1-208ENST00000551295 RB1CC1Q8TDY2 1594 aa9.04□□□□□ -0.96
CNTN1-208ENST00000551295 NACADO15069 1562 aa9.02□□□□□ -0.97
CNTN1-208ENST00000551295 ZEB1P37275 1124 aaPredicted RBP9.02□□□□□ -0.97
CNTN1-208ENST00000551295 EHMT2Q96KQ7 1210 aa8.96□□□□□ -0.97
CNTN1-208ENST00000551295 DCAF1Q9Y4B6 1507 aa8.96□□□□□ -0.98
CNTN1-208ENST00000551295 PABPN1Q86U42 306 aaKnown RBP eCLIP8.95□□□□□ -0.98
CNTN1-208ENST00000551295 PELP1Q8IZL8 1130 aaKnown RBP8.95□□□□□ -0.98
CNTN1-208ENST00000551295 ATP1B4Q9UN42 357 aaPredicted RBP8.91□□□□□ -0.98
CNTN1-208ENST00000551295 SCRIBQ14160 1630 aa8.89□□□□□ -0.99
CNTN1-208ENST00000551295 MYO15BQ96JP2 1530 aa8.83□□□□□ -1
CNTN1-208ENST00000551295 CHIC1Q5VXU3 224 aa8.82□□□□□ -1
CNTN1-208ENST00000551295 RANGAP1P46060 587 aaPredicted RBP8.81□□□□□ -1
CNTN1-208ENST00000551295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.76□□□□□ -1.01
CNTN1-208ENST00000551295 HNRNPUL2Q1KMD3 747 aaKnown RBP8.76□□□□□ -1.01
CNTN1-208ENST00000551295 CCER1Q8TC90 406 aaPredicted RBP8.76□□□□□ -1.01
CNTN1-208ENST00000551295 TRIM26Q12899 539 aaPredicted RBP8.73□□□□□ -1.01
CNTN1-208ENST00000551295 PCGF6Q9BYE7 350 aa8.72□□□□□ -1.01
CNTN1-208ENST00000551295 MYT1LQ9UL68 1186 aa8.69□□□□□ -1.02
CNTN1-208ENST00000551295 BAZ1AQ9NRL2 1556 aaPredicted RBP8.68□□□□□ -1.02
CNTN1-208ENST00000551295 CDK11AQ9UQ88 783 aaPredicted RBP8.67□□□□□ -1.02
CNTN1-208ENST00000551295 TTBK1Q5TCY1 1321 aaPredicted RBP8.67□□□□□ -1.02
CNTN1-208ENST00000551295 EEA1Q15075 1411 aa8.66□□□□□ -1.02
CNTN1-208ENST00000551295 CSRNP3Q8WYN3 585 aa8.65□□□□□ -1.02
CNTN1-208ENST00000551295 CENPBP07199 599 aaPredicted RBP8.64□□□□□ -1.03
CNTN1-208ENST00000551295 BAZ1BQ9UIG0 1483 aaKnown RBP8.64□□□□□ -1.03
CNTN1-208ENST00000551295 ACIN1Q9UKV3 1341 aaKnown RBP8.61□□□□□ -1.03
CNTN1-208ENST00000551295 SMARCA2P51531 1590 aa8.58□□□□□ -1.04
CNTN1-208ENST00000551295 RSF1Q96T23 1441 aaPredicted RBP8.57□□□□□ -1.04
CNTN1-208ENST00000551295 FBLN2P98095 1184 aa8.57□□□□□ -1.04
CNTN1-208ENST00000551295 NPM1P06748 294 aaKnown RBP eCLIP8.56□□□□□ -1.04
CNTN1-208ENST00000551295 LOC105371045A0A1W2PR82 267 aa8.5□□□□□ -1.05
CNTN1-208ENST00000551295 NEFLP07196 543 aa8.5□□□□□ -1.05
CNTN1-208ENST00000551295 FAM50AQ14320 339 aaKnown RBP8.5□□□□□ -1.05
CNTN1-208ENST00000551295 ITGAEP38570 1179 aa8.49□□□□□ -1.05
CNTN1-208ENST00000551295 KIF27Q86VH2 1401 aa8.48□□□□□ -1.05
CNTN1-208ENST00000551295 WRNQ14191 1432 aaPredicted RBP eCLIP8.47□□□□□ -1.05
CNTN1-208ENST00000551295 PDS5BQ9NTI5 1447 aa8.47□□□□□ -1.05
CNTN1-208ENST00000551295 CHMP7Q8WUX9 453 aaPredicted RBP8.46□□□□□ -1.05
CNTN1-208ENST00000551295 ERCC6Q03468 1493 aa8.46□□□□□ -1.06
CNTN1-208ENST00000551295 TRIM52Q96A61 297 aa8.44□□□□□ -1.06
CNTN1-208ENST00000551295 GOLGA3Q08378 1498 aa8.43□□□□□ -1.06
CNTN1-208ENST00000551295 ESF1Q9H501 851 aaKnown RBP8.41□□□□□ -1.06
CNTN1-208ENST00000551295 CEP164Q9UPV0 1460 aa8.4□□□□□ -1.06
CNTN1-208ENST00000551295 ABCC8Q09428 1581 aa8.38□□□□□ -1.07
CNTN1-208ENST00000551295 PPARGC1BQ86YN6 1023 aaKnown RBP8.38□□□□□ -1.07
CNTN1-208ENST00000551295 TOP2AP11388 1531 aaKnown RBP8.38□□□□□ -1.07
CNTN1-208ENST00000551295 HRCP23327 699 aa8.37□□□□□ -1.07
CNTN1-208ENST00000551295 CLIP1P30622 1438 aa8.35□□□□□ -1.07
CNTN1-208ENST00000551295 MTUS2Q5JR59 1369 aa8.35□□□□□ -1.07
CNTN1-208ENST00000551295 CECR2Q9BXF3 1484 aa8.35□□□□□ -1.07
CNTN1-208ENST00000551295 TSPY4P0CV99 314 aa8.34□□□□□ -1.07
CNTN1-208ENST00000551295 TSPY10P0CW01 314 aa8.34□□□□□ -1.07
CNTN1-208ENST00000551295 TNIKQ9UKE5 1360 aa8.33□□□□□ -1.08
CNTN1-208ENST00000551295 FHAD1B1AJZ9 1412 aa8.33□□□□□ -1.08
CNTN1-208ENST00000551295 PLEKHD1A6NEE1 506 aa8.32□□□□□ -1.08
CNTN1-208ENST00000551295 P3H3Q8IVL6 736 aa8.32□□□□□ -1.08
CNTN1-208ENST00000551295 CADPSQ9ULU8 1353 aa8.32□□□□□ -1.08
CNTN1-208ENST00000551295 MROH2BQ7Z745 1585 aa8.31□□□□□ -1.08
CNTN1-208ENST00000551295 ATAD2BQ9ULI0 1458 aa8.31□□□□□ -1.08
CNTN1-208ENST00000551295 SMARCA4P51532 1647 aa8.3□□□□□ -1.08
CNTN1-208ENST00000551295 POLR3GLQ9BT43 218 aa8.29□□□□□ -1.08
CNTN1-208ENST00000551295 ZNF777Q9ULD5 760 aaPredicted RBP8.29□□□□□ -1.08
CNTN1-208ENST00000551295 ERICH6Q7L0X2 663 aa8.29□□□□□ -1.08
CNTN1-208ENST00000551295 CARMIL2Q6F5E8 1435 aa8.29□□□□□ -1.08
CNTN1-208ENST00000551295 CCDC88BA6NC98 1476 aa8.29□□□□□ -1.08
CNTN1-208ENST00000551295 CARMIL1Q5VZK9 1371 aa8.27□□□□□ -1.09
CNTN1-208ENST00000551295 NEFMP07197 916 aa8.26□□□□□ -1.09
CNTN1-208ENST00000551295 SLC4A1APQ9BWU0 796 aaKnown RBP8.26□□□□□ -1.09
CNTN1-208ENST00000551295 CUX2O14529 1486 aa8.26□□□□□ -1.09
CNTN1-208ENST00000551295 NCAPD3P42695 1498 aa8.26□□□□□ -1.09
CNTN1-208ENST00000551295 SOGA1O94964 1423 aa8.24□□□□□ -1.09
CNTN1-208ENST00000551295 STAG3Q9UJ98 1225 aa8.24□□□□□ -1.09
CNTN1-208ENST00000551295 CEP162Q5TB80 1403 aa8.24□□□□□ -1.09
CNTN1-208ENST00000551295 TONSLQ96HA7 1378 aa8.23□□□□□ -1.09
CNTN1-208ENST00000551295 ANP32CO43423 234 aa8.23□□□□□ -1.09
CNTN1-208ENST00000551295 NEUROD1Q13562 356 aa8.22□□□□□ -1.09
CNTN1-208ENST00000551295 BCANQ96GW7 911 aa8.21□□□□□ -1.09
CNTN1-208ENST00000551295 SLC24A1O60721 1099 aa8.21□□□□□ -1.1
CNTN1-208ENST00000551295 FMN1Q68DA7 1419 aa8.2□□□□□ -1.1
CNTN1-208ENST00000551295 ARID3CA6NKF2 412 aa8.18□□□□□ -1.1
CNTN1-208ENST00000551295 CFDP1Q9UEE9 299 aaPredicted RBP8.17□□□□□ -1.1
CNTN1-208ENST00000551295 ZNF326Q5BKZ1 582 aaKnown RBP8.16□□□□□ -1.1
CNTN1-208ENST00000551295 DIEXFQ68CQ4 756 aaKnown RBP8.16□□□□□ -1.1
CNTN1-208ENST00000551295 FANCD2Q9BXW9 1451 aa8.16□□□□□ -1.1
CNTN1-208ENST00000551295 CLSPNQ9HAW4 1339 aa8.16□□□□□ -1.1
CNTN1-208ENST00000551295 HMGXB3Q12766 1538 aa8.16□□□□□ -1.1
CNTN1-208ENST00000551295 ZNF316A6NFI3 1004 aaPredicted RBP8.16□□□□□ -1.1
CNTN1-208ENST00000551295 DAXXQ9UER7 740 aaPredicted RBP8.16□□□□□ -1.1
CNTN1-208ENST00000551295 EIF4G1Q04637 1599 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms